Os09g0482740

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0482740| Description = Protein of unknown function DUF1664 family protein| Version = NM_001188972.1 GI:297727074 GeneID:9271634| Length = 4...")
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Gene Name

Os09g0482740

Description

Protein of unknown function DUF1664 family protein

Version

NM_001188972.1 GI:297727074 GeneID:9271634

Length

4319 bp

Definition

Oryza sativa Japonica Group Os09g0482740, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19230670..19234988

Sequence Coding Region

19230820..19230874,19231018..19231079,19231488..19231556,19231702..19231783,19232264..19232334
,19232938..19233039,19233129..19233218,19233858..19233932,19234028..19234060
,19234135..19234215,19234352..19234411,19234504..19234680

Expression

GEO Profiles:Os09g0482740

Genome Context

<gbrowseImage1> name=NC_008402:19230670..19234988 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19230670..19234988 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgcagacggggttcgccacctccaaggtcctcatcctcgtcggcgcagggttgacgagctcgatcgtgctgcggaatggccggctatctgacgtgttggcggagcttcaggagcttatgaaaggtgtaaaccaaggagaaggttcgagtgcctatgacatcgcccttcttcaatctcagattcgaaatttagcacaagaagttagagatttgactatatcaaggcctattaccatattgagtggcaactccgactctggaggcagtttatcctcctacatactgcctgcagctgcagttggagcaatgggttactgctatatgtggtggaagggattgtccttatcggatgtcatgtttgttaccaaacgcaacatgaccaaagctgttgagagtatgtcgaagcaattggatcaagtgtcttcagctttagctgcaacaaaaaggcatctaagtcagcgcctggaaaatttagatgggaaaatggatgagcaagtggaggtctccaaaattattagaaacgaggtgaatgatgtcaaagatgatctgtctcaaattggatttgatattgcagcaatccaacagatggttgctggattggaagggaagatcgagttgcttgataataaacaggatgcaactaatgctggtgtatggtacctctgccaaatagctggaggtctaaaagatggaataaatgccaagttttttcaggaagctaatgaaaaactcaagctcacagagttggctcagtctgaaagaaaggcagtgaaggggcttgaatctgttctggagagcagaaaggaacaaaaggcaatcgactccaaacaaaataccaccgcgataattgacgccgaaaagcccgtgaaaacggtcgatgggcctgtgaaaagcggcgcggtgcacaggtgtagcagaatctcatttcggaaggaaggcctcgctttgtga</cdnaseq>

Protein Sequence

<aaseq>MAMQTGFATSKVLILVGAGLTSSIVLRNGRLSDVLAELQELMKG VNQGEGSSAYDIALLQSQIRNLAQEVRDLTISRPITILSGNSDSGGSLSSYILPAAAV GAMGYCYMWWKGLSLSDVMFVTKRNMTKAVESMSKQLDQVSSALAATKRHLSQRLENL DGKMDEQVEVSKIIRNEVNDVKDDLSQIGFDIAAIQQMVAGLEGKIELLDNKQDATNA GVWYLCQIAGGLKDGINAKFFQEANEKLKLTELAQSERKAVKGLESVLESRKEQKAID SKQNTTAIIDAEKPVKTVDGPVKSGAVHRCSRISFRKEGLAL</aaseq>

Gene Sequence

<dnaseqindica>151..205#349..410#819..887#1033..1114#1595..1665#2269..2370#2460..2549#3189..3263#3359..3391#3466..3546#3683..3742#3835..4011#agctttccccttcccgaagcttcgccaatctcccctcctctctctctctctctctcctccccgcggtcgccgacgacctcgccaccgaccccgccgccggacgcgaggaagagacggggggagccccggaggcaggagcggcgggaggggatggcgatgcagacggggttcgccacctccaaggtcctcatcctcgtcggcgcaggtctcgtcaccgcaacctccccctcctcctcctcctcctcctcctcccgctctactatattttctagcatcgattcgagatgcggatcgccccgctgtgttctgatcctgatgcggtggtttttggccggcgtcgagctgcagggttgacgagctcgatcgtgctgcggaatggccggctatctgacgtgttggcggagcttcaggtcggtggattgcctgatgtttcttgagtagagtagttggattctgggcatctaattctgttgattgcttcgcgttatcgatcgtaagttgccaatacgctaatataggcgcgtcagtgttgcccgtgtgtgtttcaagcgatgttgtgatttatatatctgtttgtgggactccaatttatcaaatgcattacagctacatttcaccgatcaaacgttgggcgtgcacatgggcataactttttgtcgcttaatttcaatgtcgaatcatttcgatgcaccaattggaatgtcatgcctaagttaatcacccaatggctatgatgatgcgttcttcatctataatttgtagtaactcataaaatcgcagatgtttattgaagtagatggttttttccctgtttttaggagcttatgaaaggtgtaaaccaaggagaaggttcgagtgcctatgacatcgcccttcttcaatctcaggtatgcatcgtttcatatttttcatagaatcaacagttgaatggaagttacaatgcagacttcaatttcaataaagttgccagtttcagtaaaaaccactgcagtttgttgtttttattatttgtgtgctggcgcttgactgcagattcgaaatttagcacaagaagttagagatttgactatatcaaggcctattaccatattgagtggcaactccgactctggaggtttgttcttgtttgatcctctcctcgttctgttttcagtttcactcttctagcagtcatgcaaagagtctatccatataaagcttttgttacatctttttacttagattatttgtcaatcttaaggtttagatagacaattattggcttgtatcagctcctctacaaggctaccaccccttggtgaaaaagtggtcaatagtcatatttttgctaaaactcgttaaagagtgtcaatctctattctctaattcaatattgagtaattcatgaagctgaaatgcttcagcgattacagtatgaatcatgttgattggtcaataatagcaatgtaatgacaaatgggataggaatgctggtacattcagctgtttctcacaacattcatgaacatatctcactagctacttgtccccatgtgacatgtatctttttcttatccgtgttgtttattcactagcatttgcatcccttttgcaggcagtttatcctcctacatactgcctgcagctgcagttggagcaatgggttactgctatatgtggtggaaggtaaaatcaggaatatacaatgccactttgatctatcagcttttatattctgatttttcttccttgctttctttctccacaaacactccttactatccttttccttttattatacttacagccttcaataaattagtaactgaatgaagagagtaatatgatgttccccatttgcttgtttaccttgtttcttgtagttatatgtcttaagaactatgctacctaagtctccctgtaaagtatttccatgcagtcccagtggttctatgtggatccaagtatccaactttgatatataattggcatttggcacccttgtatgtattttgagacatcatgaataaaccacattcttttttttttgggcgggggattaaattgctttcttagtcatgtaataacacctctctgattctgtgaccaaatattctatcaagaatcacagtttcgggttgagagactcttttcatgatccctaggccctagtatttaagtaaaaccatcaaatctgtcttgtcctaatggtgtttgtagactaaattactagtacaatgatgaactgtatgtgttaaacttttcttacattatagtatcttcctgcagggattgtccttatcggatgtcatgtttgttaccaaacgcaacatgaccaaagctgttgagagtatgtcgaagcaattggatcaagtgtcttcagctttagctgtatgctttacatgctgaatcgttacatatttgaagtagttttccttcgcatatgctgactagtgttttctaaattcaattaatttcaggcaacaaaaaggcatctaagtcagcgcctggaaaatttagatgggaaaatggatgagcaagtggaggtctccaaaattattagaaacgaggtttgttgatttgtgatgctgctagcccttcaactttttacacatggaaatttttgaagttcctttttttttttctctggagcaataattattgtttcatttttttcattacatcaagtctaattagcatctgataactttattattaaattgtgtttctacctgaggtgcataactcttattagtttgatttgtgtagtcgcatctgaaaaggtggatcaggattttctttgtcatgccaatattgtttcaagctaaaaactgtgccctcgataaagccaggaagcacttgacatggctattataggatatgcattgaaatatggtggaattgttggcttttactataatcattgacagcatattccaagtgatcgatcttgcccataaaccataaaacaacatcatgaagccaagaatatatacaagcgcaagcataagcataatgatatttgtcatcaatgaatggtctttagttgcattaaaatataccttcttaaaaatagctactgtaaatctgcaagtactcatctatggaaagataaattttacagcatttttcattttcttctcgaaagcagaaaagttttgttcttcccaatgttatgcaaaagacatgattctgttctctatgcacaggtgaatgatgtcaaagatgatctgtctcaaattggatttgatattgcagcaatccaacagatggttgctggattggtgagttttattagtttataacccttgagcatgaacctgtgtcagaacacttctttggttatcctgacctttatgttctcctttgacattatcaggaagggaagatcgagttgcttgataataaacaggtggctaaacatacccatcaatatttaacgtgctgattttttccttttgcctaacctcttgtgtttaccgacaggatgcaactaatgctggtgtatggtacctctgccaaatagctggaggtctaaaagatggaataaatgccaagttttttcaggtgagtagatatcatttataaaggttcaggattgcatgcaaggtctaaggatgccttatcttggatagttcgcttttcttttggctcatactgctcattgtgctgtaatgatccttctatgctctccattccacaggaagctaatgaaaaactcaagctcacagagttggctcagtctgaaagaaaggcagtgaaggtaatacacaattaatatgcagatgtttgtcctccattcaggtaatttcggtttctttatgccaatccatatctgtgttgtgcacattttaggggcttgaatctgttctggagagcagaaaggaacaaaaggcaatcgactccaaacaaaataccaccgcgataattgacgccgaaaagcccgtgaaaacggtcgatgggcctgtgaaaagcggcgcggtgcacaggtgtagcagaatctcatttcggaaggaaggcctcgctttgtgatcaaagcaaagcgatcgtaaccagcccgctctcgcgatgtacattgtctgcctgattgttttgttcgattaaaaaaaatataaaataaaacctgtacctggagttattttgagtaggcaggttgatgcactattctgattcaaaagtgtatgtggttcaatccacgtacgctctttttcttggattttgattcatgtgatctcatttatttttatttggtgtgaatgtttgtacacagttggttcgaaacattccttgtgccattgtgagagttcccttcggcctgcatgcccttgtcccatatgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0482740, RefSeq:Os09g0482740