Os07g0686900

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Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0686900| Description = Similar to Alpha-L-arabinofuranosidase| Version = NM_001188412.1 GI:297725954 GeneID:9268769| Length = 4785 bp| Def...")
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Gene Name

Os07g0686900

Description

Similar to Alpha-L-arabinofuranosidase

Version

NM_001188412.1 GI:297725954 GeneID:9268769

Length

4785 bp

Definition

Oryza sativa Japonica Group Os07g0686900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29843830..29848614

Sequence Coding Region

29843855..29844031,29844386..29844440,29844574..29844785,29844938..29845059,29845143..29845296
,29845374..29845406

Expression

GEO Profiles:Os07g0686900

Genome Context

<gbrowseImage1> name=NC_008400:29843830..29848614 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29843830..29848614 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtgcagagaacagatgctgcctcttggctccgtgagctggttcttgtttacgccatgtgctggacagtctcactgggttttgttgcgggtcaaaccgggcagttgaatgtcgatgcctcgccgcagaatgcaaggaagatccctgataagatgttcggtatatttttcgaggagatcaaccatgctggggctggtgggttgtgggcagagcttgtaagtaacagaggttttgaggctggtggacctaatacaccttcaaacattgacccatggctgataattgggaacgaatcaagtatcattgttgggactgataggacatcctgttttgagaaaaatccggtggcacttcggatggaagttctttgtgattctaaaggaaccaataactgcccttctggaggtgtaggagtctacaatcctggttattggggcatgaatattgaaagaagaagggtttataaggtgggcctgcacattagatcttcagatgcagtatccttaactgtttccttgacaagctccgatggtctgcagaaactggcctctcacaccataacggctagcaagaaacagtttgctaaatggacaaagatagagtttcatctgaaatctagccaaaccaatactaattcaaggctccagcttacaaccagcaaaagtggggtgatttggctcgaccaggtgtcagttatgccatcggatacctacatgttttgcagactattcatcagtaaacgccagtag</cdnaseq>

Protein Sequence

<aaseq>MAVQRTDAASWLRELVLVYAMCWTVSLGFVAGQTGQLNVDASPQ NARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLIIGNESSI IVGTDRTSCFEKNPVALRMEVLCDSKGTNNCPSGGVGVYNPGYWGMNIERRRVYKVGL HIRSSDAVSLTVSLTSSDGLQKLASHTITASKKQFAKWTKIEFHLKSSQTNTNSRLQL TTSKSGVIWLDQVSVMPSDTYMFCRLFISKRQ</aaseq>

Gene Sequence

<dnaseqindica>26..202#557..611#745..956#1109..1230#1314..1467#1545..1577#gtgagctgcgagctcattgagcacaatggcagtgcagagaacagatgctgcctcttggctccgtgagctggttcttgtttacgccatgtgctggacagtctcactgggttttgttgcgggtcaaaccgggcagttgaatgtcgatgcctcgccgcagaatgcaaggaagatccctgataagatgttcggtatatttttcgaggtgagactgaatctggatattggtatctgtttagaacaacatttgttttctcactcaaaaagaaaatagaacaagcatttttgttctaaccggtatacgaactaaaagggacaattacttgtataaacttggtgccagcacaaacatttttcctagttgtagaccatattgttcagatagcatttctagttatttactgaatctcatacaattaaagtatgcactgtttggaacacagttattttctcctgatttgcaacattttcctatatatagtacctgcatatcaaatgaggttgcttcgacttctattccatgctgggagcttgaatatatttgtggttctacttgtaggagatcaaccatgctggggctggtgggttgtgggcagagcttgtaagtaacagaggtaaggcaaagcatatctgtgttaatcaagatgatagaagttatagaggagcttgtaagatgataggaggaacagcggtggttgggatatcgtacttttgcttaatgtttgtagtgctcaaatttatttccaggttttgaggctggtggacctaatacaccttcaaacattgacccatggctgataattgggaacgaatcaagtatcattgttgggactgataggacatcctgttttgagaaaaatccggtggcacttcggatggaagttctttgtgattctaaaggaaccaataactgcccttctggaggtgtaggagtctacaatcctggttattggggcatggtatgatgtgtttcttatttatttatctgtccgtctacaattttttttgaagtttccgtaatcttatttgacagtttaaatttgatctggcgtgtatttaactgattaaacatcatggaatacactatatagtatttcttcacattttccagaatattgaaagaagaagggtttataaggtgggcctgcacattagatcttcagatgcagtatccttaactgtttccttgacaagctccgatggtctgcagaaactggcctctcacaccataacgtaatatttatgtttccattaatatcgctgggatgctgcatttttttccctaataattgcttgaatttccatgttgcttccagggctagcaagaaacagtttgctaaatggacaaagatagagtttcatctgaaatctagccaaaccaatactaattcaaggctccagcttacaaccagcaaaagtggggtgatttggctcgaccaggtgtcagttatgccatcggatacctacatggtatactttattcatgtctcattttatttcttttggtgtaccattatctttacttatttcgtgcttcagctgcacagttttgcagactattcatcagtaaacgccagtagacaactatgatttttttaagagcaaacccatcactatactggatggcccatatcctataagggaaattccttttttgccgggtctataagggaaattcctactgagttgccatcagatttacaggtgttttatacttatcagttcccaccttttattcattgttatgttttcattttagggacacggttttaggaaagatctcgcttctatgttggccaatttaaaacctcaatttcttaagtttccaggtttgccaactttacatcatatattttttttctgaagttaggtatatcaatattatcatatagttttgataatatgtatcaaacttaggtggtaactatgccatgggaaattatctgcgaaatgcatttcgatggagtgaaactgtgggtccatgggaggaaagacccggtcacttcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcaggtaattggaacgtagtccatgacttcaaaactaatatttattaaaatatacttcataagttcatattgatattcatatactgcagctagctgaagacctcggtgcttcgccagtatgggtggtcaatgatggtagttcaaatctccatggattattaggtacaactaacactctgtttcatgttgtgtcaataaactattttcaacattgcaggagcaagccaaaatgaagaggtatctactgcaacaattgcatcattagtgaaggtttgttcttccaaaatattcaatcctttgataaaacgatcaatctagtacatcaataccttgttccccatttccttcgttcttgtaatgttcaggacgtggttgatggcatcgagtttgccaggggagggcccaagactacatggggttcagttcgtgcagcgatgggtcatccacaaccctttaaccttgactatgtttcaatagggaatcaagaatgctggatgctctattacagaggtctgtagctcttcagttgcacgtccttcctaacttcataccaagaattgatgtttgaacttaatgcatcatattcctgtacttcatgttggaaatttttgttaatcgaataatgtcatgtttgtgcttgcagatgatagaccaagagtttccttttccttcttatacatcaatttttaatagcgttttagtcctctataagataatttgtaaaataatttcatctacctttatatcttgtgggtaagcagggagagctcatattatatgatctttcaattaacaggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcgtgtcaagttgtgataaatccactatttctccgtccaaccctgccgatctatatgatgttcatgtaatgtctattcattatgttcctttccttgtttgttttcacaatttcgtgttttttccaaattatggtttcgtttatggctgacaaaaacatcatctataccacaggtttatacctcatctagtgatatgttttccagaactagtatgtttgacaatacgacgcgcagtggaccgaaggtatgctcaaatgttatccctacatctgatatacatagatacttccactttccatgctcagaaattgacttggggagctctatgactctttaggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaaggaacactggtagaagcactagcagaggcagcatttctcgttggattagaaagaaacaggttaataatcatactttttttagaggaatatttatacttttattttctctccatcatggatttctgctgtgtaagctctgccataaattggtccatgataccaaagatttgaaactgcttgaagattaaagctttgggcatcaaagggcagtgtgaacgaacatgcttccccttcaggctaccatgtctgggctttctgcatcactggttgattgcattgcaaagataaacattccgtaccttgttttcctgcagcgacgtggtagagatggcaagctgtgcaccgctctttgtaaatgacaatgatcgcaggtaaggatccaacaactcaggaattcttatttttcagattgctttctttgtgtcatatctgactgagttcacaaccctcaaaaataaaatgaaatgatgcataccatagatggagtccagacgcaattgtgttcaactcatggcagaactatggatgcccaaactactggatgctacatttcttcaaagattcatgcggcgcaacgttccacccatcaaacattcagatttccagctacaaccagctggttgcatctgccatcacttggcagaatagcaaagacaagagcacttacctgaaaataaaggtgcgaactttgttaagctgctctttgtttcagagagagtgagctatgcattggtttagcttggaaatgaccaagtgagcacaaagcgaaactttttttttttttgcagctagtgaactttggcaaccaagctgtgaatctcagcatatctgtgtctgggctggatgagggcatcaagagctcagggtcgaagaagaccgtgcttacttccagcgggccgcttgatgagaactcattccagcagccacaaaaggttagtacactacacactgactgacagctgatcatgtatcctatcctgtaaattaaacaaaacagatggtagtaactatattgaatgtgtacgaaattgttgtaggtggcgccagtgtcgagcccggtggacaacgcgaatgagcagatgggcgtgttggtggatccatactccctcacgtcgttcgacctgctgctgcaaccgagcaagcactcgaccatatgaaaggagatatatactgtagtagtaatagtcttaagaatatttattagcctgcaaaaagaggggaaaagagaataaaggaatgttgatggggggcttgattgctcaggctaactgcattgcatggaacataatatgcccatcaatattcttattcgattcagcccaagaatagagagatttaccaggtgagggtgagtcatccgactcaagaattgttgtttcaatgaaattcagattagctgacgttgcaccgcatctgggatcttggctggcacacagcatatgtaagtatgtacatacgtgcataccatcaccacctgctagtgctaggaagcttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0686900, RefSeq:Os07g0686900