BGIOSGA021840

From RiceWiki
Revision as of 16:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021840

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021840, complete gene.

LocusTag

OSJNBA0015I14.18

Ensembl Transcript ID

BGIOSGA021840-TA

Ensembl Protein ID

BGIOSGA021840-PA

Length

2457

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3883099..3885555

Sequence Coding Region

3883099..3885555

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3883099..3885555 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3883099..3885555 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGGCGTCTACATTTTCACCACAATATTCTTCCTTCTCATGCCAACAATTGCTCTTGCAAATCATAGAAAACCCTTCCTTGCTAGACGTTCATCCATTTCAACCCAAGCCTTCATTGCTAGACGTTCATCCATTTCAACCCAGGATGACACCACCACCATCCTAGTGTCCCCCAATGGCGACTTCTCCTGCGGATTCTACAGGGTGGCCACCAACGCATTCACCTTCTCCATCTGGTTCTCCAGGTCGTCGGAGAAGACGGTCGCTTGGACGGCGAACCGCGATGCTCCGGTGAACGGAAAGGGTTCCAGGCTCACCTTCCAGAAGGACGGCACCTTGGCCCTTCTTGACTACAATGGCAAAGTTGTATGGAGCACCAACACAACAGCCACTCGAGCCGACCGAGCAGAGCTTCTCAACAATGGAAACCTTGTTGTCATGGATCCTGAAGGCCAGCATCTATGGAGGAGCTTCGACTCGCCAACAGATACACTTCTGCCGTTGCAGCCAATAACTAGGAATGTAAAGCTGGTATATGCATCTGCCAGGGGGCTGCTATATTCAGGCTTCTACAACTTTCTCTTCGACAGTAACAATATTTTGACTCTCGTCTACAACGGCCCAGACACTGCCAGCATATATTGGCCAAATCCTTCCTTTGACCAGCCATGGAAGAATGGAAGGACAACTTATGACAGTCTTCGATATGGTGTTCTAAATCAGACAGGTTATTTTGTATCAAGTGACCTTTTTAAGTTTGAAGCCTCTGATCTTGGCGATCATGTCATGAGGAGGTTGACACTGGATTACGATGGAAATCTTAGGCTGTACAGCCTAAACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGAGTATGTCAAATGCATGGAGTGTGTGGCACAAACGCTGTCTGCAATTACATCCCGGAACTCCATTGTTCTTGCCTCCAAGGCTTCGAGGTGATTGATCCGACTGACTGGAGCAAAGGATGCAAGCGCAAGGTGGACATAACAGCAATCTGGGATAAAGGGAATAGACATAATATTACAAACAACTCTACCAGCCAGGACTTCTCAATCAGAAAGATCACTGCAACTGACTTCTGGGGGTATGACACCGCCTACACACAGTTAATACCATACTCAAACTGTAGAAATATGTGCCTCACCGCCAATAACTGTCAAGCCTTCGGCTACCGGAAGGGAACTGGTGAATCTTATCCAAAGTACTCTCTTTTCAATGGCTGGCGCTTCCCAGATCCTTACAATGACCTCTATCTGAAAGTTCCCAAGGGGGTGCCGTTTCGCGAAGAATCAGATTCTAGACCAACCCATTCTTGTGGAGTTACAGAAAAGTTAGCCTACCCTTCATCACAAATGTTTGAGGAAGTCACTTCCAATTTCGAGTTTGGTTACTTCCTTTCTTCTGTGTTAACGTTGCTTTTGATTGAAGTGGTTTTAATCATTGTTGGGTTTTCAGTTGTTAGAAAATGGGAGACAAGGCCTGAGATTACCGATGAAGGTTACGCAATCATTTCTAGTCAGTTCCGAAGATTCAGCTACAAGGAGTTACAAAAGGCAACCAATTGTTTTCAGGAAGAGCTGGGAAGTGGTGGATCGGGTGTGGTTTACAAGGGAGTCCTCGATGATGAAAGGAAGGTTGCAGTGAAAATTTTAAATGATGTGATCTATGGAGAGCAGGAGTTAAGGTCTGAGCTAAGTGTCATAGGAAGAATATATCATATGAATCTGGTTAGAATTTGGGGGTTTTGTGTGGAGAAGACAAAGAGGCTCTTGGTTTCTGAGTACAGTGAGAACGGTTCTTTAGACAGACTTCTGTTTGACTACCACAACTTATTTCCTGTCCTAAAATGGAGCCAAAGGTACAATATTGCACTTGGAGTGGCAAAAGGACTGGCATATCTTCACCATGAGTGTCTTGAATGGATCGTGCACTGCGATATCAAACCGGAAAACATATTGTTAGATAAAGACTTTGAGCCAAAGATTGCAGATTTTGGACTGGTGAAACTACTTAAGCCAGAAGCAGCACAAATGCCGTCAAGAGTGCATGGAACTAGAGGGTATATTGCACCAGAATGGGCTCTAAATCTTCCAATCACTGGCAAGGCTGATGTTTACAGCTATGGAGTAGTACTTCTTGAGTTAGTGAAGGGGAGTCGGGTTTCCAGATGGGTGGTTGATGGCAAGGAGGAGGTAGGTCTGGCTGTTAAACGCAATGTTGACACTCTTAGAGAGAAACTAGCTAGCGAAGATCAATCATGGCTGCTGGAATTTGTTGACAGCAGGCTGGATGGAGAATTCAACTATTCACAGGCGGCCACAGTACTAAAGATAGCAGTGTTATGTCTGGAAGAAGATAGGCGCATGAGACCAAGCATGGATACTGTGGTTGAAGTCCTGCTTTCGCTTGTGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MRGVYIFTTIFFLLMPTIALANHRKPFLARRSSISTQAFIARRSSISTQDDTTTILVSPNGDFSCGFYRVATNAFTFSIWFSRSSEKTVAWTANRDAPVNGKGSRLTFQKDGTLALLDYNGKVVWSTNTTATRADRAELLNNGNLVVMDPEGQHLWRSFDSPTDTLLPLQPITRNVKLVYASARGLLYSGFYNFLFDSNNILTLVYNGPDTASIYWPNPSFDQPWKNGRTTYDSLRYGVLNQTGYFVSSDLFKFEASDLGDHVMRRLTLDYDGNLRLYSLNETSGNWSVSWMAFSRVCQMHGVCGTNAVCNYIPELHCSCLQGFEVIDPTDWSKGCKRKVDITAIWDKGNRHNITNNSTSQDFSIRKITATDFWGYDTAYTQLIPYSNCRNMCLTANNCQAFGYRKGTGESYPKYSLFNGWRFPDPYNDLYLKVPKGVPFREESDSRPTHSCGVTEKLAYPSSQMFEEVTSNFEFGYFLSSVLTLLLIEVVLIIVGFSVVRKWETRPEITDEGYAIISSQFRRFSYKELQKATNCFQEELGSGGSGVVYKGVLDDERKVAVKILNDVIYGEQELRSELSVIGRIYHMNLVRIWGFCVEKTKRLLVSEYSENGSLDRLLFDYHNLFPVLKWSQRYNIALGVAKGLAYLHHECLEWIVHCDIKPENILLDKDFEPKIADFGLVKLLKPEAAQMPSRVHGTRGYIAPEWALNLPITGKADVYSYGVVLLELVKGSRVSRWVVDGKEEVGLAVKRNVDTLREKLASEDQSWLLEFVDSRLDGEFNYSQAATVLKIAVLCLEEDRRMRPSMDTVVEVLLSLVE</aaseq>

Gene Sequence

<dnaseqindica>1..2457#ATGAGAGGCGTCTACATTTTCACCACAATATTCTTCCTTCTCATGCCAACAATTGCTCTTGCAAATCATAGAAAACCCTTCCTTGCTAGACGTTCATCCATTTCAACCCAAGCCTTCATTGCTAGACGTTCATCCATTTCAACCCAGGATGACACCACCACCATCCTAGTGTCCCCCAATGGCGACTTCTCCTGCGGATTCTACAGGGTGGCCACCAACGCATTCACCTTCTCCATCTGGTTCTCCAGGTCGTCGGAGAAGACGGTCGCTTGGACGGCGAACCGCGATGCTCCGGTGAACGGAAAGGGTTCCAGGCTCACCTTCCAGAAGGACGGCACCTTGGCCCTTCTTGACTACAATGGCAAAGTTGTATGGAGCACCAACACAACAGCCACTCGAGCCGACCGAGCAGAGCTTCTCAACAATGGAAACCTTGTTGTCATGGATCCTGAAGGCCAGCATCTATGGAGGAGCTTCGACTCGCCAACAGATACACTTCTGCCGTTGCAGCCAATAACTAGGAATGTAAAGCTGGTATATGCATCTGCCAGGGGGCTGCTATATTCAGGCTTCTACAACTTTCTCTTCGACAGTAACAATATTTTGACTCTCGTCTACAACGGCCCAGACACTGCCAGCATATATTGGCCAAATCCTTCCTTTGACCAGCCATGGAAGAATGGAAGGACAACTTATGACAGTCTTCGATATGGTGTTCTAAATCAGACAGGTTATTTTGTATCAAGTGACCTTTTTAAGTTTGAAGCCTCTGATCTTGGCGATCATGTCATGAGGAGGTTGACACTGGATTACGATGGAAATCTTAGGCTGTACAGCCTAAACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGAGTATGTCAAATGCATGGAGTGTGTGGCACAAACGCTGTCTGCAATTACATCCCGGAACTCCATTGTTCTTGCCTCCAAGGCTTCGAGGTGATTGATCCGACTGACTGGAGCAAAGGATGCAAGCGCAAGGTGGACATAACAGCAATCTGGGATAAAGGGAATAGACATAATATTACAAACAACTCTACCAGCCAGGACTTCTCAATCAGAAAGATCACTGCAACTGACTTCTGGGGGTATGACACCGCCTACACACAGTTAATACCATACTCAAACTGTAGAAATATGTGCCTCACCGCCAATAACTGTCAAGCCTTCGGCTACCGGAAGGGAACTGGTGAATCTTATCCAAAGTACTCTCTTTTCAATGGCTGGCGCTTCCCAGATCCTTACAATGACCTCTATCTGAAAGTTCCCAAGGGGGTGCCGTTTCGCGAAGAATCAGATTCTAGACCAACCCATTCTTGTGGAGTTACAGAAAAGTTAGCCTACCCTTCATCACAAATGTTTGAGGAAGTCACTTCCAATTTCGAGTTTGGTTACTTCCTTTCTTCTGTGTTAACGTTGCTTTTGATTGAAGTGGTTTTAATCATTGTTGGGTTTTCAGTTGTTAGAAAATGGGAGACAAGGCCTGAGATTACCGATGAAGGTTACGCAATCATTTCTAGTCAGTTCCGAAGATTCAGCTACAAGGAGTTACAAAAGGCAACCAATTGTTTTCAGGAAGAGCTGGGAAGTGGTGGATCGGGTGTGGTTTACAAGGGAGTCCTCGATGATGAAAGGAAGGTTGCAGTGAAAATTTTAAATGATGTGATCTATGGAGAGCAGGAGTTAAGGTCTGAGCTAAGTGTCATAGGAAGAATATATCATATGAATCTGGTTAGAATTTGGGGGTTTTGTGTGGAGAAGACAAAGAGGCTCTTGGTTTCTGAGTACAGTGAGAACGGTTCTTTAGACAGACTTCTGTTTGACTACCACAACTTATTTCCTGTCCTAAAATGGAGCCAAAGGTACAATATTGCACTTGGAGTGGCAAAAGGACTGGCATATCTTCACCATGAGTGTCTTGAATGGATCGTGCACTGCGATATCAAACCGGAAAACATATTGTTAGATAAAGACTTTGAGCCAAAGATTGCAGATTTTGGACTGGTGAAACTACTTAAGCCAGAAGCAGCACAAATGCCGTCAAGAGTGCATGGAACTAGAGGGTATATTGCACCAGAATGGGCTCTAAATCTTCCAATCACTGGCAAGGCTGATGTTTACAGCTATGGAGTAGTACTTCTTGAGTTAGTGAAGGGGAGTCGGGTTTCCAGATGGGTGGTTGATGGCAAGGAGGAGGTAGGTCTGGCTGTTAAACGCAATGTTGACACTCTTAGAGAGAAACTAGCTAGCGAAGATCAATCATGGCTGCTGGAATTTGTTGACAGCAGGCTGGATGGAGAATTCAACTATTCACAGGCGGCCACAGTACTAAAGATAGCAGTGTTATGTCTGGAAGAAGATAGGCGCATGAGACCAAGCATGGATACTGTGGTTGAAGTCCTGCTTTCGCTTGTGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021840