Os07g0689400

From RiceWiki
Revision as of 08:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0689400| Description = TolB, C-terminal domain containing protein| Version = NM_001067241.1 GI:115474214 GeneID:4344360| Length = 5733 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0689400

Description

TolB, C-terminal domain containing protein

Version

NM_001067241.1 GI:115474214 GeneID:4344360

Length

5733 bp

Definition

Oryza sativa Japonica Group Os07g0689400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29963800..29969532

Sequence Coding Region

29963876..29964086,29964349..29964550,29964635..29964745,29964849..29964897,29964984..29965090
,29965176..29965679,29966223..29966351,29966602..29966898,29967011..29967469
,29967565..29967634

Expression

GEO Profiles:Os07g0689400

Genome Context

<gbrowseImage1> name=NC_008400:29963800..29969532 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29963800..29969532 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctacctctgcttcagcagcacatgggaatcacccatgccaactccatcaccaccgagccttctccttctccccgcccgccgcttcttcgcctcttgccccagcctcgccgccggcgtcatgctcatgccaaacacatcgccctcttgaccaactgcaagtgcgcctccgccgcttccgcttccgtggaggaagacgacgtagcaggtgggttgggatatcgtcatcctccaaagcaaatacaagaaatccttgatgttccacccaatcccagttaccttatttcccctcgcagagatcggatcatgttcctacagcgcacagccatgcctccattatctgagcttacgaaaccagaaattgtactttccggcatacgcattgatcctgggtctaacatgaggagcagaatgtcgttttataccggcattattatccatgacctgatggatagtggaactttgggtccagcaaaagaggtccatggatatgctgatggtgcaaagattaattttgtgacatggtcacctgatggtcagcacatggcatttactgtgcgctacgaagataaggtggacaacagcgtcaacttgtcactatgggttgccaatgcagaatctggagaggctcggccactctgcatatcagaagacataagattgaatgctatttttgagctatttgtatgggtgaatgattctaccgtattggtctgcactattccttcgtcacgtggttgtccaccaaagaagccattggttccttttggtcctaggatccgctctaatgagcataaaaatgtagttcagatgagagccacaaaagaaatgttgaaagatttgcatgaagaagaattgtttgattactatgcaacatcacagttaatactgctctcactggatgggacagtgaagccaattgccccacctgcgatatatactgctcttgatccttcaccagatgagaagtatctgatgctcacttctgtccaccggccatattcttctactgtctcgtataaaaggttcccaaagaaggttgagctgtggacagttgatggtacatttatccgtgaagtttgtgatctgcccctagctgaagatattccaatcacatctggtagtgtccgtaaggggaagcgtttaatcagttggaggcctgacatgccttcaacattgtattgggtggaggcacaagatggaggagatgcaaatgttgaagtctcaccacgcgatatagtatatatggagcttgcagatcctttaaatggcgagaaacctcaagtcttgcttaaacttgaccttcggtatagaaggatctcttggtgcaatggatcacaggcactggtttatgagcattggtacaggacacgcagaacaagaacatgggttatctctcctgactgcaaagatgttagcccacgggtattatttgaaagatcttcagaagatgcctattcaaatcctggttctccaatgatgtgcagaacccctgcaggcacctttgtcattgcaaaaattaagacaaactatgaaggaacctacatcttgttgaagggaaaaggtgccacaccaaaaggaagcatcccttttcttgatcttttgaatataaatacgggagtgaaagagcggatatgggagagtagcaaggaaaagtattatgaatctgttcttgctctgatgtcctataatccaaagtgtgaaatccagcttaatcatttaaagttgcttgtatcaaaagagtcaagaatggaacctacccagtattatatcaaggcttggccagataaaactcaagtgcagatcacaaattattcccatccatatccgcaactggcattgctgcagaaagaagtaatcagataccagcgagtggacggtgttaaactcactgctacattatatctgcctccaggctatgatccatcaaaagatgagcctcttccatgcctaatttggtcgtatcctggagaatttaaaagcagagaggctgctggccaagtccgtcgctcacccaataaatttgcacgcatcaggagcaactttcctcttctttggttagctagagggtttgctattctggccgacccaacaatccctataattggtgaaagagaccaagaggctaatgataggtag</cdnaseq>

Protein Sequence

<aaseq>MLPLLQQHMGITHANSITTEPSPSPRPPLLRLLPQPRRRRHAHA KHIALLTNCKCASAASASVEEDDVAGGLGYRHPPKQIQEILDVPPNPSYLISPRRDRI MFLQRTAMPPLSELTKPEIVLSGIRIDPGSNMRSRMSFYTGIIIHDLMDSGTLGPAKE VHGYADGAKINFVTWSPDGQHMAFTVRYEDKVDNSVNLSLWVANAESGEARPLCISED IRLNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIRSNEHKNVVQMRATKE MLKDLHEEELFDYYATSQLILLSLDGTVKPIAPPAIYTALDPSPDEKYLMLTSVHRPY SSTVSYKRFPKKVELWTVDGTFIREVCDLPLAEDIPITSGSVRKGKRLISWRPDMPST LYWVEAQDGGDANVEVSPRDIVYMELADPLNGEKPQVLLKLDLRYRRISWCNGSQALV YEHWYRTRRTRTWVISPDCKDVSPRVLFERSSEDAYSNPGSPMMCRTPAGTFVIAKIK TNYEGTYILLKGKGATPKGSIPFLDLLNINTGVKERIWESSKEKYYESVLALMSYNPK CEIQLNHLKLLVSKESRMEPTQYYIKAWPDKTQVQITNYSHPYPQLALLQKEVIRYQR VDGVKLTATLYLPPGYDPSKDEPLPCLIWSYPGEFKSREAAGQVRRSPNKFARIRSNF PLLWLARGFAILADPTIPIIGERDQEANDR</aaseq>

Gene Sequence

<dnaseqindica>77..287#550..751#836..946#1050..1098#1185..1291#1377..1880#2424..2552#2803..3099#3212..3670#3766..3835#actcagttcatccacagcaaagcgcacaggcatagcagcctccttcccctcttcttcttcttcagtagtggagtacatgctacctctgcttcagcagcacatgggaatcacccatgccaactccatcaccaccgagccttctccttctccccgcccgccgcttcttcgcctcttgccccagcctcgccgccggcgtcatgctcatgccaaacacatcgccctcttgaccaactgcaagtgcgcctccgccgcttccgcttccgtggaggaagacgacgtagcaggtggtaggtgcctcttttggccggggaaacatcttttggtttaggattcttctctctagagattggagattaattaatcaataataagttaattcattcaccagtcgtagtcccctgacctaaccccttcatatttgggagataatactcgtattcaatcccaccattttttctgcctgaattggggaacgactgtgttttgctttgttactttactatatattactacaagccttaaatttgtactcgatgcatcaatctgcagggttgggatatcgtcatcctccaaagcaaatacaagaaatccttgatgttccacccaatcccagttaccttatttcccctcgcagagatcggatcatgttcctacagcgcacagccatgcctccattatctgagcttacgaaaccagaaattgtactttccggcatacgcattgatcctgggtctaacatgaggagcagaatgtaagtaacacaccattaccattcaatcatagcaggagggttgacacctcatattcttgtgttcaatgatttacttatttgtaggtcgttttataccggcattattatccatgacctgatggatagtggaactttgggtccagcaaaagaggtccatggatatgctgatggtgcaaagattaattttgtgacatggttatttcccaaacatgtttaaatttaacttttaatgtgcaaccaaatcatatcacactgttttctattcatatttcctctttcggcaattttggaatttcaggtcacctgatggtcagcacatggcatttactgtgcgctacgaagataaggtgattggctgatgctttggactatgaaattggacaacatctttagtggttatcgatccttttgtttcactgttgtattttagtaggtggacaacagcgtcaacttgtcactatgggttgccaatgcagaatctggagaggctcggccactctgcatatcagaagacataagattgaatgctatttttgagctgtgagtgtctgcatctttccgatggagcatctttctactcctttccttcctaagtcatcagattttatcatgtttttctttacagatttgtatgggtgaatgattctaccgtattggtctgcactattccttcgtcacgtggttgtccaccaaagaagccattggttccttttggtcctaggatccgctctaatgagcataaaaatgtagttcagatgagagccacaaaagaaatgttgaaagatttgcatgaagaagaattgtttgattactatgcaacatcacagttaatactgctctcactggatgggacagtgaagccaattgccccacctgcgatatatactgctcttgatccttcaccagatgagaagtatctgatgctcacttctgtccaccggccatattcttctactgtctcgtataaaaggttcccaaagaaggttgagctgtggacagttgatggtacatttatccgtgaagtttgtgatctgcccctagctgaagatattccaatcacatctggtagtgtccgtaaggggaagcgtttaatcagttggaggcctgacatgccttcaacattgtattggtgagtaacaattccttagaagcttctgttgaaaaaaatatattgttgttctaataataatagtaatatttttccaatcctgatgatagtaggtaagctcaaaattgtagaatttataatgccaatgcactgcttctgctttgatgagatttgcaaaggtgaccgtgttattgtcttctcttgataggtagtgcagctagttgcttgcgtacgaaacaactagttgacagataatgaccctaggcatgctattagttattcttttgactgactttttaccatgtaatcacaatccattttaacttgactatcaacttttctgaaagatcaacttaatgcaagatttggtgacatagtatgtcaaaggtaacctcaaattagttagaaaaggtgaatggagatctgtcagaactcagaaacaatcatcatactaacagtagtccctacttagttcgtaataccacatgtccaatcaccatgctaacaatagttctcagatctgactgcgacccagttctattttcgtatgtgatgttttgaaagggtggaggcacaagatggaggagatgcaaatgttgaagtctcaccacgcgatatagtatatatggagcttgcagatcctttaaatggcgagaaacctcaagtcttgcttaaacttgaccttcggtataggtattaaattactactggcctaacattttctcctcatggtgttacagagtgaatatgcttttacagaaaggcaaattatgatgagtacatttggtttagcttggagataaatttggatttcgacttcaaagatgtaatcaatgatttttcaggctaataatctgtgtttttgcatttaaaatacacaaatatactttgtccaactgcttgccaaatcactcaaaatttactattttgatgaaacctgcagaaggatctcttggtgcaatggatcacaggcactggtttatgagcattggtacaggacacgcagaacaagaacatgggttatctctcctgactgcaaagatgttagcccacgggtattatttgaaagatcttcagaagatgcctattcaaatcctggttctccaatgatgtgcagaacccctgcaggcacctttgtcattgcaaaaattaagacaaactatgaaggaacctacatcttgttgaagggaaaaggtgccacaccaaaaggaagcatcccttttcttgatcttttgaatatgtatgcttacaactatctctaccaaacatttctgttgcacctcccatgcctgctctgttatgactctttgaatccatgaacataatgtaggcataactttttttctttacagaaatacgggagtgaaagagcggatatgggagagtagcaaggaaaagtattatgaatctgttcttgctctgatgtcctataatccaaagtgtgaaatccagcttaatcatttaaagttgcttgtatcaaaagagtcaagaatggaacctacccagtattatatcaaggcttggccagataaaactcaagtgcagatcacaaattattcccatccatatccgcaactggcattgctgcagaaagaagtaatcagataccagcgagtggacggtgttaaactcactgctacattatatctgcctccaggctatgatccatcaaaagatgagcctcttccatgcctaatttggtcgtatcctggagaatttaaaagcagagaggctgctggccaagtccgtcgctcacccaataaatttgcacgcatcaggagcaactttcctcttctttggttagctagagggtaccatgcgccttatttttgtttcaccgacacatcacttttgcaacatttaccatttcatgaactagcaattctacctatgctgcatcttacaggtttgctattctggccgacccaacaatccctataattggtgaaagagaccaagaggctaatgataggtagttatactattcatctaaacatgattatgccaccctgtactttgaacttctggccttgctagtatgcaaagtacacaattttcatgctctccaatgtccgtcctgtactctccctattgaaacataattctgttattaccttaaaaagcatgatataattagaaatggtgctatttcttccttctcagatgagtaatttactatttccctaggtacatagagcagctagttgctagtgcagaagcagcggtaaatgaaattgtaagaagaggggtaagactttctcttgtatttgtttcctgtcaaatagtttatgtctttctgtctggcattgctttctatgtttcctctactggggttgatgttcttttttcagtaatcagtaactaatcatatagaatttgccctgttctttaggttgctcaccctgacaaaatagctgtgggtggtcattcatatggtgcatttatgactgctaatctcttagctcacgcgcctcatcttttctgctgtggaattgcccgttctggagcgtacaacaggacactgactccatttggttttcaggttcactttactgtataatagatatccttctttgcttaatgcacttatgacttatgtttcctgtatgtgttttatctgttttggtttgaagaaagaggtacggacactctgggaggctaccgatacctatattaagatgagtccctttatgtcagctaacaaaatcaagaaaccaattctactcattcatggagaagatgacagcaaagtaacaacagcaatgcaggtagcaacagtaccttcagagatagatgagttctaaatattttgtttattctacagctgtaggtactatctaaaactatttttttttatatatgcttgtagtcaagtcaattttatgatgctttaaaaggtaatggtgtgccatgtcgtcttgtgattctcccatttgagaggcaccactatgttgcaagggagagcgttatgcatgtaatttgggaaactgataggtggctggagatgtattgtgtgagtaactctaggaacatccaagttatggaatccactgttgatacaacatggtcacttgcttgtgaagctctagccttgtacttcaccaaaatatatagtctggtaaggttttctgtgttttgacttttgagttatgagattagcctcctcgagagcacaccagttagttctgtgcaatactgcaactttttttagtttgaattattagttcgcttcgtttcgatgttgtttactttgaatctagaacatgtgtgagtgtgacaggagagttttctttttatttatctattttttatttggctgtagacttgtagtactcgtgtgacagaggattgcaatgctttgtgaagtgcatgttgtctattgcaacaggcacctatttatttttggctatatgggacaattagtgtgttctaccgactgctttactactagtaaatttttggtgtgccattcagttactcatgagttccatgttatgttcttttgcagagcaagctggttcacttggcctttgctcaaattttccatcaggaagttaaaaaataatgtacagtgatatcaatgggctaccattatcatctgcctcgtggtaaaatatcttatttggagcatctctactgaactaacctttatctacaaaaagtattataccatcaagatatgctacatagaatagaaattatgtatttcaactactgcaccgtgctgctttatgtttatatgatttcacttagtgtgtaaaacttgtaataaacaattatggctttatgcatctcgggaggcaattgttggaatattattattccattattattccgttataattaaactgaatatattgaatgcaagatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0689400, RefSeq:Os07g0689400