Os07g0692900

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Revision as of 08:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0692900| Description = Similar to Ubiquitin-activating enzyme E1 3| Version = NM_001067260.1 GI:115474252 GeneID:4344380| Length = 4842 bp|...")
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Gene Name

Os07g0692900

Description

Similar to Ubiquitin-activating enzyme E1 3

Version

NM_001067260.1 GI:115474252 GeneID:4344380

Length

4842 bp

Definition

Oryza sativa Japonica Group Os07g0692900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:30138917..30143758

Sequence Coding Region

30139262..30139487,30139755..30139972,30140074..30140868,30140943..30141811,30142054..30142486
,30143000..30143596

Expression

GEO Profiles:Os07g0692900

Genome Context

<gbrowseImage1> name=NC_008400:30138917..30143758 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:30138917..30143758 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcccaccaacaagagagccgccggcacggacgacgaccgccccaccgaccccaagagacccaaggtcgcccaaaacgggagcacgaatggagtggtggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcagagattgccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaacgttgagatgtgggatttgtctgccaatttctttttatctgaaaatgatattggcaaaaacagggctgctgcttgtgtatccaagctgcaagagctcaacaatgctgttcttgtctctgctctaacagaggaactgaccacagaccacctgtctaaattccaggctgttgttttcaccgatataggtttagacaaggcctacgaatttgatgactactgtcacagccactgccctcctatttccttcatcaaagctgaagtttgtggtctctttggtactgtcttttgtgactttggaccagagtttaccgttcttgatgttgatggtgaagacccacatactggtataattgcatccatcagcaatgacaaccctgcgttggtgtcctgtgtagatgatgaacggcttgagtttcaggacggtgattttgtggttttctctgaggtccatggtatggctgagttaaatgatggaaaaccaaggaaggttaaaaatgcaaggccattttcattttgcattgaggaagatacaactaaatatgacatgtatataaaaggtggaatcgttacacagatcaaggagccaaagatactacgattcaagtcactaagagatgctatgagagatcctggagatttccttctgagtgacttctctaagtttgaacgttcccccgtgcttcacctagcatttcaagctctggataagtttaagaaagaatatggacgctaccctgctcctggttgtgagcaggatgctcaaagtttccttaagtgtgctgctgatattaacgaagccttaactgatcacaagctggatacaattgatgagaagttattcagacatttcgcaagtggttctcgagctgttttgaaccctatggctgcaatgtttggtggtattgttggtcaagaagttgtgaaggcatgttcaggaaaattccatcctctctaccagttcttctactttgattctgtcgaatccctgccaacgtatccacttgactctgaagacatcaaaccgtcaaacagccgctatgatgctcagatctctgtatttggttccaaacttcagaagaaactggaagaggcaaatacttttgttgtggggtctggtgcccttggatgtgaatttttgaagaaccttgctttaatgggagtgtcttgcagccctaagggaaagctaactataacagatgatgatgtcattgagaaaagtaatttaagccgccaatttctgttccgtgactggaatatcaggcaggcaaagtctactgtggccgctgcagctgccagtgctatcaaccccaacctctgtattgatgctctccagaaccgtgcttgtccagatacagagaatgtgttccatgacacgttctgggagggtttagatgttgtcatcaatgcgcttgataatgttaatgccaggatgtatatggacatgagatgcctgtacttccagaaggcattgttggagtcaggaacattgggtgcaaagtgcaatacgcaaatggtgattcctcaccttactgaaaattatggggcttcaagagatcctccagagaagcaggcaccaatgtgcacagtccattcttttccgcacaatattgatcattgcttgacttgggcacgctctgagtttgagggtttgctagagaagacaccaggtgaagtaaattcatttctctctaatccggctcaatatgctgctgccatgaggaaggcaggtgatgcccaagctagagaattgctcgagcgtgtttctgaatgtcttggcaaagagcgttgcagtttgtttgaggattgcataagatgggccagactgaaatttgaggactatttctcaaaccgtgtgaagcagctcacatttacctttcctgaagatgctgccactagtacgggtgctcctttctggtctgcccccaagcgcttccctcgcccactgcaattttcagtctctgatccctcccacattcactttattatgtctgcttcaatactgagagctgagtcatttggaattgctataccggactgggcaaagaacacaagtaagctggctgatgcagtaagtgaagttgccgttcctcaatttgagccaaagaaaggggtcagtattgtgacagatgagaaagctactagcctttccagtgcctcagttgatgatgttagtgttattgatgaccttcttgctaagttggaagaatgtgccaagaggttacctccaggattccaaatgaaacctatccaatttgagaaggatgatgacaccaactttcacatggatctgatctctggatttgcaaatatgcgcgcaaggaactacagcattccagaggttgacaaattgaaggctaagttcattgctggaagaatcatcccagctattgcaacttcaacagcgatggcgacaggactggtctgtcttgagctatacaaggttattgctggcgagcaccccattgaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacctgttccacccaaggtgatgaagcatcaagacatgagctggactgtatgggacagatggtccatcaagggcaatctgactgttgctgagctcctgcaatggttcagcgacaagggccttaccgcttacagcatttcctgtggcacttcgctgctgtacaacaacatgttcgcaagacacaaggagagattgaacaagaaggtggtagacgtggccagagaagtcgccaaggtggatgttcctgaatacaggaagcatttggatcttgtggcggcctgcgaggatgatgatggaaacgacatcgatattcctcttgtctcagtttacttccgatag</cdnaseq>

Protein Sequence

<aaseq>MLPTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHS RQLAVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSVTLHDVKNVEMWDLSA NFFLSENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSKFQAVVFTDIGLDKA YEFDDYCHSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGEDPHTGIIASISNDN PALVSCVDDERLEFQDGDFVVFSEVHGMAELNDGKPRKVKNARPFSFCIEEDTTKYDM YIKGGIVTQIKEPKILRFKSLRDAMRDPGDFLLSDFSKFERSPVLHLAFQALDKFKKE YGRYPAPGCEQDAQSFLKCAADINEALTDHKLDTIDEKLFRHFASGSRAVLNPMAAMF GGIVGQEVVKACSGKFHPLYQFFYFDSVESLPTYPLDSEDIKPSNSRYDAQISVFGSK LQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLF RDWNIRQAKSTVAAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDN VNARMYMDMRCLYFQKALLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVH SFPHNIDHCLTWARSEFEGLLEKTPGEVNSFLSNPAQYAAAMRKAGDAQARELLERVS ECLGKERCSLFEDCIRWARLKFEDYFSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPR PLQFSVSDPSHIHFIMSASILRAESFGIAIPDWAKNTSKLADAVSEVAVPQFEPKKGV SIVTDEKATSLSSASVDDVSVIDDLLAKLEECAKRLPPGFQMKPIQFEKDDDTNFHMD LISGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHP IEDYRNTFANLALPLFSMAEPVPPKVMKHQDMSWTVWDRWSIKGNLTVAELLQWFSDK GLTAYSISCGTSLLYNNMFARHKERLNKKVVDVAREVAKVDVPEYRKHLDLVAACEDD DGNDIDIPLVSVYFR</aaseq>

Gene Sequence

<dnaseqindica>346..571#839..1056#1158..1952#2027..2895#3138..3570#4084..4680#gccgccgccgcctcctcctcctctacactgcttcttcctctctcactcgcactcccccacttttcccaacccaagaagctaatcctcctccaactccaaggggaaacggaaacctagccgccacgctaagcatctcgtctcgtctcctctccgcggaggaggaagatcccttcctttccctcgccggtgaggtcgccgcccgccacaggtaagcatcgcatcgcatcgcatctattccgattgtgctactactacttatgggggatctgcgctgtttcatgttccaatctcaatctggacttggcgatgaggtgcttacggtttctgcgcaggggcttgctctccatgcttcccaccaacaagagagccgccggcacggacgacgaccgccccaccgaccccaagagacccaaggtcgcccaaaacgggagcacgaatggagtggtggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcagagattggttcgtctttctatccactcactctgttcgtcctctgtttctttctgttccagattgctttcaactgtctcctcatcacaagtatgcaacatggattcgattctataacaaaatcatgtccccgcatcattttttttttccgattttaacatgtattccgtagaatggattcgattgtaacttgtttatgctaccttacttcagtttcatatattgccaacaatatgcaactctcgtgtattaaacaaatgtgttgcgttcctgcagccaagaaccttgctcttgctggggtcaagtccgtcaccctacatgatgtgaaaaacgttgagatgtgggatttgtctgccaatttctttttatctgaaaatgatattggcaaaaacagggctgctgcttgtgtatccaagctgcaagagctcaacaatgctgttcttgtctctgctctaacagaggaactgaccacagaccacctgtctaaattccaggtttgttgcacttgcagtatcttgccatatgatgaatggtcacatatattccatgcatctctgatatgcctgtctaacccatagttttatctggatggcaggctgttgttttcaccgatataggtttagacaaggcctacgaatttgatgactactgtcacagccactgccctcctatttccttcatcaaagctgaagtttgtggtctctttggtactgtcttttgtgactttggaccagagtttaccgttcttgatgttgatggtgaagacccacatactggtataattgcatccatcagcaatgacaaccctgcgttggtgtcctgtgtagatgatgaacggcttgagtttcaggacggtgattttgtggttttctctgaggtccatggtatggctgagttaaatgatggaaaaccaaggaaggttaaaaatgcaaggccattttcattttgcattgaggaagatacaactaaatatgacatgtatataaaaggtggaatcgttacacagatcaaggagccaaagatactacgattcaagtcactaagagatgctatgagagatcctggagatttccttctgagtgacttctctaagtttgaacgttcccccgtgcttcacctagcatttcaagctctggataagtttaagaaagaatatggacgctaccctgctcctggttgtgagcaggatgctcaaagtttccttaagtgtgctgctgatattaacgaagccttaactgatcacaagctggatacaattgatgagaagttattcagacatttcgcaagtggttctcgagctgttttgaaccctatggctgcaatgtttggtggtattgttggtcaagaagttgtgaaggcatgttcaggaaaattccatcctctctaccaggtttgtgttatgactcatctgttgcttttatgataatccattgaccctgtctgatagaactcaattttatgtagttcttctactttgattctgtcgaatccctgccaacgtatccacttgactctgaagacatcaaaccgtcaaacagccgctatgatgctcagatctctgtatttggttccaaacttcagaagaaactggaagaggcaaatacttttgttgtggggtctggtgcccttggatgtgaatttttgaagaaccttgctttaatgggagtgtcttgcagccctaagggaaagctaactataacagatgatgatgtcattgagaaaagtaatttaagccgccaatttctgttccgtgactggaatatcaggcaggcaaagtctactgtggccgctgcagctgccagtgctatcaaccccaacctctgtattgatgctctccagaaccgtgcttgtccagatacagagaatgtgttccatgacacgttctgggagggtttagatgttgtcatcaatgcgcttgataatgttaatgccaggatgtatatggacatgagatgcctgtacttccagaaggcattgttggagtcaggaacattgggtgcaaagtgcaatacgcaaatggtgattcctcaccttactgaaaattatggggcttcaagagatcctccagagaagcaggcaccaatgtgcacagtccattcttttccgcacaatattgatcattgcttgacttgggcacgctctgagtttgagggtttgctagagaagacaccaggtgaagtaaattcatttctctctaatccggctcaatatgctgctgccatgaggaaggcaggtgatgcccaagctagagaattgctcgagcgtgtttctgaatgtcttggcaaagagcgttgcagtttgtttgaggattgcataagatgggccagactgaagtatgtctctcctgcttgccattgctatattatttttattatatttttgttggccctttcttcttgacaagaaagattagtttagcccactattaataaattgtctgagttagtcctttgcactgttaaatcagcttttgtgtttcctgtgaagactagtacagttaaggctggtgcaattttatggctccgttttcccttttcacaagttgaaaattttccttttgttttgttcttggcagatttgaggactatttctcaaaccgtgtgaagcagctcacatttacctttcctgaagatgctgccactagtacgggtgctcctttctggtctgcccccaagcgcttccctcgcccactgcaattttcagtctctgatccctcccacattcactttattatgtctgcttcaatactgagagctgagtcatttggaattgctataccggactgggcaaagaacacaagtaagctggctgatgcagtaagtgaagttgccgttcctcaatttgagccaaagaaaggggtcagtattgtgacagatgagaaagctactagcctttccagtgcctcagttgatgatgttagtgttattgatgaccttcttgctaagttggaagaatgtgccaagaggttacctccaggattccaaatgaaacctatccaatttgagaaggttagtattttaagtacaagtttctgcaagtctaggtttaagatacttgttgatatatatccacctagttcaatatagttcaagtgtccctagttacactggatctgttgtttttccacttccttgctgatgtttgatatatcgacgtaccacatctctagtcacttgtaatgcatggcttgtacttattaccatcgttattagttagcacaatatttcaaatcatggcttctgtactttggagatgtatgtatgttagtacaatctggtgaatcgtgaggatatgtatttggttattagctccttgttcttccttagaatgacatattagaaaattttcttcctcttggttggctgtgtagcttctgttgtccatatgcatacaacagaaattcctatttccttgaacatgaaaagctgatatactagcaatgtttgtgtcgaatgtttgccaccctcaaaaactactgatgcatgagctatttgatattaaatttcgctttgcttttacaggatgatgacaccaactttcacatggatctgatctctggatttgcaaatatgcgcgcaaggaactacagcattccagaggttgacaaattgaaggctaagttcattgctggaagaatcatcccagctattgcaacttcaacagcgatggcgacaggactggtctgtcttgagctatacaaggttattgctggcgagcaccccattgaagactaccgcaatacatttgcgaacctggcactgccactattctcaatggctgaacctgttccacccaaggtgatgaagcatcaagacatgagctggactgtatgggacagatggtccatcaagggcaatctgactgttgctgagctcctgcaatggttcagcgacaagggccttaccgcttacagcatttcctgtggcacttcgctgctgtacaacaacatgttcgcaagacacaaggagagattgaacaagaaggtggtagacgtggccagagaagtcgccaaggtggatgttcctgaatacaggaagcatttggatcttgtggcggcctgcgaggatgatgatggaaacgacatcgatattcctcttgtctcagtttacttccgatagctagtcaaacctcccctagcagctgagctgatcagaggagaacaaaaaagaagaaaagaaaacatcgctactcttaagattagttcggtcatagactcattaagattagttcacttatagactcgcaaaaaatgaaaaatatgatataagttgcttatttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0692900, RefSeq:Os07g0692900