Os07g0693700

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Revision as of 08:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0693700| Description = WD40-like domain containing protein| Version = NM_001067267.1 GI:115474266 GeneID:4344388| Length = 8161 bp| Defini...")
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Gene Name

Os07g0693700

Description

WD40-like domain containing protein

Version

NM_001067267.1 GI:115474266 GeneID:4344388

Length

8161 bp

Definition

Oryza sativa Japonica Group Os07g0693700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:30182601..30190761

Sequence Coding Region

30182656..30182688,30182794..30182921,30183086..30183170,30183508..30183561,30183809..30183900
,30184017..30184120,30184548..30184623,30184968..30185415,30185611..30185946
,30186039..30186242,30186332..30186430,30186526..30186598,30187110..30187237
,30187351..30187636,30187726..30187952,30188033..30188160,30188790..30188904
,30189340..30189395,30189532..30189625,30189703..30189889,30189966..30190046
,30190121..30190221,30190304..30190366,30190537..30190644

Expression

GEO Profiles:Os07g0693700

Genome Context

<gbrowseImage1> name=NC_008400:30182601..30190761 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:30182601..30190761 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcgcctcctccacaaggctcttcatcagggagagggaggaactcatgtagatgtggcacagatggacgcgcagatcgcccttcactacggcatcccgtacaccgcatcgctcctcgcctttgaccccgtccagcgcctcctcgccctcgccacactggacggtaggattaaaatctttggaggcgataacatcgagggcctccttatatcacccaacagtctcccatacaagtttttgcagtttatacagaaccaggggtttctgattgccatctctaatgagaatgaaatccaggtatggaatcttgagttcagacaactattttattcttcgaagtgggacatcaatataactgcttttgcagttgtagaggggacatttctgatgtaccttggagatgagaatggcctgctttcggtactgaagtatgacgttgatgatgggaaacttcaaaagatgccctacaatgttccgatacattccttagctgaagcagcttgcgtttccttagaggatcctcaatctattgttggaatactgccgcagcctgatacctttgggaccagggtgctgattgcatatgagaaaggactattagttctttgggatgtatcagaggatcgtgctatttcggttagaggctatggtgatttgcacatgaagaatcaaatcacaggtgcacagagggatgctggtgaagatgaagacaataatatcagcgcagaagaagagagagaaatttgctccctttgttgggcatcgcaaggaggttcaactgttgctgttggttatataactggagacattcttctgtgggatatgactgcaagatcctctaaacaagacaatagaagtgatgaaccatctaatgttgttaaacttcagctggcttctggtagtcgtaggcttcctgttattgtattacactggtcttctcgttctgctgattctaacaaaggagggcatctctttgtatatggtggtgatgatatgggttccgaggaagttctgacggttctaagcctggaatcaactactggattagagtcaacaagatgtatgtcacgaatggatctcagacttgatgggtcctttgctgatatgattttaatttcagatagcgggtttccgtataaaagccgaacatctgcagttttcattttgacaaatcctgggcaattgaatttttatgatggtggtgctctattttctgttccaaaatcagaagagggaaaagctcagattgaagcacaaaaatttccagtcacagttccaacaactgatcccaacataacagtcactaatctttattcactaaatggaagggaatctcaaagtattccacttaagaaatttgttgttaagcaaaatgccgcacctttcatgcaacggaacatgaaatggcgtttgactggtggagttcctagtgaaatgtcaatgaacgagaattacaccgtggaaagaatatacattgcagggtatcaagatagttctgtgagaatatgggatgcaacctttccagttctgacgccaatgtttgtcttggatggaaaggtggttggtgtaaatatggatggagaaaattccgctgtatcatcacttgctttttgctcattaaacatgacattggctgttggcacaacaagtggtctggttcgcatctataagcttcgtgaacacactggaggttcaagctttcattttgtgagtgaatctaagcaggaagttcatgttgttcaacatgggagaggatttcattgtcatgttgcctttctggcctcaaattcccctgtgaggtctctcagatttacagcttcgggggaggtccttgcagtgggatatcaaaacggtcagctggcaagttttgatgccaatcaactttcaattatgttcactgtggactgtgcatcaggaacaaattctcctgttgtttcattgagcaattacaatgtggttacatctgccgcaaaggcaaacgagcaacaaaaggagagtcttcaaagtgcaaagtcccctgcaaatgttctactttccttgactaaggatggacattttactgtacatgacagcatgaatggtctgacaataaattcatgtgtgttagatcagaagcagctatctgcaatttccatgtatgtcatagatggaacgtcagaggaggaacagaaccaattatcagaagacaaattcccaagtcaaggtcatattgcaaaagaggaaagtgttctggacaaaaaacaaacacacacagttgataagagccagaaaaatactcggcaaccttcgcacagtggtggttcagattcatttcttttggtttgctgtgaggacctggttcttttattttctctgccatcgctgattcagggaagtaacaagcctctacataggatcaaacttgcgaagcactgctgctggtcagcagttctcacaaatatagatggtaaagcttgtggatttatattagtttatcaaacgggcgcaatagaactgagatctctgccagagctggctattcttgctgaaagctccttaatgtcgttatcaaggtggagttacaaggcaggcatggagaaatctatgagctccgcaaatggacagattgctctggtaaacgggtctgaacttgcaatcatctctcttatagcctcagagaatgccttcaggcttccagagtcaatgccatgccttcatgacaaagtacttgcagcagctgctgaagcagctattaatgcctcaatggaccagaaaagaaaccagactccagcaggaggaattcttggtggcatcattaaaggattgaaaggcaaagaagaaaatgcaaaacagaaaggaagtttaagtgcacaaaccatgagcgaacagttggaatcgattttcttgaaagaatcacttgttgaaccatcaatacccgatcctgacgaccccatagaagaactgtcaatagacgacatagatatcgatgatgaaattccactagcacccccaccagcatcatctacatctcatgtgaataaaaaaacaacagctgaggaggagagagcaaagctatttgaaggatcaagcaatgttgaaatgccaagaatgagaactcaccaagaaattctcaccaaatataagtttggcggggatgcggcggcggcggctgctcatgcaaaagataagctcatgcagcgacaggagaaactagagagaataagccaacgaaccgcggagcttgagagtggagcagagaattttgcttccctggcccaggagcttgcgaaatcaatggagaacaagaaatggtggaagctataa</cdnaseq>

Protein Sequence

<aaseq>MKRLLHKALHQGEGGTHVDVAQMDAQIALHYGIPYTASLLAFDP VQRLLALATLDGRIKIFGGDNIEGLLISPNSLPYKFLQFIQNQGFLIAISNENEIQVW NLEFRQLFYSSKWDINITAFAVVEGTFLMYLGDENGLLSVLKYDVDDGKLQKMPYNVP IHSLAEAACVSLEDPQSIVGILPQPDTFGTRVLIAYEKGLLVLWDVSEDRAISVRGYG DLHMKNQITGAQRDAGEDEDNNISAEEEREICSLCWASQGGSTVAVGYITGDILLWDM TARSSKQDNRSDEPSNVVKLQLASGSRRLPVIVLHWSSRSADSNKGGHLFVYGGDDMG SEEVLTVLSLESTTGLESTRCMSRMDLRLDGSFADMILISDSGFPYKSRTSAVFILTN PGQLNFYDGGALFSVPKSEEGKAQIEAQKFPVTVPTTDPNITVTNLYSLNGRESQSIP LKKFVVKQNAAPFMQRNMKWRLTGGVPSEMSMNENYTVERIYIAGYQDSSVRIWDATF PVLTPMFVLDGKVVGVNMDGENSAVSSLAFCSLNMTLAVGTTSGLVRIYKLREHTGGS SFHFVSESKQEVHVVQHGRGFHCHVAFLASNSPVRSLRFTASGEVLAVGYQNGQLASF DANQLSIMFTVDCASGTNSPVVSLSNYNVVTSAAKANEQQKESLQSAKSPANVLLSLT KDGHFTVHDSMNGLTINSCVLDQKQLSAISMYVIDGTSEEEQNQLSEDKFPSQGHIAK EESVLDKKQTHTVDKSQKNTRQPSHSGGSDSFLLVCCEDLVLLFSLPSLIQGSNKPLH RIKLAKHCCWSAVLTNIDGKACGFILVYQTGAIELRSLPELAILAESSLMSLSRWSYK AGMEKSMSSANGQIALVNGSELAIISLIASENAFRLPESMPCLHDKVLAAAAEAAINA SMDQKRNQTPAGGILGGIIKGLKGKEENAKQKGSLSAQTMSEQLESIFLKESLVEPSI PDPDDPIEELSIDDIDIDDEIPLAPPPASSTSHVNKKTTAEEERAKLFEGSSNVEMPR MRTHQEILTKYKFGGDAAAAAAHAKDKLMQRQEKLERISQRTAELESGAENFASLAQE LAKSMENKKWWKL</aaseq>

Gene Sequence

<dnaseqindica>56..88#194..321#486..570#908..961#1209..1300#1417..1520#1948..2023#2368..2815#3011..3346#3439..3642#3732..3830#3926..3998#4510..4637#4751..5036#5126..5352#5433..5560#6190..6304#6740..6795#6932..7025#7103..7289#7366..7446#7521..7621#7704..7766#7937..8044#gtcgccgtcgccgtcgccggcaagttaatccatctctgctctgctctccgatgagatgaagcgcctcctccacaaggctcttcatcaggtgctacctcgctccgatccaacagccaacagctgcgctttgcttgctttggattctcaattaatattaatttcttcctcctctttatttgctgttttgctgcagggagagggaggaactcatgtagatgtggcacagatggacgcgcagatcgcccttcactacggcatcccgtacaccgcatcgctcctcgcctttgaccccgtccagcgcctcctcgccctcgccacactgtccgttcctcttcttctgccttctcatactcaaccttcattcatggattcagtcctcgactagacttttttttttattactgctctccttgttaaagttatttcttcttcgctataaatctatatatgctgatcatagcctttttctctacctcaaattgcagggacggtaggattaaaatctttggaggcgataacatcgagggcctccttatatcacccaacagtctcccatacaagtttttgcaggtttgcccatgcatatctctcaactaacagctctgccaaatcaaatgtgcccacgctttttcttctttcaacagcggaattttaggatttttttcttctttttggaactaccaggacagcaaagctctgcggaatttttggataactgttttttttttcttgtgcttgcatgctgcagcctttttcttaaattttgtggccgtgctctgcccttttagtcttcattctacttcatgtctgctacttactatgttaaactaactgtctgcattgattcataactacttgttcctgttgcaattgccaaagaacaaactaatacatttctcttttgcagtttatacagaaccaggggtttctgattgccatctctaatgagaatgaaatccaggtagtgccgtgagcaattcacatataattcttttgctcaaattaattcttcttatataatacatgtgtgctgttgtttcacttaataaggatgtcaattgttgcctaactcttcaagtttgcaagcatcctatctgtttttgtttagttatgcttacttgaatcatatattgttactctatcctcatttcacaagaatgttgccagtgctagggactgtttgcatataatacatgtgtatcttgtaggtatggaatcttgagttcagacaactattttattcttcgaagtgggacatcaatataactgcttttgcagttgtagaggggacatttctgatgtgagctatatatatggaaacttgtcttccccaccgctttagtttattaggccagtgtacctgttggagtagtttgtagccttttcttgtatgctaaatccttttgctgcattcaggtaccttggagatgagaatggcctgctttcggtactgaagtatgacgttgatgatgggaaacttcaaaagatgccctacaatgttccgatacattccttagctggtatgcaattgtcccttttgtgtctttgtcaataagtgtttgtgttaattttacaccatcatatatagatggcttagctgttatacaatttgcttctattggtaactatgcacaaaactctaatcctgagcaaacaagatcataatatattacactaaagtttgaaccttccatagaaatatttgaccttgggcccacctgtgtaaataaataatcttatttactgcgagcacaggcatttttgttcatgctttcttgcaattttgcgttgttcttcatctggattaccagaagcacttgttatctgcatagtatgcccaattgagttcaccgattagctggtccaaatcatttactgacaccttttcagtgaatcgtcttaacatagtttgcacttattgacatttttggtttaatttcttcacagaagcagcttgcgtttccttagaggatcctcaatctattgttggaatactgccgcagcctgatacctttgggaccaggtaaggtcttcttatggtcaatactcaaccacatctggttagtgtcatttcctttttgttaacaaacatcaagatagtatgaattaggtataagaaataacctcacttctctttttgactttttattacttgttagcatgaaaacatttcaggaatgacaaattacagaaccatatgttctgaaaaaaagtgccaagtaaaaaacacacacacacacacatttgaagcagatagtttgaaatatgcactgtagctttatttcattcctttactcccatgcgaggctggatcaattcattttgccaatctggaatacataaaataaactgttttaaatgtttcagggtgctgattgcatatgagaaaggactattagttctttgggatgtatcagaggatcgtgctatttcggttagaggctatggtgatttgcacatgaagaatcaaatcacaggtgcacagagggatgctggtgaagatgaagacaataatatcagcgcagaagaagagagagaaatttgctccctttgttgggcatcgcaaggaggttcaactgttgctgttggttatataactggagacattcttctgtgggatatgactgcaagatcctctaaacaagacaatagaagtgatgaaccatctaatgttgttaaacttcagctggcttctggtagtcgtaggcttcctgttattgtattacactggtcttctcgttctgctgattctaacaaaggagggcatctctttgtatatggtggtgatgatatgggttccgaggaagttctgacggtttgtcccttgtttcgttttcctttgttcctgttgttctttttctccctgctattttataggcatggatgtgcgcaatttatttatcctcaagtgaactcaaatgtagtttatttttggatcctttgcctgctactttaatttttaaaacaattttcttgcatttaaaaaaccagaccttgtattttcttgcaggttctaagcctggaatcaactactggattagagtcaacaagatgtatgtcacgaatggatctcagacttgatgggtcctttgctgatatgattttaatttcagatagcgggtttccgtataaaagccgaacatctgcagttttcattttgacaaatcctgggcaattgaatttttatgatggtggtgctctattttctgttccaaaatcagaagagggaaaagctcagattgaagcacaaaaatttccagtcacagttccaacaactgatcccaacataacagtcactaatctttattcactaaatggaagggaatctcaaagtattccacttaaggtacaattatgcatttattttggatactttaacctaataagacttcatcgtgtggcttttattagatcacatctgtacggctttttctgtagaaatttgttgttaagcaaaatgccgcacctttcatgcaacggaacatgaaatggcgtttgactggtggagttcctagtgaaatgtcaatgaacgagaattacaccgtggaaagaatatacattgcagggtatcaagatagttctgtgagaatatgggatgcaacctttccagttctgacgccaatgtttgtcttggatggaaaggtcagttgtgctgtgttattgcttgtgttgttccctgttgacaaataactaacatgttaactcatgcaagttattactatttaccacaggtggttggtgtaaatatggatggagaaaattccgctgtatcatcacttgctttttgctcattaaacatgacattggctgttggcacaacaagtggtctggttagatcagatctttattttacagatcagtccaattggttggttattgaatgctgacagtatattcaaattcagtatctcttatgttattgtaggttcgcatctataagcttcgtgaacacactggaggttcaagctttcattttgtgagtgaatctaagcaggaaggtatacatttcatagaagtcctatttgcatgtgtttcttttttcttgtgcgtgatcatctcttccatatgcacatactgctgccagatttttaccaagataagtttatgctaattgtcctttatttttcaaaacacataaaaaacacgtctacctcataagatagtctgtcaagcagaggtcataccatgcttcttttgcaaatgagaagcgtatggtggacaagagatcctagctttagtcagtctgaatgctttttttaaaataaataaataaatagaatactgatcatgattaaaaaaaacttccgccttgtgcattagcagtcatgccttaaattgatcgaacctattcatgttgatttttgctgtggttcaaatatttgtacttgtgcttaaaatggtaggcaggtctgtagtatgtctgcttggaatcactatagttttttcccctgtgaatgtgtgatccatttcatcttccttaacgagtgtctcatgtgatttttctcacagttcatgttgttcaacatgggagaggatttcattgtcatgttgcctttctggcctcaaattcccctgtgaggtctctcagatttacagcttcgggggaggtccttgcagtgggatatcaaaacggtcaggtataatctactacttattttgtaatacattttgtctcaaagatttaaaccttgtgttgatcagctgttactattaactaataattattgttttctggcttgttttctgaaagctggcaagttttgatgccaatcaactttcaattatgttcactgtggactgtgcatcaggaacaaattctcctgttgtttcattgagcaattacaatgtggttacatctgccgcaaaggcaaacgagcaacaaaaggagagtcttcaaagtgcaaagtcccctgcaaatgttctactttccttgactaaggatggacattttactgtacatgacagcatgaatggtctgacaataaattcatgtgtgttagatcagaagcagctatctgcaatttccatgtatgtcataggcaagtgattactattcaattctttaaggtggtggtcgccttctttctcctttaaatcaatacataactttcttaagttttggatttagatggaacgtcagaggaggaacagaaccaattatcagaagacaaattcccaagtcaaggtcatattgcaaaagaggaaagtgttctggacaaaaaacaaacacacacagttgataagagccagaaaaatactcggcaaccttcgcacagtggtggttcagattcatttcttttggtttgctgtgaggacctggttcttttattttctctgccatcgctgattcaggttcatacttggttatatcaactgttttattgaaattgcaaacttccatagcttacctgtgatgctcttttcaacatcagggaagtaacaagcctctacataggatcaaacttgcgaagcactgctgctggtcagcagttctcacaaatatagatggtaaagcttgtggatttatattagtttatcaaacgggcgcaatagaactgaggtaactctgacttttgccgatttccctgttcttttttcacaccatatacaggatcttagtttgtttttatgacaatttttggcatgctgaattttatgaagatttttgatattttgactttttagtataattttaatagtatatggataaacttatagtgtgtatgatcaatgtattgttggagagaatgtgcctttctctttatactagagcgcattcctcaagtcaggaaacatgactaactacagctttgattgtccacctcaaatactacaagtaaaatctgagaattgtagtgtaggtaagaaaggagaaatgttagtatagatctcatgggaatatggtttagttatatgaaaggaaagagagtcataaattattgttttaaatctagaccatattcttaagttttaatctggaaagttctgtaagtccttaattgggaggtccaatcctggctgtcccagcccaatcctcaccaagaccagttcattttcgttgttggtattgggccctcccatactatgcctgagtgatgtgatcttcactgcgagcatgtatgcatacatcaatgcaagagcctggtaatttttgttgaaaaataattatcttacttttatcatgagcagatctctgccagagctggctattcttgctgaaagctccttaatgtcgttatcaaggtggagttacaaggcaggcatggagaaatctatgagctccgcaaatggacagattgctctggtaaatcgttttgctttgagctgtaaattggtcctaagggttcggttggtttatgccaaataatacattgaactttggtgtcacatatcgccagatgtttgttgattccttttttctgttgtttctggaacgtttatatttgagcgcatgctcaccgtgccaactggcaagaacagttgaagttgactttcgctagtaaaagtcacctctaatcaattccatctttaataggaaactcaagatttaatttagaatctccaggtccatctacctattacaatgttacatagtgtggccacagtacatgcgaatgtaactaatgcattagcgcacaatacacctttttttcacaatccactaatcatccttgatccagtgggaaatgttcggggaagaaatccatcattttttattctgatcttccctctgccacaggtaaacgggtctgaacttgcaatcatctctcttatagcctcagagaatgccttcaggtacttggcttttctggcatgtcttctgtgtagtttttttttcctgtttcagttcgatctgctatttaggttaagaagcatagtcccgacatatgaccatgcactgatattttggcattcacaattatcattttaggcttccagagtcaatgccatgccttcatgacaaagtacttgcagcagctgctgaagcagctattaatgcctcaatggaccagaaaagaaaccaggtttggccttgttagatcttctatgtatcatcatcacctgtgtacaatttggcatgacaatgaaaattcatctgtagactccagcaggaggaattcttggtggcatcattaaaggattgaaaggcaaagaagaaaatgcaaaacagaaaggaagtttaagtgcacaaaccatgagcgaacagttggaatcgattttcttgaaagaatcacttgttgaaccatcaatacccgatcctgacgaccccatagaagaactgtcaataggtcatcttcctccctgtctatctgaaagcatttgcccttaagtactgcctatttatttgaaagcatttgaatgcagacgacatagatatcgatgatgaaattccactagcacccccaccagcatcatctacatctcatgtgaataaaaaaacaacaggtcagttgggcatatagttgtttgactttttaagaggtacacttgtcgtcaactatgcacgtttatgtttgcagctgaggaggagagagcaaagctatttgaaggatcaagcaatgttgaaatgccaagaatgagaactcaccaagaaattctcaccaaatataagtttggcggggtaattccatttcaaaactgtggttctaatcatggttcctatgtgtgtacctaagctaacccaaatctatatctcattgcaggatgcggcggcggcggctgctcatgcaaaagataagctcatgcagcgacaggagaaactagaggtgagagagtacatttcaatactttgtgctttgcaccttttccattggtgtcacccctagcctagaccttcatatacgttaggcaccgatatttgaagttgtggtttttatggagtatattaagaaaacgttgatgaatactactaactagctcatcattggtttaccagagaataagccaacgaaccgcggagcttgagagtggagcagagaattttgcttccctggcccaggagcttgcgaaatcaatggagaacaagaaatggtggaagctataattaacgttgttgtgtttgtatatgctgcgtcctacacaaatcaagtaggtccaatccaggcatgacatttacatgtactgattgctgattgccattgattcatattcattgtgtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0693700, RefSeq:Os07g0693700