BGIOSGA022228

From RiceWiki
Revision as of 16:40, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA022228

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022228, complete gene.

LocusTag

OsI_21468

Ensembl Transcript ID

BGIOSGA022228-TA

Ensembl Protein ID

BGIOSGA022228-PA

Length

4620

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1685777..1690396

Sequence Coding Region

1685777..1685953,1687613..1687672,1688008..1688120,1688194..1688404,1688849..1688895
,1688973..1689131,1689283..1689386,1690062..1690396

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1685777..1690396 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1685777..1690396 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAATTCGCTTGGCTGCGTGGGGCTTGGGGAGAGGTTGGCGGCGGCGGCGAAGGACGGCGACGCGGCGGAGGCGCAGCGGCTGCTGGCGGCGAACCCCGGGCTGGCTCGGTGCACCACCTTCGGCAACCTCAACTCGCCGCTCCATGTCGCCGCCGCCAAAGGCCACCACGAGATTGCTGCATTGCTGCTGGAGAATGGAGCAGATGTGAATGCGAGGAACATCTATGGACAGGTGTGGAGGGTGGAGAACCTGAGTGGGCGGACGGCGCTGCACATGGCGGCGGCCGGCGGACATGTCAAGTGCGTCAGGCTGCTGGTGGCGGACGCCGCCGGCGACAGAGACGGGTACGTGAACAAGGCGGCGAACGGCGGCGTGACGGCGCTGCACCTGGCGGCGCTGCACGGGCACGTCGAGTGCGTCCACCTGCTCATCGACGAGCGCGCCAGCCTCGCCGCGCAGACGCTGCCCTGCGCCGCGCCGCCCATGGCATCCATCGGCGCCGGCAGCACGCCGCTGCACTACGCCGCGTGCGGCGGCGAGGTCAAGTGCTGTCAGATACTCGTGTCAAGAGGAGCAGACAGAACAGCCATCAATTGCAATGGGATTGTGGTAGTCAGGTGGCTCCCAATCGACGCAGCCAGAATCTGGGGCTGCAACTGGCTTGAACACGTCCTCTCCCCCAAGTCGCATCTTCCGATCCCCAAGTTCCCTCCTTCCGGCTACCTCTCCCAGCCACTCCCCAGCCTCATCGCCATTGCAAGGGAGCAAGGTCTGAACTTGTCTTCGGAGGTTTCTGATGGCTTCGATGAAGGAGCAGATGCCTGCGCCGTCTGTCTTGAGAGGCCCTGCACTGTAGCTGCTGAAGGTTGCGATCACGAGCTGTGCGTGAAATGCGCGATGGATCTCTGCTCGGTGATCAAATCCTACGACTCGGCGGGGATCGCCGGCGAGATCCCGTGCCCGCTCTGCCGGACCGGGATAGCCTCCTTCCGGACAACCGCCGCCCCGCCGCCGCCGAGCCTCGCCGGGTCGCCCGCCCGCCGCAGCCGCCGCAACAACTCCGGCGGCGGCGGCGGCGAGCACGAGGCCTCCAACTCCGGCGGCAGCGAGAAGGGATACGGCAGCATCGACCCCGACGCCGGCGCCGTCGTCCCCCTCTACTACGCGCCGCCCTTCGCGCCTTCTGCCATCCTGACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGNSLGCVGLGERLAAAAKDGDAAEAQRLLAANPGLARCTTFGNLNSPLHVAAAKGHHEIAALLLENGADVNARNIYGQVWRVENLSGRTALHMAAAGGHVKCVRLLVADAAGDRDGYVNKAANGGVTALHLAALHGHVECVHLLIDERASLAAQTLPCAAPPMASIGAGSTPLHYAACGGEVKCCQILVSRGADRTAINCNGIVVVRWLPIDAARIWGCNWLEHVLSPKSHLPIPKFPPSGYLSQPLPSLIAIAREQGLNLSSEVSDGFDEGADACAVCLERPCTVAAEGCDHELCVKCAMDLCSVIKSYDSAGIAGEIPCPLCRTGIASFRTTAAPPPPSLAGSPARRSRRNNSGGGGGEHEASNSGGSEKGYGSIDPDAGAVVPLYYAPPFAPSAILT</aaseq>

Gene Sequence

<dnaseqindica>1..177#1837..1896#2232..2344#2418..2628#3073..3119#3197..3355#3507..3610#4286..4620#ATGGGGAATTCGCTTGGCTGCGTGGGGCTTGGGGAGAGGTTGGCGGCGGCGGCGAAGGACGGCGACGCGGCGGAGGCGCAGCGGCTGCTGGCGGCGAACCCCGGGCTGGCTCGGTGCACCACCTTCGGCAACCTCAACTCGCCGCTCCATGTCGCCGCCGCCAAAGGCCACCACGAGGTAAGCATACGTCCACAATGAACTGATCACCTCTAGTACAAAAACCATCTCCATTGATGGTGCAGCAAGCTAGCTAAGCTATGAGCTAGCTTCTCCTGTTTTTTTTTCTTTCAGATTGTTCATTGAATCATTGAAATGAATTAATTGCTTGCTGGCTGCTGGCAGTCCTGCTGCACTCATTTTTTTAGAAAAAAAAACTTTTCTTAAAAATATTCATTATATTGCATTGAAGAAACCACTTGTAGTACTTGTTTTAAGATATTAGTTAAGTTTATTTCTATAATAAAATAGATAATTTACTGTAATAATATGCTCAATGATCAAATCACAGACGAGGTAATAGCTAGATTGGTTTGCTATGTTTTTTACTATTAACCAGGCATATGAGTGATGTTGCCCTAGGAACAAGTTTTTTAATCTTTTCGTTTTTAATTAATTTGCCAAAAGAATATATTCAACTGATTTTTTTTGGAAAAAGTTTATACACACACACACACATATGCATGTCATTAAAGAAAAAAAAGAATTCGAAAGAAAGAGAGAGTAAAAAAAAAAGAATTTACTGCTGTCCTGGTAGATCCCATATTAATTATTAATCTTTTAAGTGTTGCGCAAAAAATGGAAATCACAATCAGTCCTAGCTAGCTTTATCCCGCGATGGCTGAATGAGGTGACAGAAAACCTAACGGCAGGATGATTAATTCTTCAAATGACCAATTGATCACTCGTCTCTTAATCTGATTTGCGTGCCAAAAATGAAGAAGAAAACGTCATCATTAGTGAGATGTAACATTTACGCATGCAAGTTGCCTCTATTCATTTTGCGGGTTATTGTTATGCTGATGTGTGTGATTTGTAATTGTGTACCAACACTTATATACTTAAAATTCCTTTTCATGTTGATTGGGAATCGATGCAACTATAAAAGAAAGTGACACTATTAATGGAATTCGTCAATTATCATGCTTCTCCTTTGTAGAACGGTAAAAACTAATTACAAAACAAAAAAAAACAATTATTCATCATGGAAAGAGAGAGAGAGATAAACTAAAAATTTAGTCTAAAAAATGTGTGAAGTTATTTGCTGCAAAATCATTATGAAAAGTATGGCCATGGACCCATACTAATTTGTTCCCCAATCGTACAGCCTAGTACGTTGCACCAGAAAATTTAATGCCGTCGTGTTCAGAAACACTATCAACGAAAAAGGGACGTGGTCGTACGTGTCCGACGTCCCTGACGATTCAGACGACAAATCTTTCGCTAAATCAACTCAAACCATTGTTTATTTTGTCAAAAAAGAGAGAGCAAATTTCATCTGCTGTTCAATCTCTGAACAATTGATATGTTCTGAATTTTGAACAGTTTTGACAGTCTGTTCAACTAACCAACTGTGATGTTATCGATTAAAAGGAGCAAATTTCATCTGCTGTTCATTCTCTGAACAACTGATATGTTCTGAATTCTTATCAGTTTTTGACAGTCTGTTCAACTAACCAACTGTGTGCCCAGAATCTTCGGTAATCAGCTCAAATCAATTGTCTTATTATCGATTAAAAGGAGAAAAAAATTCAGCTGCTGTTCAATCTCTGAACAATCGATATGTTCTGAATTCTTACCAGTTTTGACAGTGTTCAACTAACCAAACTGTGTGCTCAGATTGCTGCATTGCTGCTGGAGAATGGAGCAGATGTGAATGCGAGGAACATCTATGGACAGGTGAGCGAACTCAAACTGTACAAGCTTAGCTCTGCACAAGCTAAGCCAAGCCATCGGTTTTTGACTCGAATTAATATCGAGCCGTTTGATCGATCGCCCAACCGACCAACCAGCTAGTCCATGTTTCTGACCTGGATCTTGAATTCTGAATGCACATGGGGATTGATTGAACTGAAGACGCCATTGATGCAAGCTTGCCGGTTCGGTCACTGGGAGGTGGTTCAGACGCTGCTGGTTTTCAGATGCAATGTACAGTAAACTGATTAGCTCCTGCACTTCAGTTAATTGCAACGATTAATCAGTAAATTAGAAATTAACTTTTGTTTTTACTGAAGGTGTGGAGGGTGGAGAACCTGAGTGGGCGGACGGCGCTGCACATGGCGGCGGCCGGCGGACATGTCAAGTGCGTCAGGCTGCTGGTGGCGGACGCCGCCGGCGACAGAGACGGGTAAGCCATTGTTGTTGTTGAGGAGCTCGAGCGAGGTGGCGGCCATGGTGATCTCGAGTTGGTTAATTGACAGGTACGTGAACAAGGCGGCGAACGGCGGCGTGACGGCGCTGCACCTGGCGGCGCTGCACGGGCACGTCGAGTGCGTCCACCTGCTCATCGACGAGCGCGCCAGCCTCGCCGCGCAGACGCTGCCCTGCGCCGCGCCGCCCATGGCATCCATCGGCGCCGGCAGCACGCCGCTGCACTACGCCGCGTGCGGCGGCGAGGTCAAGTGCTGTCAGGTAGTATACGATTCCCTTTTTCTTCCTTTCTTTGATGATAGCCAAATTTAGTGTGTGATAGTGAAAGTTTGGTTGGTATGATTCAGTCATTAATTGAGCAATTAGTCGATTTGAAAAATATTAGTTTATTGTTGATTTGGTTGTTAGTCGGTTAGTGTCGACAATCCCATCAATTGAATAGATGGATGAGTTGAAATGTTAACTCACTCGAGTTAAAACGAATCAGTTAAAAAAGCGAATTCAAGTTTCAGACTGATCATTTCTTGGCCATCGATTTCCTCTCTGAAATAACAGAAACTTCTTCAGGTTTCAGACTGATCATTTCTTGGCCATCATTTTCCTCTCTGAATAACACAAACTTCTTCAAGTTGCTGACTGATCATTTCTTTGAACATCGATTGCTCTCTGAATAACTCCAAAACCTTTCCTGCTGTTCTTGTTCAGATACTCGTGTCAAGAGGAGCAGACAGAACAGCCATCAATTGCAATGGGTAAATTAGCCAGCTCAATTATCCCCCAGATTAATTGTCACTAGCATATCAACAAATTTGATGCTCATCGCTGCAAGGATTGTGGTAGTCAGGTGGCTCCCAATCGACGCAGCCAGAATCTGGGGCTGCAACTGGCTTGAACACGTCCTCTCCCCCAAGTCGCATCTTCCGATCCCCAAGTTCCCTCCTTCCGGCTACCTCTCCCAGCCACTCCCCAGCCTCATCGCCATTGCAAGGTACTTTAACTGATCGCTGATCACCAATGCAATTCTGCAAATTCAATGTGATCTGATCAGTGATATTCAGAACTTGAAATGCACTGAGTTGGAGTGGTGTTTTGTGTGTTGTTTTGTACTATGGTTTTGTTTGGTTTGGTGAGATTTGCAGGGAGCAAGGTCTGAACTTGTCTTCGGAGGTTTCTGATGGCTTCGATGAAGGAGCAGATGCCTGCGCCGTCTGTCTTGAGAGGCCCTGCACTGTAGCTGCTGAAGGTATCATTTTTCTTGTTTATCTCCATCCATGCACAAAAACATTCAGACATCGAGGCAAAGAACTAACTACTCCATCTTGTTATACATATTTGATGTTTATAAGATTCAATCAGACATTTTGATCATCAATAATTTCTCAAATGCTGATTTTAGAAAGAAAAGAATGGCATGCGTAGATTTATCTTGAAAGGTATTATCATAGTATTGTACCTAATTAGATTCTATGAACTTACTCGAATGTAAAATAAAATATGATGCTCAAAATTTCAAAAGTTGAAGTAATATTACTGTAAACTTTAGATATTTGTGAGCGAAAGAAGCAATCGAGTGCTCCCGCCGTTTCATAATATAAGTCGCTCTAACTTTTCTCTTAGTAAAACCTTTTTAGGTTTGACTAAATTTATAGAGAAAAAAACTAGCAATATCTACAACACTAAATTAAATTCATTAAATGTAATATTGTTATATTTTGATAATATGTTTGCACTGTGTTACAAATATTGTTATACTTTTCTATAAAATTGGTTGAACTTGGACTAGGAAAAATGTTGACATGACTTAGACAGTAATTAGGCGGTGAATTTAAATTAACCTGCAATGATTGTATTAGTAATACTAGTAATAGTGTTTTGCTTGGTGAATTAAATATAGTACTTGATCACTTGTGCTGTGCAGGTTGCGATCACGAGCTGTGCGTGAAATGCGCGATGGATCTCTGCTCGGTGATCAAATCCTACGACTCGGCGGGGATCGCCGGCGAGATCCCGTGCCCGCTCTGCCGGACCGGGATAGCCTCCTTCCGGACAACCGCCGCCCCGCCGCCGCCGAGCCTCGCCGGGTCGCCCGCCCGCCGCAGCCGCCGCAACAACTCCGGCGGCGGCGGCGGCGAGCACGAGGCCTCCAACTCCGGCGGCAGCGAGAAGGGATACGGCAGCATCGACCCCGACGCCGGCGCCGTCGTCCCCCTCTACTACGCGCCGCCCTTCGCGCCTTCTGCCATCCTGACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022228