Os06g0101300

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0101300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001063064.1 GI:115465859 GeneID:4339830| Length = 432...")
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Gene Name

Os06g0101300

Description

Zinc finger, RING-type domain containing protein

Version

NM_001063064.1 GI:115465859 GeneID:4339830

Length

4328 bp

Definition

Oryza sativa Japonica Group Os06g0101300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:141315..145642

Sequence Coding Region

141405..142421

Expression

GEO Profiles:Os06g0101300

Genome Context

<gbrowseImage1> name=NC_008399:141315..145642 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:141315..145642 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtctccggcgcatgctcagcgcttctactgccaccagtgcgaccgcaccgtccccatcccgccgcccacctcccccgacgccgacgtcctctgcccgttctgcggtggaggcttcgtcgaggagcttggggaggacatcaaccccaaccccaaccccaaccctagccccttcctgccacaccaccccttcttccccttcgcctccccatccttcgacctccgcaaccctagcgacctcgcggccttcttcgggcccccctccccctccccctccccctccccagccgccaggcacttcgacccctccaacttcctccatgatcacttcaccggcctcctctctggcggcgccaccatccagatcgtcctcgagggctcctccgcctccctccccctcgggggcgccgccgccgggcccggggggatcagcctcggcgactacttcgtcggctctggcctcgagcagctcatccagcagctcgccgagaacgaccccaaccgctacggcacccctcctgccgccaagtccgccgtcgccgcgctccctgacgtcgccgtctccgccgacatgatggccgccgatggaggggcccagtgcgccgtctgcatggacgacttccacctcggagctgccgccaagcagctcccctgcaaacacgtcttccacaaggattgcatcctcccctggctcgaccttcacagctcctgccccgtttgccgcttcgagcttcccaccgatgaccctcaccacgcccacccaacccttggatctcaccgccccgccgcacccgcctctgcctctgcctctccctctccagctccaccacctaggctggctgagagaaggttcaggatatcgctgccatggcctctccgtgctgcgtttggcggccaggcggagagcagcaatcctaccaatcaggatcctgttggtggttctactgatgcttccggttctggcaacaacaatgcaactggaggtcatcgtggctacgatgatcttgactga</cdnaseq>

Protein Sequence

<aaseq>MSSSPAHAQRFYCHQCDRTVPIPPPTSPDADVLCPFCGGGFVEE LGEDINPNPNPNPSPFLPHHPFFPFASPSFDLRNPSDLAAFFGPPSPSPSPSPAARHF DPSNFLHDHFTGLLSGGATIQIVLEGSSASLPLGGAAAGPGGISLGDYFVGSGLEQLI QQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDDFHLGAAAKQL PCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHHAHPTLGSHRPAAPASASASPSPA PPPRLAERRFRISLPWPLRAAFGGQAESSNPTNQDPVGGSTDASGSGNNNATGGHRGY DDLD</aaseq>

Gene Sequence

<dnaseqindica>91..1107#gttagatttaggtctcccccatatccccattcccatctctctctctcgagtctcgacggcggctgctgctgcggcgtcgcctgcggtgcgatgtcgtcgtctccggcgcatgctcagcgcttctactgccaccagtgcgaccgcaccgtccccatcccgccgcccacctcccccgacgccgacgtcctctgcccgttctgcggtggaggcttcgtcgaggagcttggggaggacatcaaccccaaccccaaccccaaccctagccccttcctgccacaccaccccttcttccccttcgcctccccatccttcgacctccgcaaccctagcgacctcgcggccttcttcgggcccccctccccctccccctccccctccccagccgccaggcacttcgacccctccaacttcctccatgatcacttcaccggcctcctctctggcggcgccaccatccagatcgtcctcgagggctcctccgcctccctccccctcgggggcgccgccgccgggcccggggggatcagcctcggcgactacttcgtcggctctggcctcgagcagctcatccagcagctcgccgagaacgaccccaaccgctacggcacccctcctgccgccaagtccgccgtcgccgcgctccctgacgtcgccgtctccgccgacatgatggccgccgatggaggggcccagtgcgccgtctgcatggacgacttccacctcggagctgccgccaagcagctcccctgcaaacacgtcttccacaaggattgcatcctcccctggctcgaccttcacagctcctgccccgtttgccgcttcgagcttcccaccgatgaccctcaccacgcccacccaacccttggatctcaccgccccgccgcacccgcctctgcctctgcctctccctctccagctccaccacctaggctggctgagagaaggttcaggatatcgctgccatggcctctccgtgctgcgtttggcggccaggcggagagcagcaatcctaccaatcaggatcctgttggtggttctactgatgcttccggttctggcaacaacaatgcaactggaggtcatcgtggctacgatgatcttgactgaagagcatcggacaaagaggggatgaggaggtataagttactctatagcttttatatttttttttgtaagatgattacgctaatgttgatacttttacatgctctaccaacagccatattagttttcgagatataaccattcattttagtgttctaatattactacatggattgaaaaagaagggacccttcttttaaccttaagtcatccatttctgatatctgttcaatgacagtttggtgtgctcgatttagattagaggttttcgcgatctataacattcttcgtttatgtgctaaacatccgtgggttgagagttgggaacttgcgcctagggaatgcgtcatgccatgcggtgggagtcagtcttgtgaataaatctgtggctatgcgagtcggctggtaggaaaatgcttcagtaaggcccacatgtatcctcatttatttcagtcgattggccaaacatacacttaattggtggttaatgcttacatgtatttggtatgccacaagatgattggttgcatgtttaaactatcaatagttgattggcagtagtgtgtaatgagacacgtagtatgtgcttaaactggttaatcaagaaatctgagttcttttcatgtattccgatctaatggttcatattatctttcttggtttggtcaatcttaaattctgtatcgtgctagacaagcttgaaaaggaatgtattgttgaccgatggttcatattatctttcttggtttggtcaaactaaaattctgtattgtgctagacaagcttgaaaaggaatgcactgttgaccgatgatttcgaaaggagtttgtgctctgtaggctacagtagtttgatatacttctgccagctttttattggaccacgtggtgcagtaattttttcgatgtgggaggaacatacgtgctcttgatccgtctggatagatctgtacgtcttgatccgtctggatagatccgtacgtcacgctgctgaaaaagggaaaaaggaagaagcaatacgggttcacacacaggctggcatctagctgggccttagattgcttgggccttgctggctggtgaatggtggtcacacacgtaggagtaagggtgcaagcgggcaggcccacgaacccacttatagtataaataagcgggttatccggcgtattatggattacctgcttatttgtactataagtgggttcgtgggcatgcccgcttggtaggagtaggcagataaagaagaaaagagaagtagaaaaaataaaataaagaggtacaaatagttttctgaaattatgagtatgatatactacaggttaagctgtagattgaagcaagtacggtaactacacagacatcctgtatgtctataaaatacgcctaaaaacaaaaaatagaaaaattaaatgtcttcgatcgaacttcttaagcctcggaaatctttttcagaacttatattccactaatactacaaatttggaaggtttatttgcaaaatttttgtgtcttatgaattcgctgcagttttgagaaaacatatctttgtttctccctaatggcatataatcatttgccaaagttaaacacacatccataactcaacaaaattattcacaaatataaattactatgctactttgatccatctcaacattgcaaaaatatttaaaatacattataaggtcttgtggaaattaaactttttctatattatgtacgggctataaataaccggcacgcctaaaggtgcgctgattttctaagacattaagaattaggtcaatatttattgattatataccatcaacctttgctgtattgcatgatcagtgtgtggatgggctttgcgctttggctattgttatttatggttaagtgctaaaatatcctttgtttgaccaaataaccaagttgctaggtttatgcactctacatctactgtggatagaagtaagtgtctgaaaaagtttgatctttgtttttgtagctttatttgattagccagctttaccattttgttattatcaggatacgtttcataatgtcattctagtttctgttgcttcctatctttggttgtgataagcattcaggccccgtttggctaatgggaaagggaaatcatttcccacccactaaaagacatctttaaatcctaaccattcattctccctcttccatttaatcctaaccctttattcatttcccaatcccaatctcaccccagggttaagatatcttattttccctgcatcagatactcaaattaaagcattatttttagtgggtaaccatgtttttcagaaccactcgctctgatgacaatttgttactgctatccacgctcatttttcatatcaagttcagaaactgaaacttccgccccatatagcctgctgccttttccactctattgattatttaatgtattatacaaaacaacctaatcgttgagggatctaattagtctgatgtgttttgcaccctcttgaagtatggtgaatgactgctaatttttgtgacacaagaaatgggaaaatacatgctaagtggactagtttaggagtctgggcggctgggcctgatgaaagttctgtgcgtctcctttgcagaacttagaatctattccgcgagaacactatattttcaaacggagtattaattttggtacaagggctggctaacaatgcagggagagggagcacgtgcatcagtatacacagatgaatgtgcctctgattttagctttcttgctataagttgccctcctgttgtaaattgggcataagtaaattttttctattttgttttgcaaaactattatagtaagcttaagcaccccaatccctttcctgatgcagtgttgatggttttgcttgcaggggcgagggacattgtttggagaagaggtgcgccgcggcaatgaagctagcctattccgttctattcacctatcaatgacgagaagaaatgttggattttttcccccttccttaattgtggcatggatttactattgctggttttggggtcctctggtggtgtagagaattttctatgggggcccttttcttggtgacatggacatagactggtggtgaaaaaaaagaaaggatggtggtggggatgttatacattttaagtactatatgttacttgtcatatatacatatctgggagatctgaaagctttcctctgattgctggcgttggcgagct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0101300, RefSeq:Os06g0101300