Os06g0101800

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0101800| Description = Similar to NAC-domain protein 1-1| Version = NM_001063066.1 GI:115465863 GeneID:4339834| Length = 3201 bp| Definiti...")
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Gene Name

Os06g0101800

Description

Similar to NAC-domain protein 1-1

Version

NM_001063066.1 GI:115465863 GeneID:4339834

Length

3201 bp

Definition

Oryza sativa Japonica Group Os06g0101800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:152418..155618

Sequence Coding Region

154285..154638,154740..154991,155083..155556

Expression

GEO Profiles:Os06g0101800

Genome Context

<gbrowseImage1> name=NC_008399:152418..155618 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:152418..155618 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaacaagggaaagtggagatgacgccggcggtcgccgccgcggcggttctgccggtggggttccgtttccggccgacggacgaggagctggtgaggcactatctgaagggaaagatcgctgggcggagccaccctgacctcctcctcatcccggacgtggacctctccacctgcgagccctgggatctcccggccatgtccgttatcaagtccgacgaccccgagtggttcttcttcgccccccgcgaccgcaagtatcccggcggccaccgctccaaccgctccaccgccgccggctactggaaggccaccggcaaggaccgcctcatccgctcccgccccgccggccccctcatcggcatcaagaagaccctcgtcttccaccgcggcagagctccgcggggcctccgcaccgcctggatcatgcacgagtaccgcaccactgagcctcacttccaatcaggcaaaaacggtagcttcgttctgtatcgcctgtttaacaagcacgaacaagatgatacccataccccggcctccaatttggaccaacaattgtccacgtcttctcaaggcaatccccaaaatggcacacctgctgtccaaccggccctcgcctcaataatgaaggatcatcagaccttaccatcatctggtttcagccaactgactgaaatacaagatgctagtacatctgtccatgacaaagagcaaactgtagcccatgacgatgcttttctggacgtgttatctcaacttccagacctagagcctgagcaaagatacaatggattccctaatatcacctctccaattcgcccttacagcgatcacccttttgtcggcaatctgggtgagcaagatctttcagcgcattttggcagtaccttgtctgagcaggacctgcaaagtttgttgtttagtccaaattacaccaaaatggataagcaccccactggaaacgtagagtctaatcctaccgcgtcgtccaacaatccaaacaataacacattactcatggatagttggaggaagaatgattcatatcagatgcttctaattcaggttagaatattctag</cdnaseq>

Protein Sequence

<aaseq>MKQGKVEMTPAVAAAAVLPVGFRFRPTDEELVRHYLKGKIAGRS HPDLLLIPDVDLSTCEPWDLPAMSVIKSDDPEWFFFAPRDRKYPGGHRSNRSTAAGYW KATGKDRLIRSRPAGPLIGIKKTLVFHRGRAPRGLRTAWIMHEYRTTEPHFQSGKNGS FVLYRLFNKHEQDDTHTPASNLDQQLSTSSQGNPQNGTPAVQPALASIMKDHQTLPSS GFSQLTEIQDASTSVHDKEQTVAHDDAFLDVLSQLPDLEPEQRYNGFPNITSPIRPYS DHPFVGNLGEQDLSAHFGSTLSEQDLQSLLFSPNYTKMDKHPTGNVESNPTASSNNPN NNTLLMDSWRKNDSYQMLLIQVRIF</aaseq>

Gene Sequence

<dnaseqindica>981..1334#628..879#63..536#atataaagtggttctcaaaaaaaaagtgaaagacagagaggtcggagaagggaaaagtggcgatgaaacaagggaaagtggagatgacgccggcggtcgccgccgcggcggttctgccggtggggttccgtttccggccgacggacgaggagctggtgaggcactatctgaagggaaagatcgctgggcggagccaccctgacctcctcctcatcccggacgtggacctctccacctgcgagccctgggatctcccggccatgtccgttatcaagtccgacgaccccgagtggttcttcttcgccccccgcgaccgcaagtatcccggcggccaccgctccaaccgctccaccgccgccggctactggaaggccaccggcaaggaccgcctcatccgctcccgccccgccggccccctcatcggcatcaagaagaccctcgtcttccaccgcggcagagctccgcggggcctccgcaccgcctggatcatgcacgagtaccgcaccactgagcctcacttccaatcaggcaaaaacgtaagcacgaccaaatatatactgtctactccatactctaaatataaatagctgagcaaatcaaatgtgtctatttgctttaatttgtcagggtagcttcgttctgtatcgcctgtttaacaagcacgaacaagatgatacccataccccggcctccaatttggaccaacaattgtccacgtcttctcaaggcaatccccaaaatggcacacctgctgtccaaccggccctcgcctcaataatgaaggatcatcagaccttaccatcatctggtttcagccaactgactgaaatacaagatgctagtacatctgtccatgacaaagagcaaactgtagcccatgtgagtttcttattaattctcctgcattactggtccccatggcatttatatgataataaatttcttttcttttttttcttttgtgtgtgtgtaaaacttaggacgatgcttttctggacgtgttatctcaacttccagacctagagcctgagcaaagatacaatggattccctaatatcacctctccaattcgcccttacagcgatcacccttttgtcggcaatctgggtgagcaagatctttcagcgcattttggcagtaccttgtctgagcaggacctgcaaagtttgttgtttagtccaaattacaccaaaatggataagcaccccactggaaacgtagagtctaatcctaccgcgtcgtccaacaatccaaacaataacacattactcatggatagttggaggaagaatgattcatatcagatgcttctaattcaggttagaatattctagaatttactcttacacattttgactaatctcatgagaacattttcttcccttctatttcctgttctaaacaaagcgtgcagacaacacagatgctacttgctgttcttcttcaatcaatgcaccacaaacagaaacaagtgatgctaatcttgaagcaagagcccagagtagcagcatggtctacagtggagtagccgagggctcccccttgtgcaaccaagatcaactacactccgcattcaatcctcacatggagtcacaaaagagtggagccttctgttgggctggattgtggaccccttatccccagcattggttcgatactatcgtagaaccgggcaggagtggcatgacattttcagatgccttgaaagaacaaggtcaggaacaggcaccttcaatgaagcacttgacagctcaagatctcgttgatccacaacaaggaactgctgcaagaaggatccgccttgtatgctctgttgagagggcatcagtctctcaacctgtatcctcacatttgcagagtgaatatgaagctggatcatgctgtaacactcgcaattcatctaataacaagaaggaaagtgtcaggagtgaagatgaagctggatcatgttgtaacactggaagttcatctaataaccacagcgaggaaaatgacgatgcagcctcccagattatggtactactacagtttattgtaagtctatttactcatagtagtatagttttgattaaaatggtcttgatcaggatggagaaccaatgcatattcagtgcaaagaggatacccctattcaagtggatcattcagtggaagttatggacaagctccaaggcttctcctttcatggtaagcaatctttgttaaattcgtaattagaacttgagacattgaaatttatatcttccacctggcaaaaagaaatttatatcttcctacatatacctcatgaagggtcctggactttttctttcttgctagtgtaaagtggtagtcatcgttaataaatattagtggtgtatttaccaagctagcaagggtatgacatgcattcgcccctagatctcaagtacaattagctaatttgaaaaaggtcaatattggcttgagatgtcattaatgctaagtgtaagaacttgagttttctatatattgaaaaaatatatagtactccctccgttccacattataggatgttttggcctctccatcgctcttctagattcactactattcatatgaatttgaacatatatatgtaacacatacatcgacctatgcatgaacctattcaaaacccaaaacgtcttataatgtgaaagtatgggattttgtccacgaacagtaggtcttcgtctcttatgcggtatagtttagaggatgggatcgtgtggaacatttgtgaaacagactactggagccaatgttgtttgcagggctgttgtggctgagttatttttttctctctgacgatgtagctgatctccttcaatttcccacgtgcagaagagatgttggtacatgctaatcagccccgtggaactaatctaaagcagaggctgttgagagtggagtctagaaatagcaatgagaataatgtaccttcgttggagacacgagaacagcagcatgcacctcatattcagaaatggactagctctgttgtgcgactagggtgggggtggcagtggccggctctctttgtgatggccggctctctgcttttgttggttggtgtgtggaaatctctgaatcacactacctgactaatgtaaataaatggtcgcttagcttaagcttgggagcctcatatatactactacatatgttctttggaaagtactgcaggtaactggttcatat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0101800, RefSeq:Os06g0101800