Os06g0102700

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0102700| Description = Similar to U-box domain-containing protein 14| Version = NM_001063070.2 GI:297605022 GeneID:4339839| Length = 2440 b...")
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Gene Name

Os06g0102700

Description

Similar to U-box domain-containing protein 14

Version

NM_001063070.2 GI:297605022 GeneID:4339839

Length

2440 bp

Definition

Oryza sativa Japonica Group Os06g0102700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:184697..187136

Sequence Coding Region

184804..185025,185121..185237,185324..185737,185827..186888

Expression

GEO Profiles:Os06g0102700

Genome Context

<gbrowseImage1> name=NC_008399:184697..187136 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:184697..187136 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagcgggtggccgacgagatcgcggcgctcccggagccgcgtgggcccctgcgccgcccctgcgccgacctctcccgccgcgtccgcctcctcgccccgctgctcgaccacctccccgcctcctcctcctcctcctcgagtactcccctcgccgacgccctcggggccgcgcgagacctcctccgcaagacccgcgacggcagtaagatcgaccaggccatgcgaggggatgcgttcctggacgaatttgcaggcgtcaacaggcagattcacctcgccttggatgccttgccctacaacaccttccacatgccccaagaggtccaagagcaggtcgcgctcgtccactcccagttccaacgagcctccacaaggacggatcccccggatacacagctttccatggatcttgcttgggctcttaccgacaacccttccgaccccgcccttctcaccaggatctctcacaagctgcagctgcacaccatggctgacatgaagaacgagtccatcgcccttcataacatggtcatttccactgccggagaacctgatggctgtgtcgaccaaatgtcttccctgctcaagaagctcaaagactgcgtcgtcactgaagatcatgccaacgatgccctcaccactaggtctgcctccattaagcataggtctcctatcatcccagacgagtttaggtgccccatatccctcgagctcatgcaggaccctgtcattgtgtccagcggccagacatatgagcgatcctgcatccaaaagtggcttgattctggccacaagacctgccctaagacgcagcagccactctcgcatacttctctcaccccaaactttgtcctcaaaagcctcatctcacaatggtgcgaagctaatggtattgagcttcccaagaacaaacagaattcccgtgataagaaggcggcaaaaagttccgactatgaccatgctggtctagtctcgctgatgaacaggctcaggagtgggaaccaagatgagcagcgggcagctgcaggtgagatacgactgcttgccaagagaaatgtcaacaaccggatatgcatcgctgaggcaggagccatccccttgctggtcaatctgctctcctcttcagatccacgaacacaggaacatgcagtgacagcactcctgaacctctccattcatgagaacaacaaggcaagcatcgtggactctcatgctatccctaagatagtggaagtgctgaaaactgggagcatggaaaccagagagaatgcagcagccacactattcagcttatcagttgttgatgagaacaaggtaactattggcgccgctggtgcaatccctccactcatcaaccttctgtgcgatgggagcccaagaggcaagaaagatgctgcgacggcaatttttaacctgtgcatatatcagggaaacaaggtccgggcagtgaaagctggaatcgtcatccatctgatgaacttcttggtggatcctacagggggaatgattgacgaggcacttagtcttctgtcaattcttgcaggcaacccagaaggcaagattgtaattgcgcggtcagaaccaattcctccacttgttgaggttatcaaaacagggtctcctcgcaatagggagaacgctgcagccattctatggttgctctgttctgctgatactgagcagacattggctgcaaaggcagctggagtggaggatgcactcaaggagctgtcagaaactggaacagatcgtgcaaagaggaaagcttctagcatcctcgaactcatgcaccaagcaaatgaggcatga</cdnaseq>

Protein Sequence

<aaseq>MPKRVADEIAALPEPRGPLRRPCADLSRRVRLLAPLLDHLPASS SSSSSTPLADALGAARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYN TFHMPQEVQEQVALVHSQFQRASTRTDPPDTQLSMDLAWALTDNPSDPALLTRISHKL QLHTMADMKNESIALHNMVISTAGEPDGCVDQMSSLLKKLKDCVVTEDHANDALTTRS ASIKHRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPL SHTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRS GNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNL SIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIP PLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEA LSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLA AKAAGVEDALKELSETGTDRAKRKASSILELMHQANEA</aaseq>

Gene Sequence

<dnaseqindica>108..329#425..541#628..1041#1131..2192#ggcttggcttgctgtccgcccgcgttcacaaggagaggagaggaggttgaggttgatcttgagtgtgaggagaggcgagatcggaaaaaggggaaatcggcgttgcgatgccgaagcgggtggccgacgagatcgcggcgctcccggagccgcgtgggcccctgcgccgcccctgcgccgacctctcccgccgcgtccgcctcctcgccccgctgctcgaccacctccccgcctcctcctcctcctcctcgagtactcccctcgccgacgccctcggggccgcgcgagacctcctccgcaagacccgcgacggcagtaagatcgaccaggtctcttgtcaattctcctcctgctcttcctgctgctgatttcaattctcaaccatcaatctatatactatatactatatgatggatggatgcaggccatgcgaggggatgcgttcctggacgaatttgcaggcgtcaacaggcagattcacctcgccttggatgccttgccctacaacaccttccacatgccccaagaggtccaagagcaggtactcactatattatgcagcccccaactccttcctggacttggacttggaatggaatgtttgaatgtatgttttctcctcatcaggtcgcgctcgtccactcccagttccaacgagcctccacaaggacggatcccccggatacacagctttccatggatcttgcttgggctcttaccgacaacccttccgaccccgcccttctcaccaggatctctcacaagctgcagctgcacaccatggctgacatgaagaacgagtccatcgcccttcataacatggtcatttccactgccggagaacctgatggctgtgtcgaccaaatgtcttccctgctcaagaagctcaaagactgcgtcgtcactgaagatcatgccaacgatgccctcaccactaggtctgcctccattaagcataggtctcctatcatcccagacgagtttaggtgccccatatccctcgagctcatgcaggaccctgtcattgtgtccagcggccaggtacatgtttcttgtagtatattctttccaccacatacattttttcagtccaaaaaatttaaaaagcaattgtgtcttctttttttcagacatatgagcgatcctgcatccaaaagtggcttgattctggccacaagacctgccctaagacgcagcagccactctcgcatacttctctcaccccaaactttgtcctcaaaagcctcatctcacaatggtgcgaagctaatggtattgagcttcccaagaacaaacagaattcccgtgataagaaggcggcaaaaagttccgactatgaccatgctggtctagtctcgctgatgaacaggctcaggagtgggaaccaagatgagcagcgggcagctgcaggtgagatacgactgcttgccaagagaaatgtcaacaaccggatatgcatcgctgaggcaggagccatccccttgctggtcaatctgctctcctcttcagatccacgaacacaggaacatgcagtgacagcactcctgaacctctccattcatgagaacaacaaggcaagcatcgtggactctcatgctatccctaagatagtggaagtgctgaaaactgggagcatggaaaccagagagaatgcagcagccacactattcagcttatcagttgttgatgagaacaaggtaactattggcgccgctggtgcaatccctccactcatcaaccttctgtgcgatgggagcccaagaggcaagaaagatgctgcgacggcaatttttaacctgtgcatatatcagggaaacaaggtccgggcagtgaaagctggaatcgtcatccatctgatgaacttcttggtggatcctacagggggaatgattgacgaggcacttagtcttctgtcaattcttgcaggcaacccagaaggcaagattgtaattgcgcggtcagaaccaattcctccacttgttgaggttatcaaaacagggtctcctcgcaatagggagaacgctgcagccattctatggttgctctgttctgctgatactgagcagacattggctgcaaaggcagctggagtggaggatgcactcaaggagctgtcagaaactggaacagatcgtgcaaagaggaaagcttctagcatcctcgaactcatgcaccaagcaaatgaggcatgaagcagacaacattcatttgtttaaatctgatttgtggtcgtcttatagctgtagcccattgtacacatagacatataaacactaaattgtttctcaattatgttgaagtttgatatatatatgtaggcagattttttaaaagggaatatgccgtaaacgtataaagtgttgtataatttatattgtaacttgctaccatgtacttgataaaactggtaaaaaaatccatgtgtttcagtttgctggct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0102700, RefSeq:Os06g0102700