Os06g0102800

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0102800| Description = Conserved hypothetical protein| Version = NM_001063071.1 GI:115465873 GeneID:4339840| Length = 9305 bp| Definition ...")
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Gene Name

Os06g0102800

Description

Conserved hypothetical protein

Version

NM_001063071.1 GI:115465873 GeneID:4339840

Length

9305 bp

Definition

Oryza sativa Japonica Group Os06g0102800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:194018..203322

Sequence Coding Region

194742..194917,195374..195465,195559..195572

Expression

GEO Profiles:Os06g0102800

Genome Context

<gbrowseImage1> name=NC_008399:194018..203322 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:194018..203322 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacaatgcttccacggtgcctatgcaagacagtggcactcttctggagcatgaagaagctgacacacaagagcaaggttaccagtctggcttgcacaaagttcctgaggtggtactggaggagactgatgtctccaagaacaaagctgatgaacatgcttccacttctgagccacttattcctgttgatctgtgttcaaacgataatgcttctgaaagcagccatgggatggaagtcaaagagcaaaccgtgggatgttcaaacccatgttttgtaa</cdnaseq>

Protein Sequence

<aaseq>MTTMLPRCLCKTVALFWSMKKLTHKSKVTSLACTKFLRWYWRRL MSPRTKLMNMLPLLSHLFLLICVQTIMLLKAAMGWKSKSKPWDVQTHVL</aaseq>

Gene Sequence

<dnaseqindica>725..900#1357..1448#1542..1555#gtctccccctccggctccgtccgaccaatccgccccgcataaacccccgcgactgccggcgccgcatcccctccgctccggccggcccgaccagagagcactgcccactggccactggagtggactcgcgggaacatctgggcgccgccactgatcgatctcctctccgtccgtcctctacctggtaagccctagtttgtttgtttgtttgtttgtgttttcaaccctggcctcaattgacattggcgtcggcaggggcagggcagctaggtgatcgatgccaaggaagaaggccagctcgccctcgccgacctccaccgccagggagactagaagctcctccgctcgtggtcatgcatcaccaaccccaaccccaaccctcaggaggtccacccgagaaaccacatccagattttcttcttcttcttcgtcttccgcaaacaagcacgaaggctcccccgccaagcaaagtgccaacaacaacaccgcaaaacggaagatgaataatgctgccgcagatacctccaccaggccaatcaagaagaacaaaaagctaaacgcaaagtcctatttagcactcttctccacaccccaacaaaccgccaaatcccctcctgcccctggtatgtatttcatctctttctcttctttatttatcgaggaggaaattcccggctgtattctaactttggcaatgtagcccctcctctcctagtccaagtggatgacgacaatgcttccacggtgcctatgcaagacagtggcactcttctggagcatgaagaagctgacacacaagagcaaggttaccagtctggcttgcacaaagttcctgaggtggtactggaggagactgatgtctccaagaacaaagctgatgaacatgcttccacttctgaggtctcatccttcctaggccttaaacccctgagtaacatcataactagatatctgcttatttcagtattacgtgttctgtttgtttatacctgcaaaatcttatacgacctctggagggagctactttggtttataataatatgaccaaacacagtatctgccagatgaggatacttactacacatgctcttttctgtttaccacctcagtccctttaattactatgtttcatggctcttagcagcaccctggttctttgaatattgtgttatgttagttccgtttgttttgagagatataagatttgcaactccattgtggtgcactctaggatttgccttatccgccattttgttggagtgacaaattcttgattgcccccatcctagtcattaatgatctttcaagttccatgtgtacaagggaattaaaagcgtaacatgtatttttctacagccacttattcctgttgatctgtgttcaaacgataatgcttctgaaagcagccatgggatggaagtcaaagagcaaaccgtgggatgttcaaagtaatccacttatcactgtgtgaatgctgattttcctatagagttgttaccacttaccatgatgacgctgagcatcaccctttcattttgcagcccatgttttgtaacagatttgccaaataggccttgctccattgttcatcatgaagaggtgatactaaaacaagtctttcagcatctttttctgtcactagcattgtatttcttctgtcttcgttttggtggaacaggaccaacatttttagttaatgttcttttgatgcttctctaggccaagaagacaattgaagcaggtgatcccagagagatcaaaggggcttctacttcaaatcaggctttagtaacccattctgatggaacagattacaacgagtacctgtgtgctgtttgcagaagtagggaaaccccaggaattctcaagtaagtcaatttacttcattcttgctgctccttgcggtgctgttcctttctgttacttctgcagatcctgtccattcttgctgtggatcctgtattggctttccacatgttaaactgttcatgccccagtgtagaaaatatgtggtgattgttactcccattgacagctggcattctgtacagtgagttaataccagtgacaaaacactctcaaactgccaaatgtatggagggcactgtgaccacctgcccttcgtgaggatggagggatttgggactatctgcgactgtggaggttgatccaggccatgtagcctccctcgttggttggttggtaggggctacttctgcctcttttgtaggtttaaaatgaggcagctcaggagatgccaccatgaaaggctgtgggagaggtcattcaagaagaatttgtatgacagaatggggcacaccggcagtgtgatgggatcatgggagtagtaggtggtagggtacgagaaggtggcagtggagcatgagaggagagagggtacgaagatagtccgttggacttgagtgaatagtgtgccctttatccttcatatcttcttctctttatttttttcacattcatgctgtggatataatagttggctttgttagattgtgttttcggcatatacttaatttgtaaggatctcaataattttaaatcatcgtttcttttttcaatctggtaacaggtcttgtgatggaaaagattgcaaaaatcggtaccatgattcttgtctggatcctcccctgcaatatgtgtcgctaggtatctggttgtgcaccttatgtactaaaaagaggctccagtttggtttatttgcagtcagtgagggcattgaatctttgtgggatgttaaggaaggtaagtactaaataaagcgacaaaacatatagatagatatcttgaagtgtaaccattcatttattagttctattactttgtcaccctaggagtgcagaacaacaagcagtattttgtgaagtacaaaaatttagctcatgtacataatcaatggcttccagaaagcgatataattcgcaccccaggaggtcaagatctaatcaacaaattttgtaagaggattcaaaaagaaaaggtggtctctgtgaattttttgttttgtcatattagaagagactattaggttctgcaagcctactgatgtttgtccttttcaaatgtggtttcttagacaataaggtggaagcaggaatgggctgagccacaccggctattgaagaaaagacctcttatgtctgaaaaggaagctgaagaattttttaattcacttggtgataaatttgcttactgtaatgtcgaatggttagtgaaatggaaagatctgggctatgagtatgcaacatgggagcttgagacttcatcatttttatgtacccctgaggctaaggatctgaaaaggaactatgagagccgccatgaagatgcaagaagaggttttgatcctgcaaaaataaataaggtatacctctgagaacagttatccacattaactgattcaccattgcttaattggataaggatcacacatatcacctgtacatgctgatctgctgcatgcatgcatttttgtggttgtccacctcataaaaataatgatgtttgtaaatttttaataaactattgacttcttttcatagtcatgtcttatcttcatgtcattttattgtacaaattcgaccagttatggccggttgattatcagaaattgaagctttataattggttctcaatcaactttgaatctataccaatgatcttctgtgctgtttgttaaccttgtctttctcctttcatgctacattttgcacttctaattcttcagtgatttaattcttattctacatgaaacagcaggtgtatttctgactgagttcttgttagattcttcgtgtcatttaccttatataaacccatagtctcctagaatcattttgaattgctaaaatttggtcggacaacttttttgtacttactccctccaaccaaaaatataaggcctagtagctttttacattgtctccaacattatactttgaccattaatttcttttataatatatcaacaactatgaaattaacattatgtgaaagcaatttcaaatgctattcgaatgatatcacattcaatatgcatgaaattaaacatgtgttttgttagttcaattattagtcaaaattttcagatgttgattttcctaaaaataaggatgccctatatttttggatggagggaataacattttgctcatgtaacttcactggtatcattcggttactggcattttcttagtttgtttcatgctttccaagttagttcattatgggcctgtttggcatagctccagctccaactccacctctcatggagttggagctcagccaaacagtttcagctccacctaaaatgggagtagagctgggtggagtctctcacaaaatgaactagagaggtggagctgggtttaggcagctccacaactccactccagacccaactcctagagctaaatttaggaattggagctctaccaaacaggccctatgtttaaatccatatattcattaggactgtttgaaatgtgggaacccgcagggagatacactctttcctatatgactatatttgaaacatgtcttagactggtatatctttctatgattatgcaggtttctctttaaataactcaatgggggtgttttttcttaaatattaacagtttatagtgtctttggtgtttacagggtaagcaatgtctgtttcagaaacttcagaagctaccggatgggttcccccctggtttagacaaagatcatttgagttcacttaaccggctccgcgagttctggcacaattctgatggtgctatttgtctcgatgatcaggtagtactctctgaatgttttagctgctatgcacaagaactgatatagcgtttactccaacttgggttggcttccttttttttcacccacccacttttgtcagttcttacttcttagttataagtatatagtggactgcatggctaaatgctgtagtgcccttgacattttattgtggattctttccagttatgttccacatctgaaggtttaactatgtaacttatctattgactttatacaggagagagtaatcaaaaccattcttttttctatgtccatattgcctgatgtctgccaaccacttctcattgtctctacttctgcttctctctcattgtgggaagctaagttcaatcgcttggcaccatcgatcaatgttgttgtgtataatggggagaaagacgtacgcaaacagattcaagatttggagttttatgagaacggtttggtgacgtttcaagttctcttgtcccatcctgatgccatcctagaggtacttgtttctcatttccatcagcatcaaaacacatcaatgactactcttgttctcatttccatcagcattatccaatcatgaaagtcagctatcaagattactcacatcctatttctttccttttttccactgtaatacaggacattcagaccatggaatcaattgtttgggaggcagttatggttgacgattgtcaaagcttgagagtttcaaaatgccttgaacaacttaagcatctttctaccaattttaggatggttcttttgagtttcccactcaaggtgctgttagcaaccgtaacctgtagaattattttcactctttttccacaaacaggcaatgttaattccttttgttttgcaggagagtattcctgagtacatcaacctgctgtctttcctcaaccctgaaggaagtgtcatttcgagtagttcaaatggtgattttactgatacaggtgatatcttagcaacgctgaaagaaaaatttgctcgtcatgttgcatttgagcggaaagcagattcttcaaaatttttggagtactgggttcctgctcgtctttcacgagtgcagctagaaatgtactgttataccttactttcaaactccccagcactccgatcacactcaagaactgatagtgttggtgctcttcgtgacattcttgtatccctccggaaggtttgctcttcaattttctgagcacaatatattgttttaattcatggcagggaattagatagtctagatgatggaatctgtatgcaacagtttcttctgacatagctgctgacacaatatatccttgtttcttctggcacagtgctgtgaccacccttacctggttgatcaatcactgcaaagctcacttactaagggccattctctgactgatattctagatattggagtgtgtgcaagtggcaagctactgctgcttgataaaatgctccaagagatcagaaaccaaggccggagagttctcattgtttcccaggcaagatactagataacattcatccataatgtttttacatgctatacttaaatccaaagttgtgaagagtgattgcttagtacataagtccaaagtttactttcctcaaacatatttgggtgttttcttatcatttccaaagatagtcattgctatgcgcaattattatcatctgagaaaaatattgtgagctgtctttaatatgcacgttttagtgtcagggcttaaccactcaaattagggcagtatctgacttgcctcaaatgcaacatcaagggctgcataaaaaccttacacgatttaatacagtcatgcagaacatgtagggctggtgtctctctctataaaaattcttagggctgtagctggggtagaatgcagttgtttgcttgagccctcctgttcatattttatactagaaacaaaggctcaaaccatgttattctagcttgcacactccatattctgcaggaatccaggtgttggagctgcaccatatgaaccctaccaaaaagaattaaataagttactgaaatgtacaaagtacaaactcttttaggagtatatacttctttatttctaattgaactcattatttcgatatgctttggttcatcacttatagaacttaagtgtttggcattcttatatttttcttccaaagtatgtcagtccaatctggttctcctttttcttatatggcagtctggtggcggggctggcaaccctatgggtgacattttggatgattttgtccgtcagagatttggttttgagtcatatgagcgtgtagaacgcggattgctagtgccgaagaaacaaacagcactgaatatgttcaatgacaaaactaaggggcgttttattttcttgattgatagtcgtgcttgtgttccaagcattaaattatcatctgtcgatgccatcatcatatattgtagtgattggaatccaaccaatgacttgagagttctccagaggatcagtatagagtctcaatctgaatgtgtgcctatttttcgcttgtattcgtcttgtacggtggaggaaaagactcttatactagcgaagcatgatcatattcttgacagcaacgtccagaatgtaatgcctatcgtgagccattccctgcttagttggggtgcatcgtttctcttcaatagacttgaggagttccaaaagcatgactactccagtaaagattctgaggatgatggtctcttcatgaataatgtatttttggagtttgcagcgaaactatccaccaacgttgaagccagcactaaaatggaaaatgcagtcatatctcgagctcagcagagtggatcgttttattctagagatattgctgttataagcgagagggagggaatatctgcagttgatggtgatttgccaaagttctggaccttctggtcaaatttactaggtgggaggtctcctcattggcaatatatatctgagccagtgcaaaggaaccgtaggaagatacaaaatatggaagaccaaatgagaatacctgcagaagaaactgatgaagcaataatgaaacgtagaaaaatcggagaaatcatggattcatctccgaagatcctacctgtcaaagacaatgatgctgtgctgcctgaaaatagtacagcatccagttctcatgaaacatcagttgatgacacttggcaagagctaggtattccaactgtaacagtaattaacagctcttatgctttatgtgcatatgctacatttttttataatacactccattttgtaggggcagaaagccttcagggcacacagaaaggtcttcacacccaactcaagccagagctgtcaaagttgtatgaattgttggaattgccggtactgccaagtatattaaaataaatgcttgctttatgttattaatttgagaaaaatattttagttcactgcaagtacaggacataatctgctcttttagcattcaatttaatagctaatattttttagttttcaacagcagagttccacaccttgtgaagagttatttatcaagttggatcttgataacttttgctcttcataacggaaacattttctttgactcttagtgtgtcattttgatccatatatgttacttcctccgtttcacaatgtaagactttctagcattgcccacattcatttagatgttaatgaatccagacatatgtatgtgtttagattcattaacatatatatgtatgtgggcaatactagaaagtcttacattgtgaaatggagggagtattagttgctactatatcctgcttttagctcaggttatgagctttgatatcacctactccctccgccccatagaaaaccaacctagtactggatgcctgtctagattcgtagtactaggatgtgtcacatccggtactaggttggttttctatgggacggagggagtgcatgtttctacatgcttccaatatgaatttatgcaggacagctgtgtcctgcagtcctgctgttaaaaagttgcctcctcttctgtagaatttatgcagcatgctgttaccctaagtttcagtttaagcgaacttttcctgaagtcacttgattctctagttaaataatataagctgattggatgcttggatgcttgataaaaccttttgcaggagactgtcaaatgtttatgtgaggaattacttgattacattttgaagaatcatcaagtcagtcaggagccaaagggcatattgcatgcattcaacattgccctggttagattataaaaatattttataggttttttagctaaatttgcatggctaaatgctattattttttccatgtgcttttcagtgttggcgtgctgcttctctcttaaagcataagatcaatcgaagagagtcacttgccctttctgtgagaaacttgaactatgagtgcgatgaagtgctcgctgaatatgtttatgagaagctaaggatcctcaagaaaaagttttcgcgtagagcaagtgaaacaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0102800, RefSeq:Os06g0102800