Os06g0103800

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0103800| Description = Protein of unknown function DUF125, transmembrane family protein| Version = NM_001063080.1 GI:115465891 GeneID:433984...")
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Gene Name

Os06g0103800

Description

Protein of unknown function DUF125, transmembrane family protein

Version

NM_001063080.1 GI:115465891 GeneID:4339849

Length

5308 bp

Definition

Oryza sativa Japonica Group Os06g0103800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:265683..270990

Sequence Coding Region

265752..265968,267786..268460,268909..269073,269163..269438,269547..269663
,269776..269853,269930..270184,270262..270323,270403..270816

Expression

GEO Profiles:Os06g0103800

Genome Context

<gbrowseImage1> name=NC_008399:265683..270990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:265683..270990 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggaggtggagaagccatgggagttgaaggaggatgtggagatcatgacggaggaggaggaagaagacgacagcagcaacctgctgcaggccaggggcaggaacaagaagcacgcgctcatcaatggagatgaacaacaacaacaacaagaagaagaagaagaagaagaggttgttgaggagcacaagagcgtcttctttgatccaacccaagtttctgagcatgttactgaagtaagtggtaagaatgaagttacaagagtggagcagttcgttgctaaaaaggaaaaggcgcatgaaacatcaagttcaaagggaaaagaacttgagacacaggaaaatgctaattctcaagaaactaatgaaaattctaataacagcagtttggagaacagatcaccttcaaatggttcacatgaagtctgtaacagtggtgaaacagttacagttgcaaatggaaaagcaggcttgaaagtgatcacaatcattgacaagaaccaaaacggcctggcaaactcaaatggttctcttcacattgccaatgtcagcatgaacaaaactagtgtccatgaaattgaagctgagaaggatgaagatgtcattaagggcaaagtgaacattgaagagtatgaccttgagaaaattcttgatgagcaagaaactcatgacctgttctgtcccaattgcaactcatgcataactcaaagggtgattctgcggaagagaaaaaggacagtaagacaaacatcacctgatgaaccaccaaagaaaacacagattgcagagccttctgctaatacttcaaatcagactgtacctgaaagacaagggcaagagtcacctgacatattcagatgtttatcatgcttcgccttcttcattccaacaggttgtggctttaacatattccgtatatttggaaggacggaagtgaaccaagaagctcaggtacaggaagctgctgcatcaggtcagatgtctggctccgacaattgtgcaagttggcttttttcttgtttcgagcctggagacggtccaaagaaaactgatgcaggtccagaaaaggagccactattacctgacaagcaggactccaataatggttcagcttcatcagttgaaggtagcacagcatccgttcatagtcatggcataagtgtacaacaacaagaatcaaagagaccattgccagctgagtcatcttcccaacttcaacccagcaatacaaagaaagaagacttcggaacagtatcgttcagtggatcatcatcggtagaagctccttcatcgtcatctgctagcattatcaaccctggacagaccgcgacaggattccttcagactggggaaacacatgtggtgattgggcagcaggacatcgtactgcaacagaacgttcctcttccaaagcctggagatgcagctcacctagataaacagaaacaagaaactccaccagcaagccacacatttcctacaccgggagtcaagatcccagatgcaaatccagctaaatttataccagatgtggtgaggccaatggtagataaaccaagtcgaggcattgtgattcctcctgaagcagttgagtcacaaactcgacctgagcattcatcagtgcaaatagggcctgatgcgagcatgccattgattgatactcctgcaccagagcaaagggatgattgggacatcctgaaagctatcgtatacggtggcctcgtggaatcgatcaccagcctctctgtggtttcagcagctgcatccagcggcgccaggacattggacatattcatcttgggcatagcaaacctcatcggtggacttcccatcatctttcacagcatggctgagctgagaagcattggagatgtggatgagagggaggagcagggcggtcactactggttgcagctggggaggcgatccaagtaccggctgcatgtcgccatggccgtgctgtcctacctcctcttcggcctgctgccgccgctcatctacggcctctccttccgcggcggcgacgtgagggagaagaagatggtggcggtggcggcggcgtcgctggggtgcatcgcgctgctggccatgggcaaggcacacgtggcacggaggcggagctacgtgaagagcctcctctactacctgagcattggcgtgagcgcgtcgggcctctcgtacgtcgccggcctcctcgcccactttgccctcatcacccaccaaacccctcctgcttcatcctcctgggcttcatactga</cdnaseq>

Protein Sequence

<aaseq>MMEVEKPWELKEDVEIMTEEEEEDDSSNLLQARGRNKKHALING DEQQQQQEEEEEEEVVEEHKSVFFDPTQVSEHVTEVSGKNEVTRVEQFVAKKEKAHET SSSKGKELETQENANSQETNENSNNSSLENRSPSNGSHEVCNSGETVTVANGKAGLKV ITIIDKNQNGLANSNGSLHIANVSMNKTSVHEIEAEKDEDVIKGKVNIEEYDLEKILD EQETHDLFCPNCNSCITQRVILRKRKRTVRQTSPDEPPKKTQIAEPSANTSNQTVPER QGQESPDIFRCLSCFAFFIPTGCGFNIFRIFGRTEVNQEAQVQEAAASGQMSGSDNCA SWLFSCFEPGDGPKKTDAGPEKEPLLPDKQDSNNGSASSVEGSTASVHSHGISVQQQE SKRPLPAESSSQLQPSNTKKEDFGTVSFSGSSSVEAPSSSSASIINPGQTATGFLQTG ETHVVIGQQDIVLQQNVPLPKPGDAAHLDKQKQETPPASHTFPTPGVKIPDANPAKFI PDVVRPMVDKPSRGIVIPPEAVESQTRPEHSSVQIGPDASMPLIDTPAPEQRDDWDIL KAIVYGGLVESITSLSVVSAAASSGARTLDIFILGIANLIGGLPIIFHSMAELRSIGD VDEREEQGGHYWLQLGRRSKYRLHVAMAVLSYLLFGLLPPLIYGLSFRGGDVREKKMV AVAAASLGCIALLAMGKAHVARRRSYVKSLLYYLSIGVSASGLSYVAGLLAHFALITH QTPPASSSWASY</aaseq>

Gene Sequence

<dnaseqindica>70..286#2104..2778#3227..3391#3481..3756#3865..3981#4094..4171#4248..4502#4580..4641#4721..5134#gggcgtagagccagctatctatcagccaccgcacaacccacaactggccttcagaaagggaggaagaagatgatggaggtggagaagccatgggagttgaaggaggatgtggagatcatgacggaggaggaggaagaagacgacagcagcaacctgctgcaggccaggggcaggaacaagaagcacgcgctcatcaatggagatgaacaacaacaacaacaagaagaagaagaagaagaagaggttgttgaggagcacaagagcgtcttctttgatccaacccaaggtaagagataatcttcatttctcactcctctgctcaactgctttcttctgtcttttatttatgtgaagaacaactcactactaatagtagtgatgcaaccacaattagtaccaatcaatttccttttacttcttaattaattccttgatactactgtttctttggggagggaagtaagctaagccaactcctgttgcattgtagctgtgcgccttgttgcaaattctattaccttcaacactgattttatctcctgcctacctttcttctccatttctttcattctctctctctctctcttgttatttttgttaagcacaaaagaaacagactttttgaaaaggaaaaggagaagaaaacaaatgggctaacatgggggacgcatataagttatggttaggacagagatagacagataccaccaacagctacagccctgcagatacttcgttttgcaggtccctttccctcatccaatcatcttttcttcgcccacaaatttcagcgaacatcatgtgccctacgtggctgatgattgtgcagctccttcacttgttagacttttttcgtgttaggcaaaaattctgtctagtacctgtcatgtcacttttggaagtacctttaagaaaaaggatgtcttttatggtgaatttgatgttcttgtttagcatcttccattccatcttctagaagctcccatcattaatttgatatttgggggaggagattcaatattgtaagcttgttataaatagatgggtttatacttttgaagaaattaacccatcagcttgtacaggcttacaattaagatttttaggctggccttcaaagacatggcatcggatctttgtaatttatatagttgatttctgtactgcaacattatttatgtctattgattgactaaaccaaataccaattgtcaaggaaaatcatggctaattaatacttgtcaatatatgcagttggcaacagaagtagtctaaggattaatatctttgctctttttatatttatggatatagatgccgaatttctatccattatctaaaaaaaagcaagcctattcaagcttccaacataaattcactgatagattggaaactttagataaaagaacacataaaaaatcctacttacaaaatcacatggtaattttctctttcttccaaggctacacttcatcttctgttggaatgttaaatgtgtatccaatggaacatgatttgcttgtgcaagtgaatccatagataaatactactggtagcaacacaagatacaaactttaggacatctttttccccctctttaaacatttaaagatagtcatttatttctttgctgaagggttatggaagtgccgtcactgcgattggacatacctcttgagtggtccatccagaaatgttatcctgaatcatcaagggtattgccaaatcacgacgaatcttgaatcgttagttcagagtgaatcattttacagttcaccaagcaaaggttagtgttgagtattcagaagcgtaggataataatggttagatttctaaagctttctttaaaactgaataaaatagtgatggcaaaactaggtcactaatcatgcttgctaagggaggcttcagttttggttgtaccggcattgagctagttctgcttcagtttattcaacaaacctgagagtctagcttgatctgtttaagctcttgtaatcattctttgaagctttttatgcacaaaatgagcatgtcactgatgatggaaaagctggtaaagtttgaagtatttaataatattgcctttttctctattttcagtttctgagcatgttactgaagtaagtggtaagaatgaagttacaagagtggagcagttcgttgctaaaaaggaaaaggcgcatgaaacatcaagttcaaagggaaaagaacttgagacacaggaaaatgctaattctcaagaaactaatgaaaattctaataacagcagtttggagaacagatcaccttcaaatggttcacatgaagtctgtaacagtggtgaaacagttacagttgcaaatggaaaagcaggcttgaaagtgatcacaatcattgacaagaaccaaaacggcctggcaaactcaaatggttctcttcacattgccaatgtcagcatgaacaaaactagtgtccatgaaattgaagctgagaaggatgaagatgtcattaagggcaaagtgaacattgaagagtatgaccttgagaaaattcttgatgagcaagaaactcatgacctgttctgtcccaattgcaactcatgcataactcaaagggtgattctgcggaagagaaaaaggacagtaagacaaacatcacctgatgaaccaccaaagaaaacacagattgcagagccttctgctaatacttcaaatcagactgtacctgaaagacaagggcaagagtcacctgacatattcagatgtttatcatgcttcgccttcttcattccaacaggtatcatttggggaagcgcttgtaaattgtaatcacgcattcatcacctgaagcttagcatatttgctaaatgaaatagaaatgttatttagcgtattcactaaaaaaaatagtagaaatgttacttagaatcattatacttgtgtatacagtttcagatccaccatacctgcactatttatgcacaaagagccaaaactgaaagtctcacatgattcatttcattcatgattcagacattgagttggaggcaggaatctgcctttttcgacgatgcattcctagttcagttttaggataatgtcttggtttgtacaggtgttttttgccgggccggccaagataggccaaccaaatttactaagattgatgaatatgtactggtttgtacaggtgttacctgactatttcatttcaaagaccagcttaacctgtttgttatcaccaggttgtggctttaacatattccgtatatttggaaggacggaagtgaaccaagaagctcaggtacaggaagctgctgcatcaggtcagatgtctggctccgacaattgtgcaagttggcttttttcttgtttcgagcctggagacggtccaaagaaaactgatgcaggtatgtaatctgcaaggcatgctgtacttactagaaggcagttactctacatttcttgaatttctctgaacaatttgtacacattgcaggtccagaaaaggagccactattacctgacaagcaggactccaataatggttcagcttcatcagttgaaggtagcacagcatccgttcatagtcatggcataagtgtacaacaacaagaatcaaagagaccattgccagctgagtcatcttcccaacttcaacccagcaatacaaagaaagaagacttcggaacagtatcgttcagtggatcatcatcggtagaagctccttcatcgtcatctgctagcattatcaaccctggacagaccgcgacaggtttgtttataataagaccctcaatgaactcgtgaatatgcaataatttgtgataattggtaaccaactggcaatgactgcacctaaaagttgaagccccttatccaggattccttcagactggggaaacacatgtggtgattgggcagcaggacatcgtactgcaacagaacgttcctcttccaaagcctggagatgcagctcacctagataaacagaaacaaggtaggcctgatcaggattcgtgaaccatattgtttcttatttctagtagaagatgaatcatgccgatgatagtctctcattttttttatctggtctcttgcaaattttgaagaaactccaccagcaagccacacatttcctacaccgggagtcaagatcccagatgcaaatccagctaaatttataccaggtgtggtgtggttacaccattattgaggagccagctttacatatattgattgtcgcattgcatatatgacttgcagatgtggtgaggccaatggtagataaaccaagtcgaggcattgtgattcctcctgaagcagttgagtcacaaactcgacctgagcattcatcagtgcaaatagggcctgatgcgagcatgccattgattgatactcctgcaccagagcaaagggatgattgggacatcctgaaagctatcgtatacggtggcctcgtggaatcgatcaccagcctctctgtggtttcagcagctgcatccagcggcgccaggacatgtaaagcttcctctctgttgttgattctggttccttccttcctgcatcagccatcacatatgttggtcgatttgcagtggacatattcatcttgggcatagcaaacctcatcggtggacttcccatcatctttcacagcgtaaaaactcaaaatcatatcttgactactagattctcttgaattgaataaatttctaatttatggggtttgaatttagatggctgagctgagaagcattggagatgtggatgagagggaggagcagggcggtcactactggttgcagctggggaggcgatccaagtaccggctgcatgtcgccatggccgtgctgtcctacctcctcttcggcctgctgccgccgctcatctacggcctctccttccgcggcggcgacgtgagggagaagaagatggtggcggtggcggcggcgtcgctggggtgcatcgcgctgctggccatgggcaaggcacacgtggcacggaggcggagctacgtgaagagcctcctctactacctgagcattggcgtgagcgcgtcgggcctctcgtacgtcgccggcctcctcgcccactttgccctcatcacccaccaaacccctcctgcttcatcctcctgggcttcatactgaatttcttcttcttgtttggttcgacaaaagttttgatgccttcccatttacagcaagcccttcgcaagatcatagtgtaaaagctctttttcgttgtaccatagcaccctttttttttgtcaataaactttggcaaggaaaataacaaggtcaggcttgccctgttctttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0103800, RefSeq:Os06g0103800