Os06g0104000

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0104000| Description = Conserved hypothetical protein| Version = NM_001063082.1 GI:115465895 GeneID:4339851| Length = 5437 bp| Definition ...")
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Gene Name

Os06g0104000

Description

Conserved hypothetical protein

Version

NM_001063082.1 GI:115465895 GeneID:4339851

Length

5437 bp

Definition

Oryza sativa Japonica Group Os06g0104000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:275729..281165

Sequence Coding Region

276108..276112,276319..276484,276563..276628,276717..276770,276868..276957
,277302..277398,277496..277575,277709..277753,278006..278134
,278593..278722,278888..279222,279918..280053,280149..280328
,280422..280679,280752..281137

Expression

GEO Profiles:Os06g0104000

Genome Context

<gbrowseImage1> name=NC_008399:275729..281165 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:275729..281165 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccctccttctactgcgtgccggcgccggcgccaagccaccactctccttctccgtgcctccgcctcctggggatgtccgaataagcagcagaccacccaccacggccacgcgctgctcctcttcctcttccccaaagctctcctccgccaccgtccaattccgctccgactccgacccatggaaccaacccactgttgatgacgacggcgacttcgacttgaaggggaggaaggccatccccggcatccacgtcccgcgccaacgctacatcgccgtctccaagcccgccctcctcgacgctctcctctccctcttcccatcccaacctcccactccctctcccacctctgctgcggctgctgacttcaagcgctttgcaagatgcctggacgccctcctccacgcagagcacaaggagatgctcgaggaaatgcgaacctattacatgctcacccacaaccatcaccaacacaccgctgccgctgatgacgatgacgatgaccaatccgtgctcaacggcaacgccaacaccactgctggtttttttggcattacagacaacggaaccttgcttcttaccagaagcttgggtctcagaacactcctgggattgtcaccagaccctgattcacacaacagaattgcttttgcaactcatttccagcgctccttcatgaaccttctgcgcaatgctcaatttgaagagctctctgcgcaagacctgctcttgacatacgccctaaacaccgattacctcttgactttgcccatttatgtcgattggaaaaaggcagctgagtccaatgctatcatattcaggcgtgggtatgcaacggagaggcagaagggcctactgttggttgaaaagcttgattacctacagtctaaactcttgcaaaatatcttctttggcttctccaagcccttgaggaagctggggaaatggctcaatgaggcattgaaaagatcaacagggaatgagggatttcagatctggattgaaaaacttaaagtctggcttaaagagcaaacctatgcggagaattcgctttcgttgattgagaactcttcatgggataaacttagatctgatcaattaccggatgctgatcttcctatttggattgctgctcaaagggcagtctctcgttacgaaggaatcctgtcaccagttggtcctcgtggcagacttctaagaagattgcttgcttggactggtttaatcccttctctgccagaagcaacaataaagtcagatatcgatacaaaagatcttgaaggctatgtgaggccaaattttctgccaagaataacacttgcaaatatatgggcgccagcaagcagagaatcttgtaacaacaatctctgggagataacaaaagcttcttttggtgttttatttgggaagtctactcttcaggaaccagcattccaagaactgatcctactttatactgatgaggctgatcaaagcaaagagagagaaaaatcagacatgatgccattgcaactgaaaatttttgaaaggatccccatccctgatctgccagtggtttttcctcacaagaagttgtccttccgcatcctagatacagtaaggttggatattgctaccgtaataggtttgttggcttatgtcgtgaactacaaatttgagagtttagcctcatctccatcggcttttcttcttgatatagttgcctttactgcactagcaatacttgtgttccgtgtggcgctgggttacaaacaaactagggatagataccagcttctggtcaataaaacgctctatgagaagacattagcaagtggatttggttcagtttattttctccttgacgcttctgagcaacaacagtataaagaagcgcttttggcatatggtatgttactgtgcaggaaaaagtatcaggtgtcatctcgtgtaagcatcagagatacatgtgagcagtttatgtacgagaaatttaaggcgaagatcgaaatgcctattgacaaagctatggagacactattgcgtctggggctggtgattgagctgccaactgacggcggctcccgtgtaatcgcacttccatgttcagacgcatacgagatcctgaaaagccgctgggacagcttgttggaacacaagacggaacaaggctga</cdnaseq>

Protein Sequence

<aaseq>MPLLLLRAGAGAKPPLSFSVPPPPGDVRISSRPPTTATRCSSSS SPKLSSATVQFRSDSDPWNQPTVDDDGDFDLKGRKAIPGIHVPRQRYIAVSKPALLDA LLSLFPSQPPTPSPTSAAAADFKRFARCLDALLHAEHKEMLEEMRTYYMLTHNHHQHT AAADDDDDDQSVLNGNANTTAGFFGITDNGTLLLTRSLGLRTLLGLSPDPDSHNRIAF ATHFQRSFMNLLRNAQFEELSAQDLLLTYALNTDYLLTLPIYVDWKKAAESNAIIFRR GYATERQKGLLLVEKLDYLQSKLLQNIFFGFSKPLRKLGKWLNEALKRSTGNEGFQIW IEKLKVWLKEQTYAENSLSLIENSSWDKLRSDQLPDADLPIWIAAQRAVSRYEGILSP VGPRGRLLRRLLAWTGLIPSLPEATIKSDIDTKDLEGYVRPNFLPRITLANIWAPASR ESCNNNLWEITKASFGVLFGKSTLQEPAFQELILLYTDEADQSKEREKSDMMPLQLKI FERIPIPDLPVVFPHKKLSFRILDTVRLDIATVIGLLAYVVNYKFESLASSPSAFLLD IVAFTALAILVFRVALGYKQTRDRYQLLVNKTLYEKTLASGFGSVYFLLDASEQQQYK EALLAYGMLLCRKKYQVSSRVSIRDTCEQFMYEKFKAKIEMPIDKAMETLLRLGLVIE LPTDGGSRVIALPCSDAYEILKSRWDSLLEHKTEQG</aaseq>

Gene Sequence

<dnaseqindica>5054..5058#4682..4847#4538..4603#4396..4449#4209..4298#3768..3864#3591..3670#3413..3457#3032..3160#2444..2573#1944..2278#1113..1248#838..1017#487..744#29..414#gtgctgtgcgtcgtcgtcggcgccggcgatgcccctccttctactgcgtgccggcgccggcgccaagccaccactctccttctccgtgcctccgcctcctggggatgtccgaataagcagcagaccacccaccacggccacgcgctgctcctcttcctcttccccaaagctctcctccgccaccgtccaattccgctccgactccgacccatggaaccaacccactgttgatgacgacggcgacttcgacttgaaggggaggaaggccatccccggcatccacgtcccgcgccaacgctacatcgccgtctccaagcccgccctcctcgacgctctcctctccctcttcccatcccaacctcccactccctctcccacctctgctgcggctgctgacttcaagcgctttgcaaggttcgttgctcatcttctccgctcctcacttcaagtccaattcaattcaattcaatgatacatgcatggcagatgcctggacgccctcctccacgcagagcacaaggagatgctcgaggaaatgcgaacctattacatgctcacccacaaccatcaccaacacaccgctgccgctgatgacgatgacgatgaccaatccgtgctcaacggcaacgccaacaccactgctggtttttttggcattacagacaacggaaccttgcttcttaccagaagcttgggtctcagaacactcctgggattgtcaccagaccctgattcacacaacaggtaacaattaatcggatcctcttcacttccacttactagtactatatactgtgcctatgctgataactcaactcaacacgcacttgtttccagaattgcttttgcaactcatttccagcgctccttcatgaaccttctgcgcaatgctcaatttgaagagctctctgcgcaagacctgctcttgacatacgccctaaacaccgattacctcttgactttgcccatttatgtcgattggaaaaaggcagctgagtccaatgctatcatattcaggtaacccctcttgtttcctttttgcaacctgatagcctatctacacatgtaactcaccatggtacgaatgaatatataaccctttttcttcacaggcgtgggtatgcaacggagaggcagaagggcctactgttggttgaaaagcttgattacctacagtctaaactcttgcaaaatatcttctttggcttctccaagcccttgaggaagctggggaaatggctcaatgaggtcagttaatctttccatcctaatgtgttatgctaatttcttgctcatcatataaaagaaattatttcttatactgcgctgtcctggtagtgttaacaattcaacctgccccagtttccactcacgaccagtactgtagtaaccaatgaatggtttggaccaacagatagtagcatcaatcttagatcgtgcacaaatgaagttagaattcaacctagtcttttcataacctgagacatatactcgcaaatggttctaactgttttattcttgggatctgtgttcctaaatacagaggcaaagttattatgcagaagacatcattatctttagttgttacgtgaacagtctgaaacatacatcagtgtacatcactgtagcccctgtactattttagataattgtaaaataattatgaaagaaaagataattccaaaattagctggccaggctattaacaaaattcaagttaggatcgcatataaattaatttttaagacaatttgactattgcagttctcaacttctcatcctgtctatgtgtaggcattgtgttataaattggcactcatgttgtactccttttttcaactcttttaagtatggttgattgctagacccattactactagtttgatgttgcgtgcatgtaacaatttttagctaattgtatgtgattatttagttcatggcaggcattgaaaagatcaacagggaatgagggatttcagatctggattgaaaaacttaaagtctggcttaaagagcaaacctatgcggagaattcgctttcgttgattgagaactcttcatgggataaacttagatctgatcaattaccggatgctgatcttcctatttggattgctgctcaaagggcagtctctcgttacgaaggaatcctgtcaccagttggtcctcgtggcagacttctaagaagattgcttgcttggactggtttaatcccttctctgccagaagcaacaataaagtcagatatcgatacaaaagatcttgaaggctatgtgaggttagacccttgtttaaccttattggatttattagcaagccatcaataagcaccattgttcaactttgtttcttggttctttcttttgggaaaataactattgagatatgtttaacattagtaagtgatgctctttagatttactgaataaggcgctggttgtaggccaaattttctgccaagaataacacttgcaaatatatgggcgccagcaagcagagaatcttgtaacaacaatctctgggagataacaaaagcttcttttggtgttttatttgggaagtctactcttcaggtatctacaatgtttgagttgtagaaacatgtttcttactaatagctaattaattttggtgcctacatatatttataaaatattcattatgttaaatgataaaaatgtttagactgttgggatattgactgaatgattgattgaccatgtactcgaacccaacatcaaaatcacaaaaccaagcaggtgtactgctatacaacatatatggacttgtgttacaccttgggtaatgaattgaaagtaaaggaagcaattcaaatgtgtatagaatacacagcctttggactaaacattggtatcactattatggtgagaaaattgacaatattgaaatggtttctgttattatcctttacaattctatattatataggatgccagaaaagtacaaatatttttctttaaagaagctagcttgcaaaggaaatgctaaattctggcttgttcttcgtcaggaaccagcattccaagaactgatcctactttatactgatgaggctgatcaaagcaaagagagagaaaaatcagacatgatgccattgcaactgaaaatttttgaaaggatccccatccctgatctgccagtaagtgtgctgagtatcttacacctattgaaaaagtatagtgtctcacattttgtttgtgctattcagattactatcatctactattttttccgcctggcactatcatcttaccatttacaagccttgattatctatgatgtctactaaaatggaaaaaaatgattaaataaactccaacgcagatctatcatcctacaaaatcgagcatatcgaaaccataatgactactaggctaaacttttgttgcaggtggtttttcctcacaagaagttgtccttccgcatcctagatacagtaattcttgtcattttatccctccccatgaaaacagatcttaccatttcgtctgtttatacagctattccgtttgctattcttattcccccgttttctgcacctatagttatgtttttcttccctaacacaggtaaggttggatattgctaccgtaataggtttgttggcttatgtcgtgaactacaaatttgagagtttagcctcatctccgtaagtatgtaaatttatacatcagtagatttgaggggactactttttattctaacaaaacatatgatattgttttctttctccaatggtgatgcagatcggcttttcttcttgatatagttgcctttactgcactagcaatacttgtgttccgtgtggcgctgggttacaaacaaactagggatagataccaggtaaatcattactttttcatatgtttacatgattacttaaaattcgtcgatatatttttttttccgctagacaaattcattaagattttgagaaatttagtgcaattttacaacaaacatggttgtttgtgatggtacttagctttggtggcctcctaacaggcaccagagaggaattcatcgatatattagcatatgcatgcataacaaattgtgaaaattgtacgatatagtagttcacatagtgtgatggatatatttggtattaactccttacctgaaaaaaaaaataagtgtgtactgccgtaaggttttgaagtcagttgaatatttttcttgtccagcttctggtcaataaaacgctctatgagaagacattagcaagtggatttggttcagtttattttctccttgacgcttctgagcaacaacaggtgagattcagttaacagagaaaaacatggggtttttttttgtgcatatgatcagctttttcagaaagggttctcccttaatgagtgttttgttcagtataaagaagcgcttttggcatatggtatgttactgtgcaggaaaaagtatcaggtatggcatgtttgctttcaatacagtataggaggctaggacctacatgacatgtcactaatcgcttttcctagctaaccccatgcaggtgtcatctcgtgtaagcatcagagatacatgtgagcagtttatgtacgagaaatttaaggcgaaggtatggatgagcatctagaattgtttggttggttatcatgaaaattgtgaagtgagtcattctctgttatccctgtagatcgaaatgcctattgacaaagctatggagacactattgcgtctggggctggtgattgagctgccaactgacggcggctcccgtgtaatcgcacttccatgttcagacgcatacgagatcctgaaaagccgctgggacagcttgttggaacacaagacggaacaaggtaaggcatatatatgttgatcatctgtgtggtacttgagcagatattgttatatctcgatattgttacgagggagtatgtgcgcctgtgttcaacattcgatcaattattgtaaagcacacgagttaagaattttagtcatttcattttacctaatatggtggtaagttgtcttgcctaaacttttgttttgtggtgtttttcaggctgatgaagaagactgtattattgagatggacggacgttgtctgtattcatctgtgagaactgttcagtggagaagttgaaggaagaggttccacagccttgaggttttgtatatgcatacaagactcttgtagcagcaaattagtagtacgtaggtgttgaagaagaagaatatatgaaatgaaatgaaatgaaaatgtgagatgttgcccatgaaatggatgatttgaatcagcaggatgtgtgaagaacgggccaaatgtatataccatacggccattggcatctagccaagctagtgatttgagatgagaatgagatggtggtgcacttgtgtaaatgatatattttgctactacatttattatagcgaaaataatggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0104000, RefSeq:Os06g0104000