BGIOSGA022945

From RiceWiki
Revision as of 16:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA022945

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022945, complete gene.

LocusTag

OsI_23046

Ensembl Transcript ID

BGIOSGA022945-TA

Ensembl Protein ID

BGIOSGA022945-PA

Length

4983

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17912495..17917477

Sequence Coding Region

17912495..17912700,17912783..17912822,17912978..17913075,17913820..17913868,17914034..17914071
,17914645..17915195,17915309..17915469,17916033..17916242,17916322..17916514
,17916587..17916727,17916824..17916912,17917364..17917477

Genome Context

<gbrowseImage1> name=IndicaChromosome06:17912495..17917477 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:17912495..17917477 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACACGAAACGTCCGCCGCCGGGACAGGCAACAGATGGCCTCGCCCTGGTGACCTCTTCGAAGCGGCAGCATCTCGATGCTGCCGGCATCGGCGGCGGCGCGGTGCATGCCCGGCCGGCGCCGACCTCGCCGGCGGGGAAATGGCAGCTCCGCCCGAGCATGCTCGTCCTCTTCTTCGTCGCCCAAGTGTACGACCTCGACCCCAAGGAGGAGCTGAGGTACAACAGGCGACTTCGTCGAGTGATACGTGAAGAGAATGCTATTTCCCAGAGGAGGACACTTGAAGTATTTCAGAAATCGCTTGATAACGCCTGTCAGAATCTTGTTAATCATATTAACTGCTCCCTTCAATCCCTTACTGCACGAACTGATATTCTCCACCATGAAGTGGAACAACTCAAACGTTCAAATTCTAATCGGCGTTACAGATCAGAGGCAAATCGAGAGCATGCTGCCATCATCGAGGAAGTGAATCAAGAACAAACAGTTGTTAGATTTGCCACAAGTGAAGCTCATGAGGGGCAACGAGTTGAGTTGAGGTTCCTCAATAAGTTGAACGAAGATGCCATCATTTATACGAAGGACAAAATTACAGCAGATGATGGAAACGCTATCAAAATTGCCATATATAAGGATAACCAGATAGTTAGATCTGGTCAATTGTCTTCAGCAAGAATTCAAATTTTGGCTCTTCACGGTAACTTTAATGATCATGTCCCTGAAAATTGGACCGAAGGTCAGTTTGATGAACGCATAGTGAAGAATACAAAAGGGCCTGTGTTAGGAGGAGTTTGTCAACAAGTGAAGCTGAAGAATGGGGAGGCCTCTCTTTCTGATGTCTATTTTGATATACCGTCTGGAAAGACTGAAAGTGGGAAGCTCATTCTGGCAGCAAAAGTTCATTGCAGTGACAGAACTGGGCTTCGAATTAAGGAGGCTGTGACGAATCCTGTTAAAGTGCAAGTTCACCGAAATAAACACAACAGAAACAGTGACTGTCCAAAGCTGAAAGATGAAGTATATCGTTTAAAGGGAATTTCAAGAACGGGAGGTCGTTTTGAATGGCTTAAAAATAATCAGATCTACACCGTGGAGGACTTTTTAAAGGCTTTAAATAAAAATGAAGAAAAGATCCGCACTGAGTGTTTCAAGCTAAAGAATAATAGCAAGGATTGGAAAGATACAGTTAAACATGCTAGAGAGTGTGATCTCGAAGGCAATTGCAAGCTGAAATCTTGTAGAGTTGAAGAGCAAAATGTTACACTCTTCTTTAACTGCGTACATGATCTTGTTGGAGCAAAATTTTGTCATCACTATGTTACAAAAGACGATTTTAATTCAGAACAGCAGGATGCAGTGATTTGTCTGAAACAACAAGCATACGATGTTCTGGATGGTATTCACTTTGACCACAAAATGGAAGAAAATGGTCCAGTATCTTTGTTTTCAGCTATGAACACAAGCATTATTGGTGGTGATGCTTCCGTTCCCTTCACAGACACAGCAGGACAAAATCCTCCAGATTTCCATGTTGCATATCGAGAAGTTGAGACTGCTCATCATGCTAACATTTATCAAGCACATGAATTGCCTCAAGCATTTCGTAACAATAATAATGCATTTGTAAGACCAAGTTTCCAAGAACAAATTCCTTGTGAACAATACGGCTTGCTGGCCTTTCAAGGTAATCAAGTAGATGTTGCTACTCAGATGGACCCTGGATATCCCCTGAATATTACACAGACATCTGAAGCCCCACTGGAGATATCTGAAGGTACTCCTGGAGGCAATAACATCATACCAACGAATGTGCCACTGCCACGGAACGTCAGCTGTGACATATATGAAGGATTACTTGACATTATTGTCGACTCTCTGAACTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MHTKRPPPGQATDGLALVTSSKRQHLDAAGIGGGAVHARPAPTSPAGKWQLRPSMLVLFFVAQVYDLDPKEELRYNRRLRRVIREENAISQRRTLEVFQKSLDNACQNLVNHINCSLQSLTARTDILHHEVEQLKRSNSNRRYRSEANREHAAIIEEVNQEQTVVRFATSEAHEGQRVELRFLNKLNEDAIIYTKDKITADDGNAIKIAIYKDNQIVRSGQLSSARIQILALHGNFNDHVPENWTEGQFDERIVKNTKGPVLGGVCQQVKLKNGEASLSDVYFDIPSGKTESGKLILAAKVHCSDRTGLRIKEAVTNPVKVQVHRNKHNRNSDCPKLKDEVYRLKGISRTGGRFEWLKNNQIYTVEDFLKALNKNEEKIRTECFKLKNNSKDWKDTVKHARECDLEGNCKLKSCRVEEQNVTLFFNCVHDLVGAKFCHHYVTKDDFNSEQQDAVICLKQQAYDVLDGIHFDHKMEENGPVSLFSAMNTSIIGGDASVPFTDTAGQNPPDFHVAYREVETAHHANIYQAHELPQAFRNNNNAFVRPSFQEQIPCEQYGLLAFQGNQVDVATQMDPGYPLNITQTSEAPLEISEGTPGGNNIIPTNVPLPRNVSCDIYEGLLDIIVDSLNS</aaseq>

Gene Sequence

<dnaseqindica>1..206#289..328#484..581#1326..1374#1540..1577#2151..2701#2815..2975#3539..3748#3828..4020#4093..4233#4330..4418#4870..4983#ATGCACACGAAACGTCCGCCGCCGGGACAGGCAACAGATGGCCTCGCCCTGGTGACCTCTTCGAAGCGGCAGCATCTCGATGCTGCCGGCATCGGCGGCGGCGCGGTGCATGCCCGGCCGGCGCCGACCTCGCCGGCGGGGAAATGGCAGCTCCGCCCGAGCATGCTCGTCCTCTTCTTCGTCGCCCAAGTGTACGACCTCGACCCGTCCGCGTTGTGTTTGATTTAATTTCTCTCCCAGGGAAATTTGTTGCTTGATCTGTGTTCTGTTCTTTGCTGATGCGCGCAGCAAGGAGGAGCTGAGGTACAACAGGCGACTTCGTCGAGTGGTGAGACGAAGCTCTGCAAATCTCTAGCTCCATCCATCTCACATGCTGTTTGCTAGAGTCTTGGATCAAAATATTCAAATTAAATCTTTTCCCAGCATTTCTTTTACTACTCCACTACTCTTTTGGTAGCTCGTTTAAGAACTGTGCTTGTGCAGATACGTGAAGAGAATGCTATTTCCCAGAGGAGGACACTTGAAGTATTTCAGAAATCGCTTGATAACGCCTGTCAGAATCTTGTTAATCATATTAACTGGTAAGATTTCACACTCTCTGCAAGTAGGATCGAAGTTAAGAAGATATAAAAAATCATTCCCATTGCAAGGCTAATTAAGGGAGTTCAGTTCAGTGTGTCTAGGAGTAATTTCCAATCTATTGTACACTATATTTTGCTCTTTGAGCTTATCTCAATGCAATTTTTCGATCCCCAAATTCCTCTTTCCCTTCTAAATTCACATTGCAAGGCTAATTAACGAGTGCCATTACCATTTGTGATGCCAATTCATTCCTGATCTAGAAGAGTGGTTAAAATAAGATCGCAATTTACCTCTCTGTTTGCTCAGGTAATACTGTTTTTTTCATCCCTTTGTTAAATCCAGAAAACCAAAAGCAAGTGCACTTGAAATCTGACTTAGAATCCCATTAAATAGCTTAGTTACCTTTTATGGTATATGTTGCAACTATTTATTTACAGTTTTTTTAATCAATACGCATCAAGCGTGTAAGATTCCTTTTTCATACCTCTAAATGCTTGTTTGGGTTGCTACTGATTTTATCATTTGTAGTTCTTCTATAATATTGTTATGTTAACTGTCAAGCTGATCAAATATTAGTGTTGTTCGACCACATAAGACAAATCTAATCTATGGTGGTGCTACGATACAAGTAAATTAAATCACACTCATTGAACTCCAATCTTATCTTTATCTATGAGCAAGAAAGTTTCAGTTTGTTTTCTATTCGAACTAACCTATTTTCTCTTCCACTTATTTGGTTGCAGCTCCCTTCAATCCCTTACTGCACGAACTGATATTCTCCACCATGAAGTGGTTAGATTTCAGATGTTAAAACCACTATTATTTATAGTTCAATCCCCTTGTTGACTCAAACTATGAAGTGTTTGCCTTCCTTTAATAAGAAAAAGAAAACAAAATGGTGTTTCCCAGAGAAAACTTCAATTCTTAGCTTATAATGATTCTCCACACAACTTGCAGGAACAACTCAAACGTTCAAATTCTAATCGGCGTTACAGGTATGGTATTTGAAAGCTATTGAAATATGCATCACTGATTTTCTGTTATTCCCAGTATGCAATGCTAAGTATCAGTGTTTCATGACATAGCTTCTTCATATTGTTCTGACCAGTTCTTATCAATCACTTAAACTGACTTGTGAACTACCGTGTATTTGATGGCATTCTATTTATGGATCTCCCTTAAATAACTTTTGCAATGTTCTTTTCATGCTATTGTGATGTACTCTCTCCATTTCATATTATAAGTCGTTTGACTTTTTTATTAGTCAAACTTTTTTTTGTTTGACCAAATTTATAGAAAAATTAGCAAAATCTATAACATCAAATTAGTTTCATTAAATTCAACTTTGAATATATTTTGATATAATGTTTGTTTTGTATTGAAAATGTTATAATATTTTGCTACAAAGAAGTTTGACTAAGAGAAAAGTCAAACGACTTATAATATGAAATAGAGAGAGTACTAAAGTTGTGAATTTCGGACAATTTGAAGTACTAAAAGATGTTGAAATGACACTAGAATTAATACACAATGGTGTTTCATACAATCCGTGTATAATCGTATTGCAGATCAGAGGCAAATCGAGAGCATGCTGCCATCATCGAGGAAGTGAATCAAGAACAAACAGTTGTTAGATTTGCCACAAGTGAAGCTCATGAGGGGCAACGAGTTGAGTTGAGGTTCCTCAATAAGTTGAACGAAGATGCCATCATTTATACGAAGGACAAAATTACAGCAGATGATGGAAACGCTATCAAAATTGCCATATATAAGGATAACCAGATAGTTAGATCTGGTCAATTGTCTTCAGCAAGAATTCAAATTTTGGCTCTTCACGGTAACTTTAATGATCATGTCCCTGAAAATTGGACCGAAGGTCAGTTTGATGAACGCATAGTGAAGAATACAAAAGGGCCTGTGTTAGGAGGAGTTTGTCAACAAGTGAAGCTGAAGAATGGGGAGGCCTCTCTTTCTGATGTCTATTTTGATATACCGTCTGGAAAGACTGAAAGTGGGAAGCTCATTCTGGCAGCAAAAGTTCATTGCAGTGACAGAACTGGGCTTCGAATTAAGGAGGCTGTGACGAATCCTGTTAAAGTGCAAGTTCACCGAAATAAACGTAAGATTTCCTTCAGAAAACCTCTTCCTTTTCATAGGATTATCACTGATACTACAAATAGCATAATTTGCACTGTATGATCTATGGCATTTCTCTCGTCTCCCTTTTTTCAGACAACAGAAACAGTGACTGTCCAAAGCTGAAAGATGAAGTATATCGTTTAAAGGGAATTTCAAGAACGGGAGGTCGTTTTGAATGGCTTAAAAATAATCAGATCTACACCGTGGAGGACTTTTTAAAGGCTTTAAATAAAAATGAAGAAAAGATCCGCACTGTAAGGCCTTTGGGATTCCCAACCAACTTCTCACAAGCACTTACAAATTATTATTATTATTATTATTATTTCTTCAAATGCCAGAGCGCACGCACAAATTAAGCCCTTACAGAAATTGGCACTGTTTGCTGACTTGCTGAGTTTATGTTAACTAGGGTATTTTTCCACACATTTTGTGCAACTCTAGTTGAATTGGATTTAATATACAACTCTTAGCTCATATTTTCATATGTGCAATTGATATACAATAGATATTAAAGTAGAATTTGATTTAATGTACAACTCTTATCTTCTGTTTCTATAGATACAACTGTATTTTGTATACAACTATTGCTATCAATCTACACCCTTATAATTTGGTCCCACCACAATCGAACGACATAGATTTTATGATTTTTCACAAATATTGTGATAATTTCTAGGCCTTCAGAGTGAACGTGGTGGTTTCTTTTTGAGCTATAGTATAATAGATTAGAAGCATACATAAATGATATGTTTATCGTTCAGTTAGTTTATTGTTCAGTTGATAAAATGAAACAACTTATGCTTTTATTGGAGTTCAGGAGTGTTTCAAGCTAAAGAATAATAGCAAGGATTGGAAAGATACAGTTAAACATGCTAGAGAGTGTGATCTCGAAGGCAATTGCAAGCTGAAATCTTGTAGAGTTGAAGAGCAAAATGTTACACTCTTCTTTAACTGCGTACATGATCTTGTTGGAGCAAAATTTTGTCATCACTATGTTACAAAAGACGATTTTAATTCAGAACAGCAGGTATACGTTGATACGAGTTAATTTACAGATCCAAACCTTGATGTGAACTTAGAACAGTAGGTGCAATTTTCTTTTTCAGGATGCAGTGATTTGTCTGAAACAACAAGCATACGATGTTCTGGATGGTATTCACTTTGACCACAAAATGGAAGAAAATGGTCCAGTATCTTTGTTTTCAGCTATGAACACAAGCATTATTGGTGGTGATGCTTCCGTTCCCTTCACAGACACAGCAGGACAAAATCCTCCAGATTTCCATGTTGCATATCGAGGTAAGGAACTGGTCTTCTTCTCTTGTCCTTCAGCAGACACCACGCTTGATGATTTGTTGTTTGGTACTGCAGAAGTTGAGACTGCTCATCATGCTAACATTTATCAAGCACATGAATTGCCTCAAGCATTTCGTAACAATAATAATGCATTTGTAAGACCAAGTTTCCAAGAACAAATTCCTTGTGAACAATACGGCTTGCTGGCCTTTCAAGGTTGGTTCTGCATCTGTTTCGTTTCTGGAAGATATGTTTTGAAGAATATTTTTTTTATTGAACACTGAAGAGATTTGGAAAATTTTCAAATGAAAGGTAATCAAGTAGATGTTGCTACTCAGATGGACCCTGGATATCCCCTGAATATTACACAGACATCTGAAGCCCCACTGGAGATATCTGAAGTAAGTTAAGTTTCTGTCCACTAGACTAAAGCCTGTATCGTTCTTGCTAGAACAGAGATGATATTATTGTCATGTGCTCTACATTGTCAATTTTATGGAGGATTTGGGGATTTGGGGAATCAACAGTTTCATTGACCTGGCCCTGAAGATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTATATATCTATTTTGTACATGAGATGAAAAATGACCAAAATACCCCTGGGGTACAGCACACTATTACACTAATACCCTTAACATACATCACATTCTTTGCAGTTTAAACATACTGATCAGTGCATGCCATGAATATGAGTCTGCTTCTGATTGTTGAGGTCATTGCATTGTTGCATGATTCTCCTATCTCACACATTGGATGTTAATGCTTAACGAGTCTTCCTTTTGCAGGGTACTCCTGGAGGCAATAACATCATACCAACGAATGTGCCACTGCCACGGAACGTCAGCTGTGACATATATGAAGGATTACTTGACATTATTGTCGACTCTCTGAACTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022945