Os09g0484300
| Gene Name |
Os09g0484300 |
|---|---|
| Description |
Ubiquitin domain containing protein |
| Version |
NM_001070049.1 GI:115479840 GeneID:4347416 |
| Length |
6436 bp |
| Definition |
Oryza sativa Japonica Group Os09g0484300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:19341478..19347913 |
| Sequence Coding Region |
19342430..19342695,19344063..19344596,19346001..19347798 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:19341478..19347913 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:19341478..19347913 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccgacgccgacggcttcggttgcgagcaccgccgaccctccaagcgccgccgcgacgggcccgatcatgccctcctcccggtgtcccgagaggtgctgatgggccaccccgatgaccccgccgccgccgccgccgccgtgggggcggaatcctcctcggcctcgtcatacctcggggttgtggcggccgccgcgtccgcctccgcctccgcggcggggggtttctcctgcggggcccacttcttcgtgcgggccaccgactcgaggaccgtgtcgatgcacgcggcgtggggggacaccgtgggcgccgtgctcgcgcacctcgccgaccgggggtacggccgcgacctccgcctcgtctacgccgggaggcagctcgcgccggagaccgccctcgccgacctccgcctcccgccggactccacgctgcacctcctctcccgcctccgctccaccccctacccggacgcgtggcagctcgcttcctacatcgcctccaccgccgccgccgccaagtccgaccccgcccacaccagctccgccgccaacatcaacgagctcgtcaaggagttcatcctctgcgcgcaccgagccaacatgcggcagcgccatgatcgcgactcccccctcttcgatgcccaacccacgggggaccacgcggcgcagtacctcgagattttccgccaggcgggcgcccccttcgcgctggttcgcctctacgccgctaatccctcctccgcctcccaccatcacgcggagaacgccatcaaatgcttcctcaccatggatccttcggccttgccacccgacgtgctgccggtcatggcgccggtgctgcttgaattttgcgggttgctctctttttctgtgggcaagagggatgaactctatatatcatcccgttctatgcttgcaacagtgctcagcttgccttctgggcttcccccttgcatcaagtcaccttccaagctgatcgagcaggtccttccgtttgctgaagaaatagtgggagtggttatggacgaacttgcatcactggatatgactgtgtcatccaaaaaccttgaagacctctcaaatttctttaaagtgctgcgccagcaggcactccgttgggttcccaatggggggccattgcccaagaatctgtataacagtgagcgtgggcataatgacacgtgggtgtggaagttgcacgaaatgtcaatgaacttattgaacagggtggatgagtgcttgaagaggttggaaatggatctgtccttgtcatcggagaacagaggggtcaatataagtcaatctcgatgggttgcccggtcacatatgctggtcatgctgacacaactagattttatatcgatgatttatgaggatttggcacataacctacggcttgtgttgctggcacacagagatcctctcaatgccctcgtgcgctgttccaagaggaatgagcatctccactggcttgtgaagcataaagacctcctttgctttgaatcaagaaggaatttagtcttgatgatgctacctgagggaaaggatgaatacggggagcttcatgagatgttgattgatcggcaacacttattggacgagtcctttgaatacattatacaggccagacccagtgagcttcgcagtgggctatttatggagtttaagaatgaggaagcgacaggccctggagttctgagggaatggttctgcatggtgtgtcaagctcttttcagcccgcagcaagttctcttctcgccttgtcctagtgatcgacagaggttcttcttgaacggaacatctgctgtggatccactgcacctgaaatacttcatattttcaggacgaataattggattagcattgatgcatagagttcaagtagggatcacattggaccgcacattattcttgcatcttgctgggagaagtattaaattggaagatatttctgctgcagaccctgtcatgtatgcaagctgtaaaagaattttagagatggatgctgctgttgttgatggtcttgaactaacattttcccgagatgttcatgaattagggtctcgaaggactattgagctttgctcaggagggaaggatctccatgtaaatatcaggaacagagagctttatattgaccttcttattaagagtaccttcgtggattccatatcagttcagttaacccatttcgtgcgcggatttagtgacattctagttgatccggaactccagaaagtattttttgagtttttggatctagaagacttcgacggaattctatggggaagccacaaaactataaatctggaagattggaaattacatactcaggctgttgagagcttgtcaattgagcaacagaggcagctgctgttcttttggacttcagttaaatatttaccctcagatggttttggtgggctggcctcaaaactgtacatatataaggtatctgagtcagctgaccgtctcccatcgtcacatacctgcttttaccggctctgcctgcctgcttatccatccttgaaagtgacgagaaaccagctgcagaagatcacacaagagcatgtgagctgtagctttggcacatggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MSDADGFGCEHRRPSKRRRDGPDHALLPVSREVLMGHPDDPAAA AAAVGAESSSASSYLGVVAAAASASASAAGGFSCGAHFFVRATDSRTVSMHAAWGDTV GAVLAHLADRGYGRDLRLVYAGRQLAPETALADLRLPPDSTLHLLSRLRSTPYPDAWQ LASYIASTAAAAKSDPAHTSSAANINELVKEFILCAHRANMRQRHDRDSPLFDAQPTG DHAAQYLEIFRQAGAPFALVRLYAANPSSASHHHAENAIKCFLTMDPSALPPDVLPVM APVLLEFCGLLSFSVGKRDELYISSRSMLATVLSLPSGLPPCIKSPSKLIEQVLPFAE EIVGVVMDELASLDMTVSSKNLEDLSNFFKVLRQQALRWVPNGGPLPKNLYNSERGHN DTWVWKLHEMSMNLLNRVDECLKRLEMDLSLSSENRGVNISQSRWVARSHMLVMLTQL DFISMIYEDLAHNLRLVLLAHRDPLNALVRCSKRNEHLHWLVKHKDLLCFESRRNLVL MMLPEGKDEYGELHEMLIDRQHLLDESFEYIIQARPSELRSGLFMEFKNEEATGPGVL REWFCMVCQALFSPQQVLFSPCPSDRQRFFLNGTSAVDPLHLKYFIFSGRIIGLALMH RVQVGITLDRTLFLHLAGRSIKLEDISAADPVMYASCKRILEMDAAVVDGLELTFSRD VHELGSRRTIELCSGGKDLHVNIRNRELYIDLLIKSTFVDSISVQLTHFVRGFSDILV DPELQKVFFEFLDLEDFDGILWGSHKTINLEDWKLHTQAVESLSIEQQRQLLFFWTSV KYLPSDGFGGLASKLYIYKVSESADRLPSSHTCFYRLCLPAYPSLKVTRNQLQKITQE HVSCSFGTW</aaseq> |
| Gene Sequence |
<dnaseqindica>5219..5484#3318..3851#116..1913#aacctcctcgtcccccttcccctcgttttcccccaaattccgctcctaaaccctccctctcctctcactccggccgcgattctcccgccgccccggcgatggtcccgatctaagcatgtccgacgccgacggcttcggttgcgagcaccgccgaccctccaagcgccgccgcgacgggcccgatcatgccctcctcccggtgtcccgagaggtgctgatgggccaccccgatgaccccgccgccgccgccgccgccgtgggggcggaatcctcctcggcctcgtcatacctcggggttgtggcggccgccgcgtccgcctccgcctccgcggcggggggtttctcctgcggggcccacttcttcgtgcgggccaccgactcgaggaccgtgtcgatgcacgcggcgtggggggacaccgtgggcgccgtgctcgcgcacctcgccgaccgggggtacggccgcgacctccgcctcgtctacgccgggaggcagctcgcgccggagaccgccctcgccgacctccgcctcccgccggactccacgctgcacctcctctcccgcctccgctccaccccctacccggacgcgtggcagctcgcttcctacatcgcctccaccgccgccgccgccaagtccgaccccgcccacaccagctccgccgccaacatcaacgagctcgtcaaggagttcatcctctgcgcgcaccgagccaacatgcggcagcgccatgatcgcgactcccccctcttcgatgcccaacccacgggggaccacgcggcgcagtacctcgagattttccgccaggcgggcgcccccttcgcgctggttcgcctctacgccgctaatccctcctccgcctcccaccatcacgcggagaacgccatcaaatgcttcctcaccatggatccttcggccttgccacccgacgtgctgccggtcatggcgccggtgctgcttgaattttgcgggttgctctctttttctgtgggcaagagggatgaactctatatatcatcccgttctatgcttgcaacagtgctcagcttgccttctgggcttcccccttgcatcaagtcaccttccaagctgatcgagcaggtccttccgtttgctgaagaaatagtgggagtggttatggacgaacttgcatcactggatatgactgtgtcatccaaaaaccttgaagacctctcaaatttctttaaagtgctgcgccagcaggcactccgttgggttcccaatggggggccattgcccaagaatctgtataacagtgagcgtgggcataatgacacgtgggtgtggaagttgcacgaaatgtcaatgaacttattgaacagggtggatgagtgcttgaagaggttggaaatggatctgtccttgtcatcggagaacagaggggtcaatataagtcaatctcgatgggttgcccggtcacatatgctggtcatgctgacacaactagattttatatcgatgatttatgaggatttggcacataacctacggcttgtgttgctggcacacagagatcctctcaatgccctcgtgcgctgttccaagaggaatgagcatctccactggcttgtgaagcataaagacctcctttgctttgaatcaagaaggaatttagtcttgatgatgctacctgagggaaaggatgaatacggggagcttcatgagatgttgattgatcggcaacacttattggacgagtcctttgaatacattatacaggccagacccagtgagcttcgcagtgggctatttatggagtttaagaatgaggaagcgacaggccctggagttctgagggaatggttctgcatggtgtgtcaagctcttttcagcccgcagcaagttctcttctcgccttgtcctagtgatcgacagaggttcttcttgaacggaagtaagtttcctcatccccagtattaaattatcacttaagaccctgttcttatgttatggcactatgatcatacatcttgaaagaaaaatcctgaatcgaataagctaatgatgacttgagggtggatccagtaattggcatgcatggtataatagaaaacaaaatatcttggctagtatttctttttgaacttaagttggcctagtattagtaaaggcttacctttgcttgtctacttggttcagcacctctttttgttttttcttttgataaaacttggttcaatactgcactaatgagatgctgccactttttatttgcgaatttatactacgatgctatgacaagctgttttccacttgtatgttctggcacttagtaatctggaatgcaatgtgtcattggcaccgcacattatacacacaaattttggtggactggagaaattttgtttgagcaaccattgctaatctccagttatataagtagccaaccacacaccagagcagttcctgccagggcatcgagaaccacccattctggtggtgtgaattgtcatggctgtttctctgtagactgttggtgcccagacctatgtggaagttggtactcaccatacctgtggaaaactttgctttgtagatttccttccattgcaagtctgtagtgaagtttaacgtgcatggaatgagaaatagtgaatcattagttggtcagctgcaatatatgctcattcctcattgagactttccaaacagtccaacatatcaaggctatgctaacagttttgtggatatcatccttgccaactggatcagaaagttccgatgaacaaccttcaagatgaaaagtatcaccgcagttgttggaaattgtgtcacactgttaaaggagctctgggaaatgcagtgagcctgtgacacagctgcacaaccatagacttccccaatgtgtctcttatgtgcacaagggacaaatggaataggtacatagatattaagatgagtttctattttatgctgctaacgaaaatgctaatttccaacttttggtctacaagctgataaataaaagctggcttatttgataagcctaagcttggccagagaggtaacgtgacactgttaggttgaaagtgaggcatgcttcatgcaaaaaggaggataagtccttgctggcacaatatgcaattagtatgttatcttgaaaagttctatgagaataccataatttttagcttggcagtttattctagctgtagctgtttgagccattttcacttttcttaattatatttaattgattcttatatattcattattcatgatacagctgatgtctacaagtatgttcactgaatgtctgaatctcttctaatttttttatgcttattgtatgttgcagcatctgctgtggatccactgcacctgaaatacttcatattttcaggacgaataattggattagcattgatgcatagagttcaagtagggatcacattggaccgcacattattcttgcatcttgctgggagaagtattaaattggaagatatttctgctgcagaccctgtcatgtatgcaagctgtaaaagaattttagagatggatgctgctgttgttgatggtcttgaactaacattttcccgagatgttcatgaattagggtctcgaaggactattgagctttgctcaggagggaaggatctccatgtaaatatcaggaacagagagctttatattgaccttcttattaagagtaccttcgtggattccatatcagttcagttaacccatttcgtgcgcggatttagtgacattctagttgatccggaactccagaaagtattttttgagtttttggatctagaagacttcgacggaattctatggggaagccacaaaactataaatctggaagattggaaattacatactccataaagcgctcacaaagaaaaatttgcccattatattggtttggaagtattccatgtgacatttgccatgcacatccacccaagattttttcttcccgagtttaataccaagatataattggataccttggcacattgtaagaaatgagggctttgtatgcatgtcatttttatggcggaaaatgctgctattatcattgaagaccaataaggagtttgaatgtgggccatatcattttcatgtttttctgttcacaatctcaacagattctgaaaccttaacctgtaagatttcaaacggcgccaaaaatattaagccactttgtcctgtagtcttgttcaggttatattgtgggatcatgtggagtcttattatggtcttttttgttcacaaatgccatatcttgaaatttgaacctgtaggcatcaaatggaataaaaaatgttattactttctgaaaagtaaatgaaactaaggttaaatcttgtttgtctctttggtgttttaacattgaagctgtttcaacgtgatccttgtatttgtcactgttttgatgacaactgtttgtgttttttttttctttcactttactggtccggcgctgttgtatacctataagttgaggtcaatcgatgatatcctatgctgggttttctgtcaagtctcagttaaccatagacgtgggtttttctctaccttacagcaccaatattattttatcttctaggagctgtacaacaaccactctttccaatttcatggaacttctgttacttgatacaattgttgttgctcctttgtgtgaaatgctgagaacaatgaaacaattttcttaacttagttccgcatcaatctggggttccataacccagagcttgtgctgctgccaatattagctatggagtagcatattaaatacagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatcgtttttacactgaggcctggtttagttcccaactttttcttcaaacttccaacttccatcacatcaaaactttcctacaaacataaacttccaacttttccgtcacatcattccaatttcaatcaaacttccaattttggtgtgaactaaacacaccctgacataaaatcaaatacgctccttaaatcttgcatgcacttttctagaatttcaatagaaacttactttgtagacttatctagcataaccatacacttatctagcataaccattgtgtgtttccgattgatttggtgtatgcttgataagaattaagaaaacttgtttattcacactgcaggctgttgagagcttgtcaattgagcaacagaggcagctgctgttcttttggacttcagttaaatatttaccctcagatggttttggtgggctggcctcaaaactgtacatatataaggtatctgagtcagctgaccgtctcccatcgtcacatacctgcttttaccggctctgcctgcctgcttatccatccttgaaagtgacgagaaaccagctgcagaagatcacacaagagcatgtgagctgtagctttggcacatggtagatgccgcccttatggtaatccaatatggtaaattctgtacatacccaagttagggtcgatttacctgcctcaattgaagctagaaattaaaagcaatatgctatcttttgtttgttttgtacatatttgaggtgttgtgggccatttaatctagttacgcataatcagaaaagagcaggttcctttcattctccctcttttgaaccaggcttccatttttcatatactttctggagaaatgtggtgggagcatttgcatcgtgctatgctcacaagctctggaagccagttaaggcttaaaccatgtcataaaggtaattgcaacgtgtagtagccatgtggcttggtgttcctggtggagctgaaattctgcatagagtcgagtagagttaaagtgatcatctgtttgtgaatctggacaaaatcggtcactgaaactttgaaggtatgcgactctgctaatgtgaagttaaaactcggatatgctttgctgtttagtaccagcaggcagcagaaattttctgggaatcagccagaaaccggtgtctcagcagctgacaagtgatatggaccatactctgcctgaacatatggattccaacgatgtctttggtatatgaatcacaattatatgttgacaactacacccggtggaatcggatgcctagttgatgtgtattcacacctttcaaatgttttgcatctgtgagagaaattccataccaaatcccgctgaaactctggcaaatttccacgggatgcttgtgcacggttgcacctacagtttctccacctttgcgagccgccgatggagagatcattgctgcactctaatcatctatcctctgattcattttgatttcactcatcttcctcccctcttcaacattttgtacaaccaatgaaatgcagttacttggcagcgctgaaacacaaatgccgaatagttttg</dnaseqindica> |
| External Link(s) |
