Os09g0484800

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0484800| Description = Similar to Pirin-like protein| Version = NM_001070050.1 GI:115479842 GeneID:4347417| Length = 2432 bp| Definition =...")
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Gene Name

Os09g0484800

Description

Similar to Pirin-like protein

Version

NM_001070050.1 GI:115479842 GeneID:4347417

Length

2432 bp

Definition

Oryza sativa Japonica Group Os09g0484800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19361595..19364026

Sequence Coding Region

19361884..19362034,19362130..19362197,19362940..19363106,19363213..19363720

Expression

GEO Profiles:Os09g0484800

Genome Context

<gbrowseImage1> name=NC_008402:19361595..19364026 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19361595..19364026 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgtcgatggagaagccccggcaggtggtgcggaagttcctggcgcggccgcagcacgagggcgtcggcgccgtcgttcgccggagcatcgggaggtttgagctgaggtacttcgatccgttcctcgtcctggacgagttctcagtgtctgctccggctgggttccctgaccatccacacagaggtttcgagaccgtcacttacatgctcgagggagccgtgacgcacgaggacttcgagggccaccgtggcacgatcaaggccggcgacgtgcagtggatgacggccggacgcggcatcgtgcactcggagatgccggcggggcccggcacctccaggggcctccagctctgggtcaacctctcctcccacaacaagatgatcgagccggggtaccaggagatacagagcaaggacatcgcgagcacgacgtcggacggcgtgacggtgcgggtgatcgccgggcagtcgatgggcgcccggtcgccggtgcgcacgcggacgccgaccatgtacctggacttcacggtccgcccccacgcggcggcgcggcagccggtgtgcgcgacgtggaacgcgttcgcgtacgtgctggagggggagggcgtgttcggcggcggcggcggcgacaaggccggggcgcaccacctgctgctgctcggccagggcgacggcgtcgaggtgtggaacaggtcggacaagccgctccggttcctgctcatcgccggcgagcccatcggcgagcccgtggcgcagctggggcccttcgtcatgaacaccgaggaggagatcgacatgaccatcaacgacttcgagttcagcatcaatggcttcgagaaggccaagcactggaagtctcaggcgctggtggcgctgggcttagagtag</cdnaseq>

Protein Sequence

<aaseq>MTTSMEKPRQVVRKFLARPQHEGVGAVVRRSIGRFELRYFDPFL VLDEFSVSAPAGFPDHPHRGFETVTYMLEGAVTHEDFEGHRGTIKAGDVQWMTAGRGI VHSEMPAGPGTSRGLQLWVNLSSHNKMIEPGYQEIQSKDIASTTSDGVTVRVIAGQSM GARSPVRTRTPTMYLDFTVRPHAAARQPVCATWNAFAYVLEGEGVFGGGGGDKAGAHH LLLLGQGDGVEVWNRSDKPLRFLLIAGEPIGEPVAQLGPFVMNTEEEIDMTINDFEFS INGFEKAKHWKSQALVALGLE</aaseq>

Gene Sequence

<dnaseqindica>290..440#536..603#1346..1512#1619..2126#aaaaaacgccaagaaaccatctgtcgcttttgaccccgggaagcagcagcagcagcagcggcggcggcgtatcggggcgtaacggaatcgaggtgtgttgccgctatataaagaggaagaaaataggccccaaaccaaaccaccataccctactacaaaccataggcatcgccggcaagggaggtcggaggaagaagaaagggtcgtcgaggtgttcttgaattctgaatttctgatcaagtcgatcgttcgccggcgacggcaaaggtggtaactggtagtactatatatgacgacgtcgatggagaagccccggcaggtggtgcggaagttcctggcgcggccgcagcacgagggcgtcggcgccgtcgttcgccggagcatcgggaggtttgagctgaggtacttcgatccgttcctcgtcctggacgagttctcaggtgagtgaattgcttctggctcggttttgatcatctggtttagagtgatagagatttgcattttttgatcgtcttcttgatcgaatcctgtgcagtgtctgctccggctgggttccctgaccatccacacagaggtttcgagaccgtcacttacatgctcgaggtaggcagagtcttttaccacagttcacattctgttcgtcggtagtagaacatccaactgcatatagagcggccatgaaaattccttgcttaatccccagtgatacgtacagacagcagcgtcttttgacaaccacatcacacggatcagcagaaacgaattaaacgcgtttcatttgtcaacaacgcaaacctgataggctgatacggagtagtagtttttagcaaattcagaacgtttctttccgtcaaattgaagaatctaacccatccaaacgggccctgttgccttgctctgcctttggttggtagccttcctacgtcaaccacctcgcgtcgcatatacttttccgcgctcaaaactctgcttcacaccttgaactcatcattggcagatcgattagtaatatatatcttcgcctaaacccaacatcagtcaagccaagccgtgtaaaatgaaatagaaagaaacaatttctacaggaagacgtacgatggccttgatagtttggttttgcattgaccgtgttcttttttttttaaaaaaaaagagaggagtatttttaatccggtctttacatccaacagaaaatatgaaaccatttaaattgggaacttagcctaaacaacttaatctgaaattcactcctataaaaatttaaactcagaatctacgtgctacttaggccagtgcattgaccgtgttcttattggaactgacgtgaatggtgggtgtttttcagggagccgtgacgcacgaggacttcgagggccaccgtggcacgatcaaggccggcgacgtgcagtggatgacggccggacgcggcatcgtgcactcggagatgccggcggggcccggcacctccaggggcctccagctctgggtcaacctctcctcccacaacaagatgtgcgtcacgacccgtccttgtcatctccttcgttttttttccccactctcggatgtcgtgtcgctgcattggcatggtggtttgacacgcgtgtggtgcgtgcaggatcgagccggggtaccaggagatacagagcaaggacatcgcgagcacgacgtcggacggcgtgacggtgcgggtgatcgccgggcagtcgatgggcgcccggtcgccggtgcgcacgcggacgccgaccatgtacctggacttcacggtccgcccccacgcggcggcgcggcagccggtgtgcgcgacgtggaacgcgttcgcgtacgtgctggagggggagggcgtgttcggcggcggcggcggcgacaaggccggggcgcaccacctgctgctgctcggccagggcgacggcgtcgaggtgtggaacaggtcggacaagccgctccggttcctgctcatcgccggcgagcccatcggcgagcccgtggcgcagctggggcccttcgtcatgaacaccgaggaggagatcgacatgaccatcaacgacttcgagttcagcatcaatggcttcgagaaggccaagcactggaagtctcaggcgctggtggcgctgggcttagagtagtagggtgcaaccatgggacgacacgacatgtcgacatatgctctgaacgaagggaaaaaaaatggaatagttctttctctcatgatacgaggttgttttatttatttgttttttttctcttccaaacaaatagcgatcactttgtgtacatatccggcataaggttgctgcttgcttttcaattaggcaggtgcttcaaatcttcggcccaatgactaaaaatcatgtacttactccacaagttcataaacaagtccttttggactttcactgtgtctaatgcaagatttgtttttatagaactct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0484800, RefSeq:Os09g0484800