BGIOSGA023137

From RiceWiki
Revision as of 16:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023137

Description

Os06g0576900 proteinPutative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA023137, complete gene.

LocusTag

OS06G0576900

Ensembl Transcript ID

BGIOSGA023137-TA

Ensembl Protein ID

BGIOSGA023137-PA

Length

3233

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23222628..23225860

Sequence Coding Region

23222628..23222693,23223183..23223590,23224515..23225720,23225807..23225860

Genome Context

<gbrowseImage1> name=IndicaChromosome06:23222628..23225860 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:23222628..23225860 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTAGACTCCATAATTTGTTGCTTCTGTTAGTGTGCTTCTTCTCCACGCTATTGCTCGCACAGGTGATGAGTGCTGCTGCAGGGATGGCAGCAGTGAAAGTGAGCACCACACCCATCTTCTCCAAGATCCCACGAGCTCAGACGACCAAGGATTTTCAGGTGCTACTACGCATTGAGGCGCCACCACTAGTGGATCTCAAGGGCCGTGTCCCCATTGATCTTGTCATGGTGCTCGACGTTGACGTCGAATCAGTGAGTCTGGAACCAGTGAAAAAAGCCATGAAATTCGCCATCCAACAACTCAGTGATAAAGACTCTATCGCCATCTTTGGGCCATCCATGAGCCGAGAGGTCATCCCTAAGTTTATGAGTATTCATGGTAGCCGAAGGGTTGCTGAGAAGAAGGTAGATGAGTTGGAGGGCCGTCGCATTGCCGGTCCAGCAAGGTCAAGCTTGGATGAGGCCCTCAAGATGCTGGAGGAGCAGCCGGCGAGCTCTTCCGACGGCCGCGCGAAGTTCATCGTGTTGGTGACCGACGGAGAGGACATCACCCGCTTCAACTCCGGCATGCCGGAGTGGTTCACCGCCGCCCTGGCCAAGTACCCCGTGCACGCCTTCGGCCTGGGCGCCTCGCACGACGCCGCGGCGCTGCGCCTCATCGCCCAGCGATCGCATGGCACCTACTCCTTCCTCGACGACGGCAACGTCGACAAGGTCGCAAGCGCGCTCGCCCTGTGCCTCGGCGGTCTCAAGTCCGTCGCTGCCGTCGGCGCGCGCGTCGTCCTCAAGGCGGCGAGCGGCAGCGGCGTGAGGATCGACAGGATCAGCTCCGGGGACTACGCGAGTTCAGTCTCCCAGGTCGACGGGGGCGCCTCCGGCGAGATCGTCATCGGCGCCCTCTACGCCGGCGAGGTCAAGAGCTTCGTCGTCCACCTCTACGTGCCCGCCGCGCCGCCGGCATTGCGGACGGTGGAGGGCGTCTGCTGCGACCAGCAGCAGCTGCTCGTCGCCAGCCTCGATTGCCAGCTGTACACTAGTGGCGGCGTGGACGTCGACGACGCAGCAGCACCTGTTGATCTCGTCGTGGAGAGGCCTAACGCCGCCGTGCTGGTTCCCTCCGCCATTGTCGTCAACCAAATCTTCCAGTTCAGTGTGCTGAAGATGTTCGACACCTTCATCGACAAAGAGATCCTCCACCGCACTCCGGTGACCGGGAGGAACGACCTGGGGAGGAAGCTGCTGGCGAGGTGGGAGGAGCTCGTGCTCGAGCACCAGTTCTGGGTCGGCCTCGATCTGGGATCCCTCGACGGCGAGATAACCGCGGTGGCGAACAGCCTGAGCAAGCAGTACATCGTTGGCACGGCGTACATATTCTCATGGATGTCGAGCTACAAGATGCAGCGGCCGACGGCGATGGGGTCGCCGGCGAACGTGGTGGGCGTGTTCGTGACGCTGGAGGTGCACCTGACGCTGCAGGTGGCGATCACGCTGCCGGAGAGCGGCGGCGACGAGGGTGAGTGCCACGAGTGCGAGTACACCTGCGAGAAGCAGCTGCCGCCTGCGCCGCCGCTGCTGGAGGCGTCTGGACACGATGGCAGCAGCTACCGTCTCAACGCCGCGTACGAGGGCGTCGTATCGCTCGACGACATCAACCAATTCATGATCAAAATCTATCAGGGCATGGTGAAAGCGAACAATTTGAAGCAATGCCAGCCACGTGCTGTCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGRLHNLLLLLVCFFSTLLLAQVMSAAAGMAAVKVSTTPIFSKIPRAQTTKDFQVLLRIEAPPLVDLKGRVPIDLVMVLDVDVESVSLEPVKKAMKFAIQQLSDKDSIAIFGPSMSREVIPKFMSIHGSRRVAEKKVDELEGRRIAGPARSSLDEALKMLEEQPASSSDGRAKFIVLVTDGEDITRFNSGMPEWFTAALAKYPVHAFGLGASHDAAALRLIAQRSHGTYSFLDDGNVDKVASALALCLGGLKSVAAVGARVVLKAASGSGVRIDRISSGDYASSVSQVDGGASGEIVIGALYAGEVKSFVVHLYVPAAPPALRTVEGVCCDQQQLLVASLDCQLYTSGGVDVDDAAAPVDLVVERPNAAVLVPSAIVVNQIFQFSVLKMFDTFIDKEILHRTPVTGRNDLGRKLLARWEELVLEHQFWVGLDLGSLDGEITAVANSLSKQYIVGTAYIFSWMSSYKMQRPTAMGSPANVVGVFVTLEVHLTLQVAITLPESGGDEGECHECEYTCEKQLPPAPPLLEASGHDGSSYRLNAAYEGVVSLDDINQFMIKIYQGMVKANNLKQCQPRAVA</aaseq>

Gene Sequence

<dnaseqindica>1..66#556..963#1888..3093#3180..3233#ATGGGTAGACTCCATAATTTGTTGCTTCTGTTAGTGTGCTTCTTCTCCACGCTATTGCTCGCACAGGTTTAACTCCTTTCTTTTAACCTTCTTTTTAAGGAGAACTTTCTTTTAACTTTTATATCTTAAAATTTTCACATATGGGTATCGATAGGATGGTGCACGTAAAGGACATCAACATCGTGTGTAGGGATTCCATGCACAATTTATTATTGGGACCATATATTTGTTGTCATTTGACCGGCCGATCAACATACAAATAACTCCATCCCCCTCAAAAAATATATATATACAAATAACTCTACTTATTTAAAACTATATATACTTGTATACAATATCTCTACTATGGCATTAATATTTAGTTACTTGCCAATATGTAACAACGGATTTGTTCTTGCTTGAGAACACTCCTAGATTAATGTTTAGCTGTTTTACAGTTGGTTTGTACCATTTGAAGTCTTTCAAAAATTGGGTATAACTGATACACAAGAAAAAAAAATGAGGTGAAAAACTTATCTTAATGCGTTGCTGTCACATACACATTCTTGTATGCAGGTGATGAGTGCTGCTGCAGGGATGGCAGCAGTGAAAGTGAGCACCACACCCATCTTCTCCAAGATCCCACGAGCTCAGACGACCAAGGATTTTCAGGTGCTACTACGCATTGAGGCGCCACCACTAGTGGATCTCAAGGGCCGTGTCCCCATTGATCTTGTCATGGTGCTCGACGTTGACGTCGAATCAGTGAGTCTGGAACCAGTGAAAAAAGCCATGAAATTCGCCATCCAACAACTCAGTGATAAAGACTCTATCGCCATCTTTGGGCCATCCATGAGCCGAGAGGTCATCCCTAAGTTTATGAGTATTCATGGTAGCCGAAGGGTTGCTGAGAAGAAGGTAGATGAGTTGGAGGGCCGTCGCATTGCCGGTCCAGCAAGGTCAAGCTTGGATGAGGCCCTCAAGGTATGTGCTTTCTTTGGTTTGTGTATTTCTACATTGAGATATTGATACATTTTTCCTAATATATTTTTAGTCCTTGGTCCACTTGCATACTATAAGAAAACCACAACAATGATATTTGATCAGCTTTGTTATTTATCAATTGTATAATATTGTCTTATTTGTTTAATGTATGTCCTAAAAGTGCACAAGTAATTAACATAGGAATATAGAAAGTATTTTTACCACTGAAATGGATATCCTATACATCATTTGCATGTCATCTAACTAGTTATGAAAATTTATTAGACTATCTGACAATATAAATAATTGTGTGCTATATTATTTTACAATCATGCAACTTTAAATTTAATCTAAATGAGTTAAAATTTTATCGACATATCAATATTATCAATTTTGTTAACATCTTTTGATAACTACTTAGGCTGTATTCGGAGGAGGGGGTTGGGAACCACTCCTCCCTAGCACGCAAAACAAAGTTCATTTTATTGCATGATTAATTAAGTATTAACTATTTTTTTTAAAAAAAATAGATTAATGTGATTTTTTAAAACAGCTTTCATATAGAAAGTTTTTGTATAAATCACACCGTTTTGCAGTTTGAAAAGTGTGCGCACGGAAAATGAGAGAGGTGGGTTGGGAAAATGGGGAGAAGAACACAGCCTTAATTGGTTGCCATTTCGGAGATAGGAGAAAACAAGGGAGATATCCCCTTAATTAGTGAAAAACTAGCTCCATAAAAATGTAACTTCAGAATAAATAATTAAATGTAACTCTACTTTTCTTTTCAATTTCTGGAATAACTCTAGATGTATTTTCTTGCTTATATAGATATTGTTTTCTTTTTCATATTGGCAAGGATCAATACCAAAGTGTTTTTTTTCTATAAAAGAAAAAATCATTCATATTATTCTGATTTGCGTGCAGATGCTGGAGGAGCAGCCGGCGAGCTCTTCCGACGGCCGCGCGAAGTTCATCGTGTTGGTGACCGACGGAGAGGACATCACCCGCTTCAACTCCGGCATGCCGGAGTGGTTCACCGCCGCCCTGGCCAAGTACCCCGTGCACGCCTTCGGCCTGGGCGCCTCGCACGACGCCGCGGCGCTGCGCCTCATCGCCCAGCGATCGCATGGCACCTACTCCTTCCTCGACGACGGCAACGTCGACAAGGTCGCAAGCGCGCTCGCCCTGTGCCTCGGCGGTCTCAAGTCCGTCGCTGCCGTCGGCGCGCGCGTCGTCCTCAAGGCGGCGAGCGGCAGCGGCGTGAGGATCGACAGGATCAGCTCCGGGGACTACGCGAGTTCAGTCTCCCAGGTCGACGGGGGCGCCTCCGGCGAGATCGTCATCGGCGCCCTCTACGCCGGCGAGGTCAAGAGCTTCGTCGTCCACCTCTACGTGCCCGCCGCGCCGCCGGCATTGCGGACGGTGGAGGGCGTCTGCTGCGACCAGCAGCAGCTGCTCGTCGCCAGCCTCGATTGCCAGCTGTACACTAGTGGCGGCGTGGACGTCGACGACGCAGCAGCACCTGTTGATCTCGTCGTGGAGAGGCCTAACGCCGCCGTGCTGGTTCCCTCCGCCATTGTCGTCAACCAAATCTTCCAGTTCAGTGTGCTGAAGATGTTCGACACCTTCATCGACAAAGAGATCCTCCACCGCACTCCGGTGACCGGGAGGAACGACCTGGGGAGGAAGCTGCTGGCGAGGTGGGAGGAGCTCGTGCTCGAGCACCAGTTCTGGGTCGGCCTCGATCTGGGATCCCTCGACGGCGAGATAACCGCGGTGGCGAACAGCCTGAGCAAGCAGTACATCGTTGGCACGGCGTACATATTCTCATGGATGTCGAGCTACAAGATGCAGCGGCCGACGGCGATGGGGTCGCCGGCGAACGTGGTGGGCGTGTTCGTGACGCTGGAGGTGCACCTGACGCTGCAGGTGGCGATCACGCTGCCGGAGAGCGGCGGCGACGAGGGTGAGTGCCACGAGTGCGAGTACACCTGCGAGAAGCAGCTGCCGCCTGCGCCGCCGCTGCTGGAGGCGTCTGGACACGATGGCAGCAGCTACCGTCTCAACGCCGCGTACGAGGGCGTCGTATCGCTCGACGACATCAACCAATTCATGATCAAAATCTATCAGGTTAACACACGATTTCCTCAAAAGTAAATTTTCAGTAATTACTATGATGAGTACGGTAAAAAAAAATCTAATGATGCATGGTGCAGGGCATGGTGAAAGCGAACAATTTGAAGCAATGCCAGCCACGTGCTGTCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023137