Os06g0116200

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Revision as of 09:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0116200| Description = Similar to Transcription activator GRF3 (Fragment)| Version = NM_001063153.1 GI:115466037 GeneID:4339928| Length = 3...")
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Gene Name

Os06g0116200

Description

Similar to Transcription activator GRF3 (Fragment)

Version

NM_001063153.1 GI:115466037 GeneID:4339928

Length

3183 bp

Definition

Oryza sativa Japonica Group Os06g0116200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:892175..895357

Sequence Coding Region

892533..892540,892631..893070,894115..894457,894896..895151

Expression

GEO Profiles:Os06g0116200

Genome Context

<gbrowseImage1> name=NC_008399:892175..895357 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:892175..895357 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgagctcgtcgccctcggcggcggcgccggggataggagggtaccagccgcagcgcggggcggcggtcttcacggcggcgcagtgggcggagctggagcagcaggcgctcatttacaagtacctcgtcgccggtgtccccgtcccgggcgatctcctcctcccaatccgcccccactcctccgccgccgccacctactccttcgccaaccccgccgccgcgcccttctaccaccaccaccaccacccctctctgagctattatgcctactatggcaagaagcttgaccctgagccgtggcgttgccgccgcaccgacggcaagaagtggcggtgctccaaggaggcgcaccccgactccaagtactgcgagcgccacatgcaccgtggccgcaaccgttcaagaaagcctgtggaatccaagaccgctgcccctgcgccccagtcgcagccccagctgtccaatgtcacgaccgcgactcacgacaccgatgcgcctctcccgtcactcactgtgggtgctaaaacccacggtctgtcccttggtggtgctggctcgtcgcagttccatgtcgacgcaccatcgtacggcagcaagtactctcttggagctaaagctgatgtgggtgaactgagcttcttctcaggagcatcaggaaacaccaggggcttcaccattgattctccaacagatagctcatggcattcactgccttccagtgtacccccatacccgatgtcaaagccaagggactctggcctcctaccaggtgcctactcctactcccaccttgaaccttcacaggaacttggccaggtcaccatcgcctcgctgtcccaagagcaggagcgccgctcttttggtggtggagcgggggggatgctaggaaatgtgaagcacgagaaccagccgctgaggcctttcttcgatgagtggcctgggaggcgagactcgtggtcggagatggatgaggagaggtccaaccagacctccttctcgacaacccagctctcgatctccatcccgatgcccagatgtgattga</cdnaseq>

Protein Sequence

<aaseq>MLSSSPSAAAPGIGGYQPQRGAAVFTAAQWAELEQQALIYKYLV AGVPVPGDLLLPIRPHSSAAATYSFANPAAAPFYHHHHHPSLSYYAYYGKKLDPEPWR CRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVESKTAAPAPQSQPQLSNVTTA THDTDAPLPSLTVGAKTHGLSLGGAGSSQFHVDAPSYGSKYSLGAKADVGELSFFSGA SGNTRGFTIDSPTDSSWHSLPSSVPPYPMSKPRDSGLLPGAYSYSHLEPSQELGQVTI ASLSQEQERRSFGGGAGGMLGNVKHENQPLRPFFDEWPGRRDSWSEMDEERSNQTSFS TTQLSISIPMPRCD</aaseq>

Gene Sequence

<dnaseqindica>2818..2825#2288..2727#901..1243#207..462#acactcacacgctgcagcagcagcagcagcagcagctttcccaccgactcctccccctcctccattaatggccgccaccaagaaccctccaacccccacgtgacctcctcctcccctccccctccccctccccctcccgacctcgccgccggcgacctcccttcttcttcctgcttgcctgctcgcttgcctgcctggttcgaccgatgctgagctcgtcgccctcggcggcggcgccggggataggagggtaccagccgcagcgcggggcggcggtcttcacggcggcgcagtgggcggagctggagcagcaggcgctcatttacaagtacctcgtcgccggtgtccccgtcccgggcgatctcctcctcccaatccgcccccactcctccgccgccgccacctactccttcgccaaccccgccgccgcgcccttctaccaccaccaccaccacccctctcgtaagctctctctccatcttttttccacaaatggtccatctcttgtttgcttcatgcttgggtattcaaatctgagaaaaatttatatatgtgtgcgcgtgtgctttcttgggactttttcttttttttttgtttcttctttcaggacaggatctctttgctgccctgctcattgggattgatttgctattgctctcacgatttattgatagatgaacgtacacggatctttgcttatagtatgtccgtttaagctgttcgattgattctttgctcactcttatatcctaagcaaattaagcatatagtagttattaccattaccaactttgcattgggttgatgaaatgttgaagtggtgcattttgatctagttttaatatgaacaatgatgaatgctgatatggattcaatgtgcctgtgctcatgtcactgcagtgagctattatgcctactatggcaagaagcttgaccctgagccgtggcgttgccgccgcaccgacggcaagaagtggcggtgctccaaggaggcgcaccccgactccaagtactgcgagcgccacatgcaccgtggccgcaaccgttcaagaaagcctgtggaatccaagaccgctgcccctgcgccccagtcgcagccccagctgtccaatgtcacgaccgcgactcacgacaccgatgcgcctctcccgtcactcactgtgggtgctaaaacccacggtctgtcccttggtggtgctggctcgtcgcagttccatgtcgacgcaccatcgtacggcagcaagtatcccctctaatctcattgactctgtgttgaatgcttatttgaattaagcttgcctagattgattgcatattatgctggaatagagctgatctggtagctttcttaaaagggttgagacactcaaaatagtatttgagctctaatgttgttgatgcttattgctcaagtagtgaacctaccctcattccagtaattataagtgtgtgaggctgcctaagaatttgtcgatcagagcttattcaatgagttagtcagatgagtgatactgccaatttacatgtgaccataaccccaactaaaaattttgtacctggattatgttagttaaatctgtgtattgcattccatccatccttgatgctacaaacctctgtgggcacaatgtcataagcatatgtctgttgcttgtgcctttagccctattatactgttgctttttgcagtaatattgtacgcttttccagatcacctaagccctagctgattttgacctttattgccctaactcctgattatgttttgagaaatagtgttaacagttgtcatgttctggggtgtttttggtccatgccctctaaaatcttggtaccgtcttttttatgctggaaaattttgcttgtgtcatcttttttgtgtgccataccttagtttagtatttcctcctctgctagcaatcacaaaataaaaatattgtaccttcgacaccatccttatgcttgtgctgcatgcatggcatatgttctagtttcgtgtcattttgcatttgcatcttgctagatgactgacaaagcttattttgctccttcgactatttttcgttctttttccttttttaactatagtaggttgtcttattatcgttttggtagcatttttcctatgcagctgcttttatgtcctccccttgagttgtagaaatcccttagctactgtgaacctgtaatcatcccattatattccatttgatgctgcgcaaatctacatgtactgtgtctgagtctggtgtctggtcctaattttcatgtatcaatggctatgcaggtactctcttggagctaaagctgatgtgggtgaactgagcttcttctcaggagcatcaggaaacaccaggggcttcaccattgattctccaacagatagctcatggcattcactgccttccagtgtacccccatacccgatgtcaaagccaagggactctggcctcctaccaggtgcctactcctactcccaccttgaaccttcacaggaacttggccaggtcaccatcgcctcgctgtcccaagagcaggagcgccgctcttttggtggtggagcgggggggatgctaggaaatgtgaagcacgagaaccagccgctgaggcctttcttcgatgagtggcctgggaggcgagactcgtggtcggagatggatgaggagaggtccaaccagacctccttctcgacaacccagctctcgatctccatcccgatgcccagatgtgggtcccctatcggtccgcgtctaccttgagcatcccttcaccaacatttctctcacacaattcattccattttctttgatgatgcaggtgattgagaactttgctgcttgtggcagcggggtggacctctaccccgcattttaccgctgctagtgagttggatcagtgattgcgcctcccctggttctttgttcaattgtatcgtgctatgaactagttaagagaaccctactttttttttctagtagaagagacagaaaactcttatccatcatcatgttttaagattccacgatgttttgtacctgcaacccacgacctgccggctgctggaagttactggctgtctgtaatgtttgtagtagatgatctatgatgtatcatgtatctatctacttgttccgaattgcggaaaccaaagccgataatctggcatgtgccaacgtcctcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0116200, RefSeq:Os06g0116200