Os06g0118000

From RiceWiki
Revision as of 09:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0118000| Description = Peptidase A1, pepsin family protein| Version = NM_001063162.1 GI:115466055 GeneID:4339938| Length = 1132 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0118000

Description

Peptidase A1, pepsin family protein

Version

NM_001063162.1 GI:115466055 GeneID:4339938

Length

1132 bp

Definition

Oryza sativa Japonica Group Os06g0118000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:977317..978448

Sequence Coding Region

977667..978194

Expression

GEO Profiles:Os06g0118000

Genome Context

<gbrowseImage1> name=NC_008399:977317..978448 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:977317..978448 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggcgtgccgccgcagcgcgccgcgctcgtcccgaccttcgtctccacgccgttgctgagcagcagcaccatgtcgccgacgttctacagggtgctcctccgctccatcatcgtggcgggacgcccgctccccgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcggattccgccgacggcgtaccaggcgctgcgcgcggcgtttaggagcgcgatgaccatgtaccggccggcgccgccggtgtccatcctcgacacgtgctacgacttttctggcgtccgcagcatcaccctgcccagcatcgccctggtgttcgacggcggggccaccgtcaacctcgacgcggcggggatcctgctccaaggctgcctcgccttcgcgcccaccgccagcgaccgcatgccagggttcatcggtaacgttcagcagcgcacgctcgaggtggtgtacgacgtccccggcaaggccattcgattccggagcgccgcctgctaa</cdnaseq>

Protein Sequence

<aaseq>MFGVPPQRAALVPTFVSTPLLSSSTMSPTFYRVLLRSIIVAGRP LPVPPTVFSASSVIDSATVISRIPPTAYQALRAAFRSAMTMYRPAPPVSILDTCYDFS GVRSITLPSIALVFDGGATVNLDAAGILLQGCLAFAPTASDRMPGFIGNVQQRTLEVV YDVPGKAIRFRSAAC</aaseq>

Gene Sequence

<dnaseqindica>255..782#tcacctacgccaacggcgcgacggcgaccgggacgtatagctccgacgacctcacactgggcccctacgacgtcgtcaggggcttcctcttcggctgcgcgcacgccgaccagggaagcaccttcagctacgacgtcgccggaaccctggctctcggcggcggctcacagtctttcgtgcagcagacggcgagtcagtacagcagggtgttctcgtactgcgtcccgccgtcgacgagctccttcgggttcatcatgttcggcgtgccgccgcagcgcgccgcgctcgtcccgaccttcgtctccacgccgttgctgagcagcagcaccatgtcgccgacgttctacagggtgctcctccgctccatcatcgtggcgggacgcccgctccccgtgccgcccactgtcttctccgccagctctgtgatcgactccgccaccgtcatctcgcggattccgccgacggcgtaccaggcgctgcgcgcggcgtttaggagcgcgatgaccatgtaccggccggcgccgccggtgtccatcctcgacacgtgctacgacttttctggcgtccgcagcatcaccctgcccagcatcgccctggtgttcgacggcggggccaccgtcaacctcgacgcggcggggatcctgctccaaggctgcctcgccttcgcgcccaccgccagcgaccgcatgccagggttcatcggtaacgttcagcagcgcacgctcgaggtggtgtacgacgtccccggcaaggccattcgattccggagcgccgcctgctaaattaatttgcttgcttgccaaactagcttggtttattaattagcttggttgatgaaataattagtcaatttaatcgctgtttatcttctcatgacatgtttatcctacagtactagtagagcatctatgatctctatggaaagggattaaagtagctggcttgcagcatgcattgtctgctaaagtttaggctagctagcaaagctcttttgtttatgttgtctgcaataattagttaattatcttgatgtcatttgtgctcgtgtgagattgtaatatcgagttatgtccatcttatcaagtcatgtactacttttcccatatctatagcctttttacatgatttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0118000, RefSeq:Os06g0118000