Os06g0121500

From RiceWiki
Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0121500| Description = Peptidase A1, pepsin family protein| Version = NM_001063173.1 GI:115466077 GeneID:4339950| Length = 1496 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0121500

Description

Peptidase A1, pepsin family protein

Version

NM_001063173.1 GI:115466077 GeneID:4339950

Length

1496 bp

Definition

Oryza sativa Japonica Group Os06g0121500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1136135..1137630

Sequence Coding Region

1136148..1136316,1136424..1137583

Expression

GEO Profiles:Os06g0121500

Genome Context

<gbrowseImage1> name=NC_008399:1136135..1137630 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1136135..1137630 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacaagtgtcttgccgctactactactccacatcttcatcctctcgtccatgggctctcatggccatggccatggtgatggaggagctgagaatcgcgagcactacattgtcgtggaaaccagctccttgttgaagcccaaagccatctgctccggtctcaaggcaatgccatccagcaatggcacgtgggtggcgctgcaccgcccctacggcccgtgctcgccgtcgccgacgacaacctcgccgccgttgttggtcgacatgctacgctgggacaagctccacaccgacgccatccggaggaaggccaccgccggcggcgacgtcgtgcttgagccggacaagccgatcgtcgacgtgcagcagtcggactacaagatgcaggcgagcttcggcatcggcaccggtggcagatcgggctcgtcgtcgtcgtcgtcgtcaagaatcagccgcccgtcggcgatcgacgaccccatcctggcgcagccgatgtccatcgacaccagcatcgacctgccatggatccagtgcgcgccgtgccccatgccggagtgctacccgcagcagaacgccttgtttgacccgaggaggtcgaggacctccgccgccgtgccgtgcggctccgccgcctgcggcgagctcggccgctacggcgctggttgctccaacaaccagtgccagtacttcgtcgactacggcgacggcagggccacctcggggacgtacatggtggacgccctcacgctcaacccgagcaccgtcgtcatgaacttccgcttcggctgcagccacgccgtgcgcggcaacttcagcgcctccacctccggcaccatgttcgcgaggacgccgctggtgcgtaacccgagcatcatcccgacgctgtacctggttcgcctcaggggcatcgaggtcggcgggcggcggctgaacgtgccgccggtggtgttcgccggcggcgcggtgatggactcgagcgtgatcatcacgcagctgccgccgacggcgtacagggcgctgcggctggcgttccggagcgccatggcggcgtacccgcgggtggcgggagggagggccgggctggacacctgctacgacttcgtccggttcacgagcgtgacggtgccggcggtgtcgctggtgttcgacggcggcgcggtggtgaggctggacgcgatgggagtcatggtggaggggtgcctcgcgttcgtgccgacgccgggagacttcgcgctcggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgtcgtcggcggctccgtcggcttccgccgtggcgcctgctga</cdnaseq>

Protein Sequence

<aaseq>MTTSVLPLLLLHIFILSSMGSHGHGHGDGGAENREHYIVVETSS LLKPKAICSGLKAMPSSNGTWVALHRPYGPCSPSPTTTSPPLLVDMLRWDKLHTDAIR RKATAGGDVVLEPDKPIVDVQQSDYKMQASFGIGTGGRSGSSSSSSSRISRPSAIDDP ILAQPMSIDTSIDLPWIQCAPCPMPECYPQQNALFDPRRSRTSAAVPCGSAACGELGR YGAGCSNNQCQYFVDYGDGRATSGTYMVDALTLNPSTVVMNFRFGCSHAVRGNFSAST SGTMFARTPLVRNPSIIPTLYLVRLRGIEVGGRRLNVPPVVFAGGAVMDSSVIITQLP PTAYRALRLAFRSAMAAYPRVAGGRAGLDTCYDFVRFTSVTVPAVSLVFDGGAVVRLD AMGVMVEGCLAFVPTPGDFALGFIGNVQQQTHEVLYDVVGGSVGFRRGAC</aaseq>

Gene Sequence

<dnaseqindica>14..182#290..1449#aacttcgtttaccatgacgacaagtgtcttgccgctactactactccacatcttcatcctctcgtccatgggctctcatggccatggccatggtgatggaggagctgagaatcgcgagcactacattgtcgtggaaaccagctccttgttgaagcccaaagccatctgctccggtctcaagggtaatgtgttaacgtaattctgcagtaattacttactaattaactgctgattaatttaggcttgcttaatgtacgcctaatacgtgtacatgagtacatgcgtgcagcaatgccatccagcaatggcacgtgggtggcgctgcaccgcccctacggcccgtgctcgccgtcgccgacgacaacctcgccgccgttgttggtcgacatgctacgctgggacaagctccacaccgacgccatccggaggaaggccaccgccggcggcgacgtcgtgcttgagccggacaagccgatcgtcgacgtgcagcagtcggactacaagatgcaggcgagcttcggcatcggcaccggtggcagatcgggctcgtcgtcgtcgtcgtcgtcaagaatcagccgcccgtcggcgatcgacgaccccatcctggcgcagccgatgtccatcgacaccagcatcgacctgccatggatccagtgcgcgccgtgccccatgccggagtgctacccgcagcagaacgccttgtttgacccgaggaggtcgaggacctccgccgccgtgccgtgcggctccgccgcctgcggcgagctcggccgctacggcgctggttgctccaacaaccagtgccagtacttcgtcgactacggcgacggcagggccacctcggggacgtacatggtggacgccctcacgctcaacccgagcaccgtcgtcatgaacttccgcttcggctgcagccacgccgtgcgcggcaacttcagcgcctccacctccggcaccatgttcgcgaggacgccgctggtgcgtaacccgagcatcatcccgacgctgtacctggttcgcctcaggggcatcgaggtcggcgggcggcggctgaacgtgccgccggtggtgttcgccggcggcgcggtgatggactcgagcgtgatcatcacgcagctgccgccgacggcgtacagggcgctgcggctggcgttccggagcgccatggcggcgtacccgcgggtggcgggagggagggccgggctggacacctgctacgacttcgtccggttcacgagcgtgacggtgccggcggtgtcgctggtgttcgacggcggcgcggtggtgaggctggacgcgatgggagtcatggtggaggggtgcctcgcgttcgtgccgacgccgggagacttcgcgctcggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgtcgtcggcggctccgtcggcttccgccgtggcgcctgctgacgaccgcaccttgtgatcgacccgtttaatttgagatttgctccggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0121500, RefSeq:Os06g0121500