Os06g0121800

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0121800| Description = Peptidase A1, pepsin family protein| Version = NM_001063174.2 GI:297605078 GeneID:4339951| Length = 1523 bp| Defini...")
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Gene Name

Os06g0121800

Description

Peptidase A1, pepsin family protein

Version

NM_001063174.2 GI:297605078 GeneID:4339951

Length

1523 bp

Definition

Oryza sativa Japonica Group Os06g0121800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1152607..1154129

Sequence Coding Region

1152607..1152721,1152781..1154129

Expression

GEO Profiles:Os06g0121800

Genome Context

<gbrowseImage1> name=NC_008399:1152607..1154129 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1152607..1154129 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctctcatggccatggccatggtgatggaggagctgagaatcgcgagcactacattgtcgtggaaaccagctccttgttgaagcccaaagccatctgctccggtctcaagggcttgcttaatgtacgcctaatacgtgtacatgagtacatgcgtgcagcaatgccatccagcaatggcacgtgggtggcgctgcaccgcccctacggcccgtgctcgccgtcgccgacgacaacctcgccgccgttgttggtcgacatgctacgctgggacaagctccacaccgacgccatccggaggaaggccaccgccggcggcgacgtcgtgcttgagccggacaagccgatcgtcgacgtgcagcagtcggactacaagatgcaggcgagcttcggcatcggcaccggtggcagatcgggctcgtcgtcgtcgtcgtcgtcaagaatcagccgcccgtcggcgatcgacgaccccatcctggcgcagccgatgtccatcgacaccagcatcgacctgccatggatccagtgcgcgccgtgccccatgccggagtgctacccgcagcagaacgccttgtttgacccgaggaggtcgaggacctccgccgccgtgccgtgcggctccgccgcctgcggcgagctcggccgctacggcgctggttgctccaacaaccagtgccagtacttcgtcgactacggcgacggcagggccacctcggggacgtacatggtggacgccctcacgctcaacccgagcaccgtcgtcatgaacttccgcttcggctgcagccacgccgtgcgcggcaacttcagcgcctccacctccggcaccatgtcgctcggcggcggccgccagtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccggacccgagctcctccggcttcctctcgctcggcggcccggccgacggcggcggcgcggggaggttcgcgaggacgccgctggtgcgtaacccgagcatcatcccgacgctgtacctggttcgcctcaggggcatcgaggtcggcgggcggcggctgaacgtgccgccggtggtgttcgccggcggcgcggtgatggactcgagcgtgatcatcacgcagctgccgccgacggcgtacagggcgctgcggctggcgttccggagcgccatggcggcgtacccgcgggtggcgggagggagggccgggctggacacctgctacgacttcgtccggttcacgagcgtgacggtgccggcggtgtcgctggtgttcgacggcggcgcggtggtgaggctggacgcgatgggagtcatggtggaggggtgcctcgcgttcgtgccgacgccgggagacttcgcgctcggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgtcggcggcggctccgtcggcttccgccgtggcgcctgctga</cdnaseq>

Protein Sequence

<aaseq>MGSHGHGHGDGGAENREHYIVVETSSLLKPKAICSGLKGLLNVR LIRVHEYMRAAMPSSNGTWVALHRPYGPCSPSPTTTSPPLLVDMLRWDKLHTDAIRRK ATAGGDVVLEPDKPIVDVQQSDYKMQASFGIGTGGRSGSSSSSSSRISRPSAIDDPIL AQPMSIDTSIDLPWIQCAPCPMPECYPQQNALFDPRRSRTSAAVPCGSAACGELGRYG AGCSNNQCQYFVDYGDGRATSGTYMVDALTLNPSTVVMNFRFGCSHAVRGNFSASTSG TMSLGGGRQSLLSQTAATFGNAFSYCVPDPSSSGFLSLGGPADGGGAGRFARTPLVRN PSIIPTLYLVRLRGIEVGGRRLNVPPVVFAGGAVMDSSVIITQLPPTAYRALRLAFRS AMAAYPRVAGGRAGLDTCYDFVRFTSVTVPAVSLVFDGGAVVRLDAMGVMVEGCLAFV PTPGDFALGFIGNVQQQTHEVLYDVGGGSVGFRRGAC</aaseq>

Gene Sequence

<dnaseqindica>1..115#175..1523#atgggctctcatggccatggccatggtgatggaggagctgagaatcgcgagcactacattgtcgtggaaaccagctccttgttgaagcccaaagccatctgctccggtctcaagggtaatgtgttaacgtaattctgcagtaattacttactaattaactgctgattaatttaggcttgcttaatgtacgcctaatacgtgtacatgagtacatgcgtgcagcaatgccatccagcaatggcacgtgggtggcgctgcaccgcccctacggcccgtgctcgccgtcgccgacgacaacctcgccgccgttgttggtcgacatgctacgctgggacaagctccacaccgacgccatccggaggaaggccaccgccggcggcgacgtcgtgcttgagccggacaagccgatcgtcgacgtgcagcagtcggactacaagatgcaggcgagcttcggcatcggcaccggtggcagatcgggctcgtcgtcgtcgtcgtcgtcaagaatcagccgcccgtcggcgatcgacgaccccatcctggcgcagccgatgtccatcgacaccagcatcgacctgccatggatccagtgcgcgccgtgccccatgccggagtgctacccgcagcagaacgccttgtttgacccgaggaggtcgaggacctccgccgccgtgccgtgcggctccgccgcctgcggcgagctcggccgctacggcgctggttgctccaacaaccagtgccagtacttcgtcgactacggcgacggcagggccacctcggggacgtacatggtggacgccctcacgctcaacccgagcaccgtcgtcatgaacttccgcttcggctgcagccacgccgtgcgcggcaacttcagcgcctccacctccggcaccatgtcgctcggcggcggccgccagtcgctcctgtcgcagacggcggcgacgttcgggaacgcgttctcctactgcgtcccggacccgagctcctccggcttcctctcgctcggcggcccggccgacggcggcggcgcggggaggttcgcgaggacgccgctggtgcgtaacccgagcatcatcccgacgctgtacctggttcgcctcaggggcatcgaggtcggcgggcggcggctgaacgtgccgccggtggtgttcgccggcggcgcggtgatggactcgagcgtgatcatcacgcagctgccgccgacggcgtacagggcgctgcggctggcgttccggagcgccatggcggcgtacccgcgggtggcgggagggagggccgggctggacacctgctacgacttcgtccggttcacgagcgtgacggtgccggcggtgtcgctggtgttcgacggcggcgcggtggtgaggctggacgcgatgggagtcatggtggaggggtgcctcgcgttcgtgccgacgccgggagacttcgcgctcggcttcatcgggaacgtgcagcagcagacgcacgaggtgctctacgacgtcggcggcggctccgtcggcttccgccgtggcgcctgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0121800, RefSeq:Os06g0121800