BGIOSGA023637

From RiceWiki
Revision as of 16:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023637

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023637, complete gene.

LocusTag

P0017G10.21

Ensembl Transcript ID

BGIOSGA023637-TA

Ensembl Protein ID

BGIOSGA023637-PA

Length

3919

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:32658271..32662189

Sequence Coding Region

32658271..32658360,32658811..32658945,32659080..32659163,32659273..32659388,32659499..32659736
,32659838..32659951,32660086..32660160,32661002..32661034,32662088..32662189

Genome Context

<gbrowseImage1> name=IndicaChromosome06:32658271..32662189 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:32658271..32662189 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAGCAAGTTCGATACTGATGGCATTATCCGCGGCCGTGCTGGGCTTCTTCATTGGCATCTCTTTTCCAGTACAAATCACACCAAAGAAGGAGAAGAGCAAGATAGAAGCAGAGGCAGTACAGGTGTCGAGGAAGAAAGCAGCAGAGGAGAGGCTGCCTCCGGGCATCGTCGTCCGGGAATCTGATCTTCATCTCCGCCGCCTCTGGGGAAACCCAACATCCGACGTGGCGAGTGGCAAGCAGTACCTTCTGACCATGTCGGTGGGTTACACCGAGAAAGCCAATGTCAATGCAACTATTCACAAGTTATCAGACAAGTTTGACATAGTGCTGTTCCATTACGACGGGCGCACAAGTGAATGGGAGGAGTTCGAGTGGTCCAAGAAGGTTGTTCATGTCAGCGCCAGGAAGCAGGCCAAATGGTGGTTTGCCAAGAGGTTCCTGCACCCGAGCATCGTTGCGGCGTACGAGTACGTGTTCGTGTGGGATGAGGATCTGGGAGTTGACAACTTCACCGCGGAGGAGTACATCAGCATCGTCAGGAAACACGCCCTGGACATCTCGCAGCCGGGGCTCGACGGCACCAAAGGGAGGAGACAGTACCCTGTCACCGTCAGGAGGCCCTCCGGCGACATGCACAACTCCGGCAGGTTCGTCGAGTTAATTTCAGCCAAAAGTAAACGAGAACCGAATGAAATCTGCAATTCTGAATGCATGCAGAATGACTTGGTTCATGGTTGGGGTCTCGACTTCAATTTCTGGAGATGCGTCCACGAGCCTGAAAAGCATATAGGTGTCGTGGATGCGCAGTTCGTAGTCCATCGCGGCGTCCCAACGCTCGTAAGCCAGGGCAATGGAGAACAAGATGGAAGTAGTGCCAAGGTGAGATCCCGGCAGTTTGAGGAGATGCATACCTTCGACCGCAGAATTGCCAGCGCCGACAAGGCCCAAGCCAACGCCACCGCAGCAGAGCAGCATCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MKASSILMALSAAVLGFFIGISFPVQITPKKEKSKIEAEAVQVSRKKAAEERLPPGIVVRESDLHLRRLWGNPTSDVASGKQYLLTMSVGYTEKANVNATIHKLSDKFDIVLFHYDGRTSEWEEFEWSKKVVHVSARKQAKWWFAKRFLHPSIVAAYEYVFVWDEDLGVDNFTAEEYISIVRKHALDISQPGLDGTKGRRQYPVTVRRPSGDMHNSGRFVELISAKSKREPNEICNSECMQNDLVHGWGLDFNFWRCVHEPEKHIGVVDAQFVVHRGVPTLVSQGNGEQDGSSAKVRSRQFEEMHTFDRRIASADKAQANATAAEQHR</aaseq>

Gene Sequence

<dnaseqindica>1..90#541..675#810..893#1003..1118#1229..1466#1568..1681#1816..1890#2732..2764#3818..3919#ATGAAAGCAAGTTCGATACTGATGGCATTATCCGCGGCCGTGCTGGGCTTCTTCATTGGCATCTCTTTTCCAGTACAAATCACACCAAAGGTAACCTATGTTACTTATTACCTAATTAGTACGCATGTATATATGTATATGTCCTTAATTATATACATATATATGGAAAATTTAATTTAATTTATATATACTCATGAATATCTGTGCAATTGTACGTACGTGCATGCATTGCAGCTTGAATATTGCGCCTTTCTAATCCCTTGCGGTACAAACACAAACTCCAGCTCCTCGGCCAGCAACATCAGCATACTCAACAAGTACATGTCGTTGTGGGCGGCACCATTTTCCGTCCGTAACAGCACCACTGCCAACTTTTCGTCAAACGCCACTATTTCAGGGCCGGTATAATATATATCTCGTCTAGCTACTATATATATAGTGATATATATACAACGTAACTGTGTCGAACTAATTAATACTAATAACCAATTTGAGTAATACAAAAACGTGCGCAATTATATATATTGATGATGCTTGCAGAAGGAGAAGAGCAAGATAGAAGCAGAGGCAGTACAGGTGTCGAGGAAGAAAGCAGCAGAGGAGAGGCTGCCTCCGGGCATCGTCGTCCGGGAATCTGATCTTCATCTCCGCCGCCTCTGGGGAAACCCAACATCCGTATGATCGATCTGATCTTCATCTCTGCTTGCGCCATGCACAGGCCTCCATCACATATCGATGTCAGTGTAGCTAGCTTCTATGTATCGATCGATCGATCTCTTACATGCATGTTTGTATGAATGTACGTACAGGACGTGGCGAGTGGCAAGCAGTACCTTCTGACCATGTCGGTGGGTTACACCGAGAAAGCCAATGTCAATGCAACTATTCACAAGGTCATTAACTAACTGATCAGTAATTAATACTTACAAGATATATATGCTAGGTCCATTGATTGATTGATATATTCAAAATTAACACCTAGTAAATGCAATATACGCGCAGTTATCAGACAAGTTTGACATAGTGCTGTTCCATTACGACGGGCGCACAAGTGAATGGGAGGAGTTCGAGTGGTCCAAGAAGGTTGTTCATGTCAGCGCCAGGAAGCAGGCCAAATGGTAACCTCCCTGTAGCTACTCCATGCATGTCTCGATATACATCATTATTACATATATTAAGCATATATGGCTAAATGTGAGATCGAATTGATGAATTTAATTTCTTGCAGGTGGTTTGCCAAGAGGTTCCTGCACCCGAGCATCGTTGCGGCGTACGAGTACGTGTTCGTGTGGGATGAGGATCTGGGAGTTGACAACTTCACCGCGGAGGAGTACATCAGCATCGTCAGGAAACACGCCCTGGACATCTCGCAGCCGGGGCTCGACGGCACCAAAGGGAGGAGACAGTACCCTGTCACCGTCAGGAGGCCCTCCGGCGACATGCACAACTCCGGCAGGTTCGTCGAGGTGATGGCGCCTGTCTTCTCCAGGGACGCCTGGGCATGCGTCTGGCACATGATCCAGGCAAGCGCATTACGTACTATTTCTGAATTTATTCTCACTTACAGTTAATTTCAGCCAAAAGTAAACGAGAACCGAATGAAATCTGCAATTCTGAATGCATGCAGAATGACTTGGTTCATGGTTGGGGTCTCGACTTCAATTTCTGGAGATGCGTCCACGTAAGTACTTCTAATTACTACGACTCTGCAGCTCCATCTACATTATTCAGATTGTCATATGCTGTAGTACTATATTATATTATTGTGCTTGAAGAAATTGATCGATCGATCGATCATAATTAATTTGCATGCAGGAGCCTGAAAAGCATATAGGTGTCGTGGATGCGCAGTTCGTAGTCCATCGCGGCGTCCCAACGCTCGTAAGCCAGGTATATAGGTCAATTCTCTATGTGTCCCTAAAATTTCACGTGGTCCTTCGCCTGATCTTGAGATTTGCTTCATCTCTTATATAGAGTTTTTGTTACGATTTCTTATATATAATTCCGTTAGTAACCGTTAAAATGATCTTATTGCCCTGATTGATATATCAATAAAAGCTAACAATGTTCTACGTTCTATACAAGAATTATATTTGGATTGTGAAAAAAATAGTATGGGATAAATTACTAAATATGCACTTTCAAAATTCATTTTTTAAAAATGATTTTATTGAAACTAAAAAAATTGTGAAATTTTGCACCAAATTTAAAAGTAACTTTTTAATGAATATGTAGTTAAAAATGTGGGTTTTGTCATAACCATGTACCCTACTTATGTCACTATTATCACTTCATGCAAAGATTTTTTTTTTTAAAAAAAACGTTTTTCTTATTCAGTGCATTTTTTTAATATGCATTTCAGCCACTCTAATAATTTTGTGTAATTGCTCTCAAAAAATATTTTTTTGTCTAATTGAACATTGCTATTTACTGTAAGAATGCTTAAAATTTTGTAATATATATAACTAGCGACAATATAATAGTCATAAAAAACTTAATGGTAAACTATAACCGAATGGATGTTTAAGGGATCAATGAAGAAACTCGGGGATATGAAAAGGATCAGATAAATTCTACAACATAGAAAGGGTTAGTAATATATTTAGGAGGTATACAAAGAATTTCTCCATATGTGTACCTTGCCAGTTACTTGAGGTTTAATTTGAACCCGCAACTAGCTTGGTTGATTAAACGCTAGTTCATCAATAATTGTCTTTCTCTTGACAAATAGGGCAATGGAGAACAAGATGGAAGTAGTGCCAAGGTATGTAAAATACAACTATCTATCCGTTTGGACAAATTTTGTAGTCCTTACAAAGTACTTGCATGTACCAAAGAGCTATATTAAAAATTTTGTTAATTTACCTCGAGATACCTTAGAGGTATTAAATTTTACATTGCACATACCGATATCTACTCAAGAAGGGTAAAATCATTTTACTGTTTACGTATATGTCTATACTTACAACATTCTGAGAAAATCTCTCACGTTAACGAGAAAGATAAGCTGGACGTTAATGAGCAGAACAAATTATCACTGTATATAGTGAAATTTAATTGAAACCCTAAATAAGCACAACTCCAGAAAATCTAACTGATACTTCAAGTTGAGTACAGCACATTATTGTTTATTGATTCCGAATTTGGAATTATTAATCGTACAAAGATTGATCTATAATTGACTCCCCAAGCCAACTAATTAAAACAGGTATTTGTTAATCCCAAATAATCAGACTAACTTAGGAACCCAACAGAAATACAACTTAGATACGCATATATATGATATTTTTGTTTTTAATAGACAACATCATTTGACATGACGTTTGACTATTTATGTTATTAAAAATATATAAAAACTGTATCATTTATTATGATTTATTTTATTATTAAAGAGACTTAAAAGGATGATTTATATTTCTACATATTTGTACTAATTTTTTAAATAAGATAAATGATGAAACATAACGCTAGAAGTTAACAACGTTAGCTATTAATTAAAATGGAGAGTATATAATATTAATATCATTATTACTCCCTCTAATATTGAGTACTCAACAAGCAGATCGATCGTAAAATATTTGTGCAAAAGAACTTGAGACTTGTTAAGTATTAATAGAGATTTGCTCCAGTCCAATAAGATACCGGTACCTCACGATACCTAATCGTTTTCGATCGTTAGATCTAATAATGCTCATCTTGCCAGCTAGATCCAACGATCATAAACGTTTTGGTACCGTGAGGTACCGGTACCTTAAGGTATTTTTTATTGGACCAGAGAAAAATCGAATTACGTATTAATATCTTGTACATAATGTAGGTGAGATCCCGGCAGTTTGAGGAGATGCATACCTTCGACCGCAGAATTGCCAGCGCCGACAAGGCCCAAGCCAACGCCACCGCAGCAGAGCAGCATCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023637