Os06g0126000

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0126000| Description = Conserved hypothetical protein| Version = NM_001063190.1 GI:115466111 GeneID:4339967| Length = 6720 bp| Definition ...")
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Gene Name

Os06g0126000

Description

Conserved hypothetical protein

Version

NM_001063190.1 GI:115466111 GeneID:4339967

Length

6720 bp

Definition

Oryza sativa Japonica Group Os06g0126000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1388083..1394802

Sequence Coding Region

1388602..1389572,1390060..1390129,1390346..1390439,1390587..1390687,1391152..1391220
,1391328..1391542,1392193..1392241,1392611..1392739,1392825..1393294
,1393379..1393538

Expression

GEO Profiles:Os06g0126000

Genome Context

<gbrowseImage1> name=NC_008399:1388083..1394802 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1388083..1394802 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtagtatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgacggatgctaactcatcgctctccggaggtgcccagttgcagccaattattgatggtcccattgtgcaacaaagtcctccccaagagcagatgcagaagcgaaggtcttctagtgtaacatcacaacctgttattgatgctgctggtgcattgcatgctcagaagaagtcaagggttgatattaggcaagatgatatcctgcaacacaatttaatccagcaactgctccaaggccagagttctcttcatctgcagggtcaacagaaccctcagattcaagccttgatccatcagcataaactggcacagattcagcagcaacagcagcatcagatgttgcaaccattttcacagatccaacaatctcaagttggcatacctcggcagccacagttgaggcctccactagcgcagcctggaatgcagctagctggacctgttaggactcctgtcgagaatgggctttgttctcgaaggttaaagcaatacttataccataagcgtcaccgaccagagaataatccaataacatactggaggaagcttattgatgaatattttgcaccacgagcaagagaaagatggtgtgtatcctcgtatgagaaaagaggaaatccttcaggtgctgttccacacacagctccggattcatggcgctgtgacatttgtaatacacatgggggcaaaggatatgaggctacctatgaaatacttcctagactctgtcaaattagatttgaccatggtgttatagatgaatacttattccttgacatggccaatgaattccggttgcccaatggactaatgctgctggaacatactaaagttgttcagaaaagcatttatgaacatatgcatgtgatacacgaggggcagttgagaatcatattcacaccagaactgaagataatgtcctgggagttctgttcacggcgacatgatgagtatatcactcgcaggtttctttcaccccaggttgctcatctgctgcaagttgcccagaaatatcaaactgttgccactgaaagtggtccagctggggtctcaaacagtgatgcacagaacatttgcaacatgtttgtgacggcgtcacgacagctagcgaaaaatatagaccaccacaccttaaatgagcatggtctatctaaaagatatgttcgctgcttgcagatatcagaggtggtgaatcacatgaaagacctgattgaattcagccacaagaacaagcttggtcctatagagggtctgaagagctatcccaagcaaactgcagcaaaacttccagtacaaaacatgcacgagccaaagcaactaatggcagctgctggccttcctaatgaccagactaacctcaaagccatgggtgtcaaaacagaaatgaacacccatgcgaatgagacgcacggtattggaccaattggaaatggtccgcagaatgctgctgcacttaacaattaccagaatcccattggaaatggtctgcagaatgctgctgcacttaacaattaccagaatatccttagaagttcagtcgcaaaccagagtttgcttcagcaggaggcatcaagcatgtttaaaggtcccacagcaatgcacaatggcattcagctggaagcatctagatccttccgtggaccaaaccaggtgcatctcgcgcagttccaacatccggcctcatttcagcagcctatgcctcagcagagcagcctccagggcttgggtgtgagcccacaatatcagcagcatgtgctccatcagttgctgcaagaggccaagaacactaacaaccgtgtcttggcgcagcagcagcagcaacaacaacttcaacatgctcctgctaacagtggtcttgcatcaggaggaacggctatcaccggcagcgccgctagcggggatcatatgaataacaacggcgcggtgaagggtgggactccaatggttacaacaggtcctagcagtgtgatcaacaatacagccagcatcctccccagcagaagtaacagcttcaagtcagtgagcagcaacccccaagttgcagctgctgcgggcggcggcattggcagcggcggccatgcggctacccccaaggctgatgctctgcatgagttggatgatcttgacaatcttgggaatctgatcagtactgaactggaggagagtgggctgttcctgggtgaccaggcaggtggtggctactcatggaacatgtga</cdnaseq>

Protein Sequence

<aaseq>MSGAPCSNLGLVPRDMHGSIPISTTNSSGPSIGVSSLVTDANSS LSGGAQLQPIIDGPIVQQSPPQEQMQKRRSSSVTSQPVIDAAGALHAQKKSRVDIRQD DILQHNLIQQLLQGQSSLHLQGQQNPQIQALIHQHKLAQIQQQQQHQMLQPFSQIQQS QVGIPRQPQLRPPLAQPGMQLAGPVRTPVENGLCSRRLKQYLYHKRHRPENNPITYWR KLIDEYFAPRARERWCVSSYEKRGNPSGAVPHTAPDSWRCDICNTHGGKGYEATYEIL PRLCQIRFDHGVIDEYLFLDMANEFRLPNGLMLLEHTKVVQKSIYEHMHVIHEGQLRI IFTPELKIMSWEFCSRRHDEYITRRFLSPQVAHLLQVAQKYQTVATESGPAGVSNSDA QNICNMFVTASRQLAKNIDHHTLNEHGLSKRYVRCLQISEVVNHMKDLIEFSHKNKLG PIEGLKSYPKQTAAKLPVQNMHEPKQLMAAAGLPNDQTNLKAMGVKTEMNTHANETHG IGPIGNGPQNAAALNNYQNPIGNGLQNAAALNNYQNILRSSVANQSLLQQEASSMFKG PTAMHNGIQLEASRSFRGPNQVHLAQFQHPASFQQPMPQQSSLQGLGVSPQYQQHVLH QLLQEAKNTNNRVLAQQQQQQQLQHAPANSGLASGGTAITGSAASGDHMNNNGAVKGG TPMVTTGPSSVINNTASILPSRSNSFKSVSSNPQVAAAAGGGIGSGGHAATPKADALH ELDDLDNLGNLISTELEESGLFLGDQAGGGYSWNM</aaseq>

Gene Sequence

<dnaseqindica>5231..6201#4674..4743#4364..4457#4116..4216#3583..3651#3261..3475#2562..2610#2064..2192#1509..1978#1265..1424#gcctacaggcgcaggaagaggaggagaagaagcggaagaggagagaaaaaaaaaattcgcagcaaaaaagaaaaaaaaatcgcagctgcaaggtagaggaggagaagttggggtttgggagggccagcgattgagccgacgaactcaaggtgagagagatggtttggtagtgggggggggggggttgatggctcggaccgcgggaagtgacctaagtatttcttgtttttgctcccctttttggggggcgatttgtggttgggttgtgagaggaggggttgggtgattttttttttgggttgatgggtgccgattcctgcaatgtagcgtggtaattttgggggtgtagaggtggaatttctgttcttggtcgagtgttagcttaatctttgtagctcggtttttcgattggtttttggggggcgagtttgggctagggtttttatccatctgctacggagcaaagattaggggggaatttttctccttgtttcgtctcctgctcctctactttgctagggttggcgatccggctgcgggcacatctccggccttcgttgtcctctctctccatcctccccggacgtggcagtttcccctcccctcctctctcgattcgttgccctggagccttttgttgtgaagttagttcagtattctattttgtctgatgtgaacttgatttctatttcatttctttcgttgtttgatctgacctggaagacattttggtatatgctccattcttgtacttgtatgagaggaacctgggaaaaatatttttttttgtgtggtggaaagaatgctaaagctcggctaatttcaaccaaaagagtaaatttcagctcacaccctgcataaccagcatcaactgttttgcaatttgtgtttcatgctatattttctgtcccttattttcttttcaaagacgatttttttatttatttaccatttgttggattctagtttcattttctggttatgctattgcagtagcgtagtatggttagagaattgaaaaatggccttcttctgttttctgttttttcaaccattgaatcgagaaatttcatgatgctaaaatctcattactacttgcatctgtttggcttcagttactgctgaccatttctcagttctcacgcattaggctgttaacagttcttatccagtaagatatttgatgatttatttcctaataattcatgttcaccttttgcaggttcttcaaagtgatgattgggatcgaaccctggtaacctccatgtctggggcgccatgctccaaccttggacttgttcccagggatatgcatggtagtatccctattagcactacaaattcctctgggccaagcattggtgttagctctttggtgacggatgctaactcatcgctctccggaggtgcccagttgcagccaagtacgagcatgaatgctgattcattcatgcgccttcctgcttccccaatgtcgttttcatccaataacatctctggatcttcagttattgatggtcccattgtgcaacaaagtcctccccaagagcagatgcagaagcgaaggtcttctagtgtaacatcacaacctgttattgatgctgctggtgcattgcatgctcagaagaagtcaagggttgatattaggcaagatgatatcctgcaacacaatttaatccagcaactgctccaaggccagagttctcttcatctgcagggtcaacagaaccctcagattcaagccttgatccatcagcataaactggcacagattcagcagcaacagcagcatcagatgttgcaaccattttcacagatccaacaatctcaagttggcatacctcggcagccacagttgaggcctccactagcgcagcctggaatgcagctagctggacctgttaggactcctgtcgagaatgggctttgttctcgaaggttaaagcaatacttataccataagcgtcaccgaccagaggtgaggttctgcgttgtaaacatttattgcaagacacatgttcttggctataagatttactatttactggagtacctgcttgtagaataatccaataacatactggaggaagcttattgatgaatattttgcaccacgagcaagagaaagatggtgtgtatcctcgtatgagaaaagaggaaatccttcaggtgctgttccacacacagctccggtcagttcacggttcacacttaaatctttatatctgcattgtacattgacgccctttactttcctgtttcaacagaatacttctcagtgtgatgttcacaacaatattgattagcatctcttttaaactttgcttggatattgaacactatattttgacagtcaagtatcttgtgattgtagtgagaaacaaaatccatatgagcgtgttctatagatgaatattttgaaatagttagcattgcattttcattttttaatgatcgttctactgagagctgagatagctgatgctgttgagattttagtaaactgtgaagcataaattcgtagttgcaccttttaaattactattttctccatgtttcaggattcatggcgctgtgacatttgtaatacacatgggggcaaaggatatggttagttgactacttttttggaaccttatccagcttcattatcataacaatgaaccttgcaatttgctctgttcccactcctgtctttttttatggaagatcaattactgcactgttttgtgcctatagtacttttggtagataaactcaatattcctacatgtcttgtgctatagagattgcctcctcatctcaagacagaaaatgcaaatatataaaactgtattatcttgagtgtatctttcatatgagaaattagccatcacgagcaaaaaagaaagtatcctatgaagtttatatctcaagaggctttgtctgtcttgaatatacttggaatgattggtcagactggcagaaaatatttttcttgaaactacatggtgatatcctagtattgttatgtagttctggttctgcatttctgcatagtatatgttaccatatattgtgcagtttgcacctgccatttcttcaaaatgtacctcacaacatatttttccctggactactttgtattttgctccttttttaaagtactagtgtgttcttctcataagaagtcatgatcttttttgcttttttcattagttcagttccattgtatgatgttgatctcactttgttattattgtttcaatcttatctggcagaggctacctatgaaatacttcctagactctgtcaaattagatttgaccatggtgttatagatgaatacttattccttgacatggccaatgaattccggttgcccaatggactaatgctgctggaacatactaaagttgttcagaaaagcatttatgaacatatgcatgtgatacacgaggggcagttgagaatcatattcacaccagaactgaaggtaaaggcttatttgtaatagcttgcatttgtgaatatctagatgttgcaaatgattggacagtttaggatcattcttatctgctgttttcatgtgaaaatatgcagataatgtcctgggagttctgttcacggcgacatgatgagtatatcactcgcaggtttctttcaccccaggtagatttatgctgttctgttttatttgattaaactttgatcaatagagagcagatagtagattagctgctgtaatatacccaatacacctcttatgtgatagttgtcaacacgtatgtaagcaattttaataaagtggtttagttggatgaatattgcgaatcttggtaggctgggttgtaaaaagccccttctttttcctgctagactgctccaacatctatttagattcttgtttaattttccaatttatgtactggcttcctgagggctgcacatgcaaaaacacaagataatttcgaattttaagccatcttgaccgtccttgtctagtttttattttggtagtgctgtcctgatggtaaacatccctgttttttctgcacattttgatctctgccattctttggtgtactccaattttggtgacttggtatctcattgttcatatgtgctttttccaggttgctcatctgctgcaagttgcccagaaatatcaaactgttgccactgaaagtggtccagctggggtctcaaacagtgatgcacagaacatttgcaacatgttagtgagccaactatgccactagttccttgacatgcaattttaattcctcttctggcatgacaaatcatgattttttaaaaattccatctagagttttttttatttatgatctaattgatctcagcaccccattacgctctttaggtttgtgacggcgtcacgacagctagcgaaaaatatagaccaccacaccttaaatgagcatggtctatctaaaagatatgttcgctgcttgcaggtaagcatagcatttgtaggttatttaattatttttgtgatattatccataaagaagctcctgaattttctttagttattaatatctcgctgctaacagtatccatattttcacgagttctccttgtgttatttaacatttgctataatattatccagaatttcctgtaatatacttctgcacacagcatcttcattgaatttgtgtcctcttcagatatcagaggtggtgaatcacatgaaagacctgattgaattcagccacaagaacaagcttggtcctataggtatggtttatgcaaattcaccactcagttctctattgtttgactaggcgctcaatattatataatgaagttctccaggcagttttgcctgaccaatgttttgcatgaaaatggtaataagcataagcctagaagttcttttggtctgaagtgttgagagatattctattgtttggggaaaatgcttacagggctagatagtaaaagcatatccatggcaaaccaaatccaacatcatatacttgttgttatgatatcacttggtaaacatggtttttgaactagctatggtggtgtgtggttgccgtatggaaggattacctggtaaattattattattgttgctggatactagattataacagcataccaatttagataatacagtgataacagcgaagcagctgtttttccccctttttccctgtaaaattcagcaatttttttatgctttgaaatgtttaatgttttccctgttcatctgcagagggtctgaagagctatcccaagcaaactgcagcaaaacttccagtacaaaacatgcacgagccaaagcaactaatggcagctgctggccttcctaatgaccagactaacctcaaagccatgggtgtcaaaacagaaatgaacacccatgcgaatgagacgcacggtattggaccaattggaaatggtccgcagaatgctgctgcacttaacaattaccagaatcccattggaaatggtctgcagaatgctgctgcacttaacaattaccagaatatccttagaagttcagtcgcaaaccagagtttgcttcagcaggaggcatcaagcatgtttaaaggtcccacagcaatgcacaatggcattcagctggaagcatctagatccttccgtggaccaaaccaggtgcatctcgcgcagttccaacatccggcctcatttcagcagcctatgcctcagcagagcagcctccagggcttgggtgtgagcccacaatatcagcagcatgtgctccatcagttgctgcaagaggccaagaacactaacaaccgtgtcttggcgcagcagcagcagcaacaacaacttcaacatgctcctgctaacagtggtcttgcatcaggaggaacggctatcaccggcagcgccgctagcggggatcatatgaataacaacggcgcggtgaagggtgggactccaatggttacaacaggtcctagcagtgtgatcaacaatacagccagcatcctccccagcagaagtaacagcttcaagtcagtgagcagcaacccccaagttgcagctgctgcgggcggcggcattggcagcggcggccatgcggctacccccaaggctgatgctctgcatgagttggatgatcttgacaatcttgggaatctgatcagtactgaactggaggagagtgggctgttcctgggtgaccaggcaggtggtggctactcatggaacatgtgacaaatgcttgcctgcttggcttcttggtgatgatggaaactgccgtagattctagcttctcgtcttgttcttttttgttttgggtatgtggagtttttgtttggggtgtctgaaacagtttctgatgatgatgatacactgatgtaatttaagcgttatgtgcgctggtaagtgagttggcttggaatgctgagatcgaaccagagctgcttctgctagcacacatcgaggcccatcatactgctgaatgacaacgtctggcgattactattatttactttagtggtagtactattattttaatttttgtatctttataatgccatatgattgtcgattcagcgaagaaatttttatagtaggatttactccaaaatcctggaatggaaggattttgcacgagttttctgggatttgaaatagttcctgaaagaaaaaacccgcctgtaatctgctgtatacagagtttttgattttcgactatgtttaattcaggtcaggttggaagggttttattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0126000, RefSeq:Os06g0126000