Os06g0126100

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0126100| Description = Conserved hypothetical protein| Version = NM_001063191.1 GI:115466113 GeneID:4339968| Length = 3391 bp| Definition ...")
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Gene Name

Os06g0126100

Description

Conserved hypothetical protein

Version

NM_001063191.1 GI:115466113 GeneID:4339968

Length

3391 bp

Definition

Oryza sativa Japonica Group Os06g0126100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1397085..1400475

Sequence Coding Region

1397402..1400173

Expression

GEO Profiles:Os06g0126100

Genome Context

<gbrowseImage1> name=NC_008399:1397085..1400475 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1397085..1400475 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgctgagtccaatcaataatcggagatcacctccccttcatgtcggcgagctgcgcgaacatctcgccggcggcggtggtggacacgtcgggcacggtggagacgccggagccggaggaggtcgccggggccgcgccggcgccgtcgtggtcggctggcttgtcggccccctcgggcgggttggcgtcctgcagctggagcgcgtactcgaggttccagagcacgtcgcccatggagatcctgtcgctgccgaactcggcgaggcacttctcggcggcctcggcgaacttgttgagcgactcctggttcaccgtcccggcgagcttggggtccatgatcttctcgatgaggcccttccgcttccactgcatcccccactcggcgaggctgacctgctcgcgcggcagctgcgggtcgatgggcggccgcgcgcacagcgtctcgaggagcacgacgccgaaggagtagacgtcggacttgtccgtcagctgctggcaccggaagtactccgggtcgaggtagccgaagctgcccttgacggcggtgctgacgtgcagctggttcatcccggggccgtccttggacagcccaaagtcggatacctttgcgacgaagttgtcgtcgaggaggatgttggtggtcttgacgtcgcggtggatgatcccctgcgccgtgccggtgtgcaggtagtggaggccgcgggcggcgccgatgcagatctccagccgctgcttccacgtcaacgccggcaggtccttgccgtagatgtggtcgcggaaggggccattgtgcatgtactcgtagacgaggatcatctcggcgttctcgtcgcagtagccgatgagggagacgaggtggcggtggcggagcttggacagcatctggatctcggtgttgaactcgttgatcccttgctccgactgcgggttcccgcgcttcacggcgaccttggtgccgtcgtcgatctcgccgatgtagacgttgccgaagccgccgacgccgatgatggcgctctcctcgaagttcttggtcgcggcctggatctcggcgaaggagaagaagcggccgaggccgagggtggaggagaaggtgtagccgctcttgctggacccgcccttgctggtggtgaaggattggccggtgtggatggggagcagccacgacgagaagctgttccggcgctcccagtcctggggccgcttgtaccacttgacggccatggctcccaggccggcgaacgcgccgaacatcatcgcgaaccccaccgccgccacggccttgcggctgccgctgccgtcgtcggccttcttcccgtccacgccgaactcgccgtcgaggctccccaccgagttgctcatcttgagcacctccacgccgctgagcagcgcgtccacgcgccccgtgtcctcccccatcggccccacctggatgctcagcttgtccgtcgcgatcgacgagttgacgacgatgtccttgtagtacgccgccgacagctcgccggtcaccgtcgacaggtccagcccggagatggccttgcgcccgttgacgaacacgttgaagtagaggtcgttcatgctcttgctcacgatgtccgcgaagaagagccggaccaggtagccgaacgccgggtccacctccatcttccacgacatgttgaagctcgggctccccacgccggcgtccgccatcttcgcgcagctcgcgtacacctgcgccggcgccaccagcttcgacgtcccgtcggggaacttgatgttccccaccggcaccgacacgtccttcaccgcctccttcgactgcacgtacggcgcgtccacgtcccactgccgccccagcgtatccttgtcgggcgcgatggccgggccgccgacgttgatccggtacaccacctggtacgccgcctcggcgagcccggtcatctctccgacgggagcgatccccatggccatgtctgtgatgagctcgtcgggggcgttcacgacctcgatggcgttgatgaacgcggcggagcccttgagcgggtagaacttgacggcgaggtggttctcggtggcgttcacgaggaactccttcatgaccggcttgttctcggcggtgaagctgtggaggaggacgttggtgtcggtggagacggtgaaggtggcggtggtgaggtcgaagtcggagttcttgagcgggaagaggtagaggcggacgaagtgccagcccgggacggtgagcgggaagctgtagacggcctcgtcgcggaagatccgggcggtgaggtagagcggcgagggcacgtcggcgtcggtggtggcgaccttgatggcgtccttggcggagagaaggctgttcgactgcgcgtccgtcttgtacaccttgccgccggtggtgacggggctcgtgctgccgcagtcgatgaggaagttgtccttgggcgtgaacgtcgacggcgtcggcgccgtctgcgcgccgctctcggtgaccggccgcccctgccccgacacggccgtcgcgagcgccgccgccaccgcggcggccagcagcagcgccggcgggatcatcctcccgcggcggcgcatggtggtggggtggcctacgtggcacgcaagacgtggcagtgtattattggaggaggcgcgcggcgccctctcgccctctctctctggttggtggggccaatcggaggagagggaggagggggcgtggggccagggagtctagaagagggtggcggagaggtgggcgggttatgtgggccaatgagcgcgccaagtttagtttaa</cdnaseq>

Protein Sequence

<aaseq>MLLSPINNRRSPPLHVGELREHLAGGGGGHVGHGGDAGAGGGRR GRAGAVVVGWLVGPLGRVGVLQLERVLEVPEHVAHGDPVAAELGEALLGGLGELVERL LVHRPGELGVHDLLDEALPLPLHPPLGEADLLARQLRVDGRPRAQRLEEHDAEGVDVG LVRQLLAPEVLRVEVAEAALDGGADVQLVHPGAVLGQPKVGYLCDEVVVEEDVGGLDV AVDDPLRRAGVQVVEAAGGADADLQPLLPRQRRQVLAVDVVAEGAIVHVLVDEDHLGV LVAVADEGDEVAVAELGQHLDLGVELVDPLLRLRVPALHGDLGAVVDLADVDVAEAAD ADDGALLEVLGRGLDLGEGEEAAEAEGGGEGVAALAGPALAGGEGLAGVDGEQPRREA VPALPVLGPLVPLDGHGSQAGERAEHHREPHRRHGLAAAAAVVGLLPVHAELAVEAPH RVAHLEHLHAAEQRVHAPRVLPHRPHLDAQLVRRDRRVDDDVLVVRRRQLAGHRRQVQ PGDGLAPVDEHVEVEVVHALAHDVREEEPDQVAERRVHLHLPRHVEARAPHAGVRHLR AARVHLRRRHQLRRPVGELDVPHRHRHVLHRLLRLHVRRVHVPLPPQRILVGRDGRAA DVDPVHHLVRRLGEPGHLSDGSDPHGHVCDELVGGVHDLDGVDERGGALERVELDGEV VLGGVHEELLHDRLVLGGEAVEEDVGVGGDGEGGGGEVEVGVLEREEVEADEVPARDG EREAVDGLVAEDPGGEVERRGHVGVGGGDLDGVLGGEKAVRLRVRLVHLAAGGDGARA AAVDEEVVLGRERRRRRRRLRAALGDRPPLPRHGRRERRRHRGGQQQRRRDHPPAAAH GGGVAYVARKTWQCIIGGGARRPLALSLWLVGPIGGEGGGGVGPGSLEEGGGEVGGLC GPMSAPSLV</aaseq>

Gene Sequence

<dnaseqindica>318..3089#aatcaaccttgaccacccaaaaaaaagtcaaaaagaatccaatttgaagcgacacgtctcctagctaacaaaacgcagcagagagaagagtaacagtaacacaccatgaacacgtaggtacatttgcgttctgtatatatttacggaattttcaatttggtttctcgccatcgccaatccaagacactgcgaccggccatcttaaatcgggcaggaaatcgacaagtaattcgattttgatagctttcagtttacgttccaccgcgacgatcgatggattgatgatgaaataatctcgatcgatcactgcatcatgcatgctgctgagtccaatcaataatcggagatcacctccccttcatgtcggcgagctgcgcgaacatctcgccggcggcggtggtggacacgtcgggcacggtggagacgccggagccggaggaggtcgccggggccgcgccggcgccgtcgtggtcggctggcttgtcggccccctcgggcgggttggcgtcctgcagctggagcgcgtactcgaggttccagagcacgtcgcccatggagatcctgtcgctgccgaactcggcgaggcacttctcggcggcctcggcgaacttgttgagcgactcctggttcaccgtcccggcgagcttggggtccatgatcttctcgatgaggcccttccgcttccactgcatcccccactcggcgaggctgacctgctcgcgcggcagctgcgggtcgatgggcggccgcgcgcacagcgtctcgaggagcacgacgccgaaggagtagacgtcggacttgtccgtcagctgctggcaccggaagtactccgggtcgaggtagccgaagctgcccttgacggcggtgctgacgtgcagctggttcatcccggggccgtccttggacagcccaaagtcggatacctttgcgacgaagttgtcgtcgaggaggatgttggtggtcttgacgtcgcggtggatgatcccctgcgccgtgccggtgtgcaggtagtggaggccgcgggcggcgccgatgcagatctccagccgctgcttccacgtcaacgccggcaggtccttgccgtagatgtggtcgcggaaggggccattgtgcatgtactcgtagacgaggatcatctcggcgttctcgtcgcagtagccgatgagggagacgaggtggcggtggcggagcttggacagcatctggatctcggtgttgaactcgttgatcccttgctccgactgcgggttcccgcgcttcacggcgaccttggtgccgtcgtcgatctcgccgatgtagacgttgccgaagccgccgacgccgatgatggcgctctcctcgaagttcttggtcgcggcctggatctcggcgaaggagaagaagcggccgaggccgagggtggaggagaaggtgtagccgctcttgctggacccgcccttgctggtggtgaaggattggccggtgtggatggggagcagccacgacgagaagctgttccggcgctcccagtcctggggccgcttgtaccacttgacggccatggctcccaggccggcgaacgcgccgaacatcatcgcgaaccccaccgccgccacggccttgcggctgccgctgccgtcgtcggccttcttcccgtccacgccgaactcgccgtcgaggctccccaccgagttgctcatcttgagcacctccacgccgctgagcagcgcgtccacgcgccccgtgtcctcccccatcggccccacctggatgctcagcttgtccgtcgcgatcgacgagttgacgacgatgtccttgtagtacgccgccgacagctcgccggtcaccgtcgacaggtccagcccggagatggccttgcgcccgttgacgaacacgttgaagtagaggtcgttcatgctcttgctcacgatgtccgcgaagaagagccggaccaggtagccgaacgccgggtccacctccatcttccacgacatgttgaagctcgggctccccacgccggcgtccgccatcttcgcgcagctcgcgtacacctgcgccggcgccaccagcttcgacgtcccgtcggggaacttgatgttccccaccggcaccgacacgtccttcaccgcctccttcgactgcacgtacggcgcgtccacgtcccactgccgccccagcgtatccttgtcgggcgcgatggccgggccgccgacgttgatccggtacaccacctggtacgccgcctcggcgagcccggtcatctctccgacgggagcgatccccatggccatgtctgtgatgagctcgtcgggggcgttcacgacctcgatggcgttgatgaacgcggcggagcccttgagcgggtagaacttgacggcgaggtggttctcggtggcgttcacgaggaactccttcatgaccggcttgttctcggcggtgaagctgtggaggaggacgttggtgtcggtggagacggtgaaggtggcggtggtgaggtcgaagtcggagttcttgagcgggaagaggtagaggcggacgaagtgccagcccgggacggtgagcgggaagctgtagacggcctcgtcgcggaagatccgggcggtgaggtagagcggcgagggcacgtcggcgtcggtggtggcgaccttgatggcgtccttggcggagagaaggctgttcgactgcgcgtccgtcttgtacaccttgccgccggtggtgacggggctcgtgctgccgcagtcgatgaggaagttgtccttgggcgtgaacgtcgacggcgtcggcgccgtctgcgcgccgctctcggtgaccggccgcccctgccccgacacggccgtcgcgagcgccgccgccaccgcggcggccagcagcagcgccggcgggatcatcctcccgcggcggcgcatggtggtggggtggcctacgtggcacgcaagacgtggcagtgtattattggaggaggcgcgcggcgccctctcgccctctctctctggttggtggggccaatcggaggagagggaggagggggcgtggggccagggagtctagaagagggtggcggagaggtgggcgggttatgtgggccaatgagcgcgccaagtttagtttaagcaggccgcccctacggttgggcccgcctcgcgcgctccaccgctcgcaaattctcgcatacgcgcgccgcgtcggccgcctattcttagcacgcgacggcttcgttcgattgcaggtggaggagcaagatttgtaccgcacacgaaatctaatttgcaggtggaggcaactccggctcggacgtccgacgtttggggaaaaatcgggcgctgatgtcagcgcccgatttacgtgcaaaaactactttaaattaatttttctcttaaattacttatctaaatcatgattcgatttcaccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0126100, RefSeq:Os06g0126100