BGIOSGA023743

From RiceWiki
Revision as of 16:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023743

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023743, complete gene.

LocusTag

P0625E02.115

Ensembl Transcript ID

BGIOSGA023743-TA

Ensembl Protein ID

BGIOSGA023743-PA

Length

2858

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26245999..26248856

Sequence Coding Region

26248751..26248856,26247791..26247990,26247490..26247679,26246685..26247076,26245999..26246550

Genome Context

<gbrowseImage1> name=IndicaChromosome07:26245999..26248856 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:26245999..26248856 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTGCTTCCCGTGCTCGGGGTCGTCGGGGAAGGGCGGGGTTGACGCCAAGAGCGTGGCGGCGCTCTCGCCGGGTCCGCGGCCCGCGGCGAGCGCGGCACCAGATCGATCAAACTCATCACGTGGTTCAGGCATTAAGAAGGACGATTCTGTCCGAAGAGGAGGAAGCTCTGCGAATGATGGTCCAGCCAAAATTTTCACTTTCCGAGAATTGGCTGTTGCCACCAAGAATTTCAGAAAAGACTGCCTGCTGGGTGAAGGTGGCTTTGGTCGTGTCTATAAAGGACAGATGGAGAATGGACAGGTTATTGCCGTGAAGCAACTTGACAGAAATGGCCTACAAGGAAACCGAGAATTTCTCGTGGAGGTTCTCATGCTAAGTCTCTTGCACCATCCTAATCTGGTCAGATTAATTGGCTACTGCGCAGATGGTGACCAGCGGCTCCTAGTTTATGAGTATATGCTATTGGGGTCACTAGAAAACCATCTTCATGATCGCCCACCAGGCAAGAAACCTCTTGACTGGAATGCAAGGATGAAGATTGCTGTTGGTGCAGCGAAGGGTTTGGAGTACCTGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTTCAAATCATCAAATATTCTTCTGGGCGAAGACTATTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAAAGCCATTGATCACACCCAACCTGCAGGGGAGCAAAATCTTGTTGCATGGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGCACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGTTCCTGATGCCCAACATGCTGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAGCAGGATCACAGTGAAGGTTATGGCAGTGGCAGTAGCTCTGGAAGGAATGATGGTCTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAGTGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSCFPCSGSSGKGGVDAKSVAALSPGPRPAASAAPDRSNSSRGSGIKKDDSVRRGGSSANDGPAKIFTFRELAVATKNFRKDCLLGEGGFGRVYKGQMENGQVIAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVRLIGYCADGDQRLLVYEYMLLGSLENHLHDRPPGKKPLDWNARMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLGEDYYPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDHTQPAGEQNLVAWARPLFRDRRKFCQMADPSLQGCYPKRGLYQALAVASMCLQENATSRPLIADIVTALSYLASNHYDPNAPSAKSSRTCPSTPKAKAHRRTTSVPDAQHAADSLNWNFPDLGRKETTRGEFEQDHSEGYGSGSSSGRNDGLDVPELLALHNGQNNSEADIYHKSSVKLDAHEKQRSGSGKGSRQF</aaseq>

Gene Sequence

<dnaseqindica>1..106#867..1066#1178..1367#1781..2172#2307..2858#ATGAGCTGCTTCCCGTGCTCGGGGTCGTCGGGGAAGGGCGGGGTTGACGCCAAGAGCGTGGCGGCGCTCTCGCCGGGTCCGCGGCCCGCGGCGAGCGCGGCACCAGGTGAATCCCGCATCTTAGCCCCCCTCCGATTTCTCTTCGCAGGGTGTGGAAAGATTCGATTTCTTCTGGTGAATCCGCTTGCTGGCGTTGCCCCGGTCAGCTGTATGATTCTGTATCGGTTTCGCTGGTTGCGAATTTGCAGCGAGTGGCTCAGTGCGGTAGCTGCGCATTGGTGTGATCCATATTGGCTCGAATTCTCTCTTCGTTTGGGTTTAAAGGGTAACAGTGAGAAAAAAGAAGTCAATTTTGCATAGCGTTGATTGTTTATTATGCTTTCTTGCAAATTGGCGCTTTGGTCATTTGATTGTGGTAAATAATTCAAGGCTTTAGGTTTGTAAATGTTAGTCTGGTTGCTTGTTGAGATAGTGGGGTTGAAGGGGACGCAAAGCTACTTTCTTGGAAAGAAAATGTAATTGATTGTTCTCGTGAGAAGTGGAGTGAAAGGGAGAGGAAAATAAAATCTGAACTGAAGCTTGCAGCTATAATAATAATATTATTGCAACTTTCAGTCTCAGGCGACCAGGCAGTAATGTTTGATGTGTTGTTTACTCTTGTTGTCTCTAACTGATTCCTTCGCGTGGGTAATTGCTTGCTTCGACCTTGCTTGAATTACAGTCCACCCTTTGCATAGTTGTTGTAGTCTGAAGCGAGTACAGTAATTTAGTTGCCGTGTTGCTGCGCATGCAAGTATTATCATTCTCTCATGAGATCATTGAATTGAGGAATAATATGTTAAAATTTGCATGTTGGATGGGTCAAGATCGATCAAACTCATCACGTGGTTCAGGCATTAAGAAGGACGATTCTGTCCGAAGAGGAGGAAGCTCTGCGAATGATGGTCCAGCCAAAATTTTCACTTTCCGAGAATTGGCTGTTGCCACCAAGAATTTCAGAAAAGACTGCCTGCTGGGTGAAGGTGGCTTTGGTCGTGTCTATAAAGGACAGATGGAGAATGGACAGGTTTGCTATTCCTAACATTGGCTGCTGTGTGCTCTTGTTCATTAGCTGCAATTTAGAGCATGATTTTTCTGAGTGTCCGACACCTTTTCTTTTGCATATATCATCTAGCAGGTTATTGCCGTGAAGCAACTTGACAGAAATGGCCTACAAGGAAACCGAGAATTTCTCGTGGAGGTTCTCATGCTAAGTCTCTTGCACCATCCTAATCTGGTCAGATTAATTGGCTACTGCGCAGATGGTGACCAGCGGCTCCTAGTTTATGAGTATATGCTATTGGGGTCACTAGAAAACCATCTTCATGGTAAGCTTCTCAGTTCTCACTACGTGATTTTACTGTTTCAGTTCAAAGTTTGCACATTATCAATAACACTTAGTTGATTGAGCTTCACATAACATACAGAAGAAGAATTGTGAATTTCGTGACATAATGGGAAACATTAATGTTTAAGTTCAGAGACACTAAAACACACCTCCTGAAATGTCAATGCACATTAAATTGATAGTGATCAAGTTATGTCCTTATGGTTCCTATCACAAGATTTGTGTTTGTGCTTTAGTCTCAACCTGCTAAGTTGATTCCTGACCTATTTGATTTGAAAGAGAACTTGCCAGCTACCCTTCACTGTCTTACTGTAGTTTGCTACTGACAACATTTAATTTTCTTTAGACATTGCTATCTATCATTTTATAACTCATGGGGCACTTTCTTAATAGATCGCCCACCAGGCAAGAAACCTCTTGACTGGAATGCAAGGATGAAGATTGCTGTTGGTGCAGCGAAGGGTTTGGAGTACCTGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTTCAAATCATCAAATATTCTTCTGGGCGAAGACTATTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAAAGCCATTGATCACACCCAACCTGCAGGGGAGCAAAATCTTGTTGCATGGGTAGGTTCATCCTTTTATTTTTAAGAATGTGTGGGCTCAACTGTACTAAATTATCTCCCTTCCTTTGGGTGTAGAGGGGATGTTCTGTTTCAATTTCATCATGATGTGAAGTGTCTTATCCTTATAATTTGCAGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGCACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGTTCCTGATGCCCAACATGCTGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAGCAGGATCACAGTGAAGGTTATGGCAGTGGCAGTAGCTCTGGAAGGAATGATGGTCTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAGTGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023743