Os06g0127800

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0127800| Description = GRAS transcription factor domain containing protein| Version = NM_001063202.1 GI:115466135 GeneID:4339980| Length = ...")
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Gene Name

Os06g0127800

Description

GRAS transcription factor domain containing protein

Version

NM_001063202.1 GI:115466135 GeneID:4339980

Length

3084 bp

Definition

Oryza sativa Japonica Group Os06g0127800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1464501..1467584

Sequence Coding Region

1464961..1466814

Expression

GEO Profiles:Os06g0127800

Genome Context

<gbrowseImage1> name=NC_008399:1464501..1467584 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1464501..1467584 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttggcgggttgctcgttctcgtcgtcgaggcatcagatgagcaccgcgcagcgtttcgacatcctcccctgcggcttctccaagcgcggcagccgcggcgacggcgccgccccgcgggtcgccggcgacgccaggagcggcgccaccacctgctccttccggacgcaccccgcgccgccggtcacccagtccgtgtcctggggcgccaagccggagcccggcggcaatggcaatggcgcccaccgcgccgttaagcgggcgcatgacgaggacgcggtcgaggagtatggccccattgttcgcgccaagcggacgcggatgggcggcgacggcgatgaggtatggttccatcaatccattgcagggacgatgcaagcgacggcggcgggagaaggagaggaggcggaggaggagaaggtcttcttggtgccgagcgcggcggcgttcccgcacggcatggccgccgcggggccatcgctggccgcggccaagaaggaggagtacagcaagtcgccgtccgactcgtcgtcctcgtcgggcacggacggcggctcgtcggcgatgatgccgccgccgcagccgcccgagttcgacgcgaggaacggcgtgccggcgccggggcaggcggagcgggaggcgctggagctggtgcgcgcgctcaccgcgtgcgccgactccctctccgccggcaaccacgaggccgccaactactacctggcccggctcggcgagatggcctcgccggcggggcccacgccgatgcaccgcgtggccgcctacttcaccgaggcgctcgcgctccgcgtcgtgcgcatgtggccgcacatgttcgacatcggcccgccgcgggagctcaccgacgacgccttcggcggcggcgacgacgacgccatggcgctgcggatactcaacgccatcacgcccatcccgaggttcctgcacttcacgctcaacgagcgcctcctccgcgagttcgaggggcacgagcgcgtccacgtcatcgacttcgacatcaagcaggggctccaatggccgggcttgctccagagcctggccgcgcgggcggtgcctccggcgcacgtgcggatcaccggagtcggcgagtcgaggcaggagctgcaggagacgggagcgcggctggcgcgcgtcgccgccgcgctcggcctggcgttcgagttccacgccgtggtcgaccggctcgaggacgtccgcctgtggatgctccacgtcaagcgcggcgagtgcgtggccgtgaactgcgtcctcgccatgcaccgcctgctccgcgacgacgccgcgctgaccgacttcctggggctagcgcgcagcacgggcgccaccatcctcctcctcggcgagcacgagggcggcggcctcaactcggggaggtgggaggcgcggttcgcgcgcgcgctgcggtactacgccgcggcgttcgacgcggtggacgcggcggggctgccggaggcgagccccgcgagggccaaggcggaggagatgttcgcgcgggagatccgcaacgcggtggcgttcgagggccccgagcggttcgagcgccacgagagcttcgccgggtggcggcggcgcatggaggacggcggcgggttcaagaacgccggcatcggcgagcgcgaggcgatgcaggggcgcatgatcgcgaggatgttcgggccggacaagtacaccgtgcaggcgcacggcggcggcggcagcggcggcggcgaggcgctcacgctccggtggctggaccagccgctgtacaccgtgacggcgtggacgccggcgggcgacggcgcgggaggcagcaccgtgtcggcgtccacaacagcatcacattctcagcaaagctaa</cdnaseq>

Protein Sequence

<aaseq>MLAGCSFSSSRHQMSTAQRFDILPCGFSKRGSRGDGAAPRVAGD ARSGATTCSFRTHPAPPVTQSVSWGAKPEPGGNGNGAHRAVKRAHDEDAVEEYGPIVR AKRTRMGGDGDEVWFHQSIAGTMQATAAGEGEEAEEEKVFLVPSAAAFPHGMAAAGPS LAAAKKEEYSKSPSDSSSSSGTDGGSSAMMPPPQPPEFDARNGVPAPGQAEREALELV RALTACADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPH MFDIGPPRELTDDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHV IDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAF EFHAVVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTDFLGLARSTGATIL LLGEHEGGGLNSGRWEARFARALRYYAAAFDAVDAAGLPEASPARAKAEEMFAREIRN AVAFEGPERFERHESFAGWRRRMEDGGGFKNAGIGEREAMQGRMIARMFGPDKYTVQA HGGGGSGGGEALTLRWLDQPLYTVTAWTPAGDGAGGSTVSASTTASHSQQS</aaseq>

Gene Sequence

<dnaseqindica>771..2624#gagtgagagtgagagagtgagagcagagaccaccaccaccggagaggttagtgagagaggagtggtaatggtgaggcaacaagagtaggttccatttcatatcatcactaggatagcgtagtttgtaggctgcatctccatctccatcgccattgattcgcattgcatccatcattttaggatgttctactagggttcttgatttttcttttggtttgttgttttgacgaatggaggtattgttgggattcgccgcctgctgctcgtcgtcgtcgtcgccgatgaggaggccgtgcgggctctgccccggcatgtccgatcgttcgtgatttgttttttctacatgttttagggcccatttgttcttgatcctattctttgattcttttgtactaagcattctaaggcgaagccacccattctttcctgcatatatacttacaaacacatagcccccatctgatctcacaaacattatttctctctctttttttctcagttttttctttgttgatttactgaccaaattctttggaagaacaacaagatcatctggtttttatctgctcattcttttgtacatcgaatcatatacatttccattccaccaaagccttagccagataccacagagagagtgtgagagaaatcagagtgagaaacagaggaggaagaagaagaagaagacgaggaggaggaggaggaggagcaggaggaggaggaggtctcttcttggcacgtcgcgttccggcgagtgacgtgtctccgggatgttggcgggttgctcgttctcgtcgtcgaggcatcagatgagcaccgcgcagcgtttcgacatcctcccctgcggcttctccaagcgcggcagccgcggcgacggcgccgccccgcgggtcgccggcgacgccaggagcggcgccaccacctgctccttccggacgcaccccgcgccgccggtcacccagtccgtgtcctggggcgccaagccggagcccggcggcaatggcaatggcgcccaccgcgccgttaagcgggcgcatgacgaggacgcggtcgaggagtatggccccattgttcgcgccaagcggacgcggatgggcggcgacggcgatgaggtatggttccatcaatccattgcagggacgatgcaagcgacggcggcgggagaaggagaggaggcggaggaggagaaggtcttcttggtgccgagcgcggcggcgttcccgcacggcatggccgccgcggggccatcgctggccgcggccaagaaggaggagtacagcaagtcgccgtccgactcgtcgtcctcgtcgggcacggacggcggctcgtcggcgatgatgccgccgccgcagccgcccgagttcgacgcgaggaacggcgtgccggcgccggggcaggcggagcgggaggcgctggagctggtgcgcgcgctcaccgcgtgcgccgactccctctccgccggcaaccacgaggccgccaactactacctggcccggctcggcgagatggcctcgccggcggggcccacgccgatgcaccgcgtggccgcctacttcaccgaggcgctcgcgctccgcgtcgtgcgcatgtggccgcacatgttcgacatcggcccgccgcgggagctcaccgacgacgccttcggcggcggcgacgacgacgccatggcgctgcggatactcaacgccatcacgcccatcccgaggttcctgcacttcacgctcaacgagcgcctcctccgcgagttcgaggggcacgagcgcgtccacgtcatcgacttcgacatcaagcaggggctccaatggccgggcttgctccagagcctggccgcgcgggcggtgcctccggcgcacgtgcggatcaccggagtcggcgagtcgaggcaggagctgcaggagacgggagcgcggctggcgcgcgtcgccgccgcgctcggcctggcgttcgagttccacgccgtggtcgaccggctcgaggacgtccgcctgtggatgctccacgtcaagcgcggcgagtgcgtggccgtgaactgcgtcctcgccatgcaccgcctgctccgcgacgacgccgcgctgaccgacttcctggggctagcgcgcagcacgggcgccaccatcctcctcctcggcgagcacgagggcggcggcctcaactcggggaggtgggaggcgcggttcgcgcgcgcgctgcggtactacgccgcggcgttcgacgcggtggacgcggcggggctgccggaggcgagccccgcgagggccaaggcggaggagatgttcgcgcgggagatccgcaacgcggtggcgttcgagggccccgagcggttcgagcgccacgagagcttcgccgggtggcggcggcgcatggaggacggcggcgggttcaagaacgccggcatcggcgagcgcgaggcgatgcaggggcgcatgatcgcgaggatgttcgggccggacaagtacaccgtgcaggcgcacggcggcggcggcagcggcggcggcgaggcgctcacgctccggtggctggaccagccgctgtacaccgtgacggcgtggacgccggcgggcgacggcgcgggaggcagcaccgtgtcggcgtccacaacagcatcacattctcagcaaagctaagctgacgatgaatggtgattaggtgaagagaaagaaagaacaaagcctttttttacagtgcttcttttgttaatgatgattagttcatacagtatgacaattcttttatacattcagagaaaagaaagaagaaagaaaggtgtagttttttgttttatagattgataggtggaaagattcaattaaatcaaattcaattcaatttttagattgtaattctttataaatattcttttggctgttgagagagagtcccctgcaaaatgtagctgcatgtagaagaaagaaagcaaagaagcagtagatagattagcaggggcagcatctctcacagtcactattagtgtctccggctgttattatacaacattattattacaatcaaattctttcatcattcattctacatgtaatctctgttcagaatcagaatgaaatgaaacatgtgttatatttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0127800, RefSeq:Os06g0127800