Os06g0129300

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0129300| Description = Armadillo-like helical domain containing protein| Version = NM_001063215.1 GI:115466161 GeneID:4339993| Length = 357...")
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Gene Name

Os06g0129300

Description

Armadillo-like helical domain containing protein

Version

NM_001063215.1 GI:115466161 GeneID:4339993

Length

3579 bp

Definition

Oryza sativa Japonica Group Os06g0129300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1546060..1549638

Sequence Coding Region

1546436..1546652,1547128..1547201,1547486..1547584,1548217..1548422,1549256..1549568

Expression

GEO Profiles:Os06g0129300

Genome Context

<gbrowseImage1> name=NC_008399:1546060..1549638 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1546060..1549638 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagccggaaggaggtggtggtggcggcggctggagggggcgcgggtgcggaatcgggagcggagggatcttcatctgcgggaagcagcggcggcggcggggagctcgcggaggcgctggcgcggcggcggctgtaccgggaggtgacgctggcgctgcgcacggggctgcgcgacgccaaggccgacttctccttcctccgcgcgcgggggctccgcagcctcctcggcttcctccgctccaccgcctccgccaccgacgactcgcagctgctcctcttccggcattcccagtctatccccgatctccaagttattcctgttctctttcagaactcattgcatcaaccaaaggaagatcctgttgtgaccttggatcatatatttggagtagaaccaatgaagattacaagccccccaacagataatgaaattgctctcgctcttagagtcttggaaggatgttgccttttgtatagccgatgcactgctctggcacacaagtacaaggctgtgaaggtaatcctgaatatattagctaaccgaggtccagctgagcaaggagtgtgcttggacgcgctgatatcgttgatgttggattcaccccccaatcagatggatttcgaggaattcagtggacttgagaaggttgcagagcttttaaaggatgtgcaagtagaagagcacataagattgaaatgtggggagttcctactattgctaattgggcatgtttatgcgaaagaaaactctcccatacacgaacaaatgagaattttgttcggcgagcagtgcgcatcactgatatgggcagcaagtcggtttggctccactctcgacgtggagcagaggcagatggccttgcaaatacaagcaaggagagttgttgaatccttggagccctactaa</cdnaseq>

Protein Sequence

<aaseq>MSRKEVVVAAAGGGAGAESGAEGSSSAGSSGGGGELAEALARRR LYREVTLALRTGLRDAKADFSFLRARGLRSLLGFLRSTASATDDSQLLLFRHSQSIPD LQVIPVLFQNSLHQPKEDPVVTLDHIFGVEPMKITSPPTDNEIALALRVLEGCCLLYS RCTALAHKYKAVKVILNILANRGPAEQGVCLDALISLMLDSPPNQMDFEEFSGLEKVA ELLKDVQVEEHIRLKCGEFLLLLIGHVYAKENSPIHEQMRILFGEQCASLIWAASRFG STLDVEQRQMALQIQARRVVESLEPY</aaseq>

Gene Sequence

<dnaseqindica>2987..3203#2438..2511#2055..2153#1217..1422#71..383#gggagctgtagagaagagagagaagagagagagagagaggcgacatcgccggcggcgagaggcggcggggatgagccggaaggaggtggtggtggcggcggctggagggggcgcgggtgcggaatcgggagcggagggatcttcatctgcgggaagcagcggcggcggcggggagctcgcggaggcgctggcgcggcggcggctgtaccgggaggtgacgctggcgctgcgcacggggctgcgcgacgccaaggccgacttctccttcctccgcgcgcgggggctccgcagcctcctcggcttcctccgctccaccgcctccgccaccgacgactcgcagctgctcctcttccggcattcccagtctatccccgatctccaaggtacaaaccgattttcccatccattccggcgatccaacgatagggcaccgggttgttctcgtgattctcatccggcgccgtaattggagcgacatttggttggcctgatctctaatgcaatgcaatatccagtggtggttagaatgaaatcgatgaacatagttactgtcttgccacaatcggcacaaatttaagatgagagcatcgagtaaacctatttgttattagatgtaacatgtcagtcagaacacaagattcagtattaggtgataagcgctgattgagctggtttagtttggtgctgcacaaaacttggttcattataaatgaaacaagtgctcttggtggtatgtgtttattatatcgatgctaatgctttctacttctcttcgtgatgcatttatggggagagctaacctcataacggtaccttgataatctctttccgagttacgtatgtcagtaagccaagtaaaagcttatatttgctttagcccatattgaggctatcaacaagaacttggaaaaatcgccctactaatgaattgcaagtttaaaatggattatgttggacttgcttgtggtcaaaatatgtattttgtattggatcttcctcagttgaatgattgttgtagcatctagcatagttagctgagtaattcagtagaacaatattacagtgaggtctttttcccctgattacagtataattttttccctcaggtttgtaacttgatcaagaacttgtgatgctcatgcattttgttggatatacttcttgtatgtatacctgagaaaggagcaggaactgacgagctggtgttctgtgacagttattcctgttctctttcagaactcattgcatcaaccaaaggaagatcctgttgtgaccttggatcatatatttggagtagaaccaatgaagattacaagccccccaacagataatgaaattgctctcgctcttagagtcttggaaggatgttgccttttgtatagccgatgcactgctctggcacacaagtacaaggctgtgaaggtaatatccaattatctgtagtgcttgctttgttctaagacatctgttttatgcttgatggtttaattaggccattcccaacccaagacattagacatagtttccataaactccacatcatcaagaaactagtactagacactactcttccaatgcaaacaccactattccatacttaaatttaatgatacctatctcacttgatgtcttggatgttgtgtagaaaccatgtctcatgcaagacatggtttccttctctttcctcatttatttacttgtcatattatttttcatcctaggtggcagcttatttaatgctatggacaccatcctagtcattgggttgggaatggccttatgtttgttaaatcatactggctagaagttttttttttttttggtctcactcagatggtaatctgttgatcatgcaatttatttatcgcatagccgtagcgtcaaatcgttagttctatattgtatatcactgtcaagaagttcctgttctctgtggttgcggattctttcttcgagcataaatcattgctcaatatggtaccatctgctcatgtgatttttgtcctgtcccatatattcttcgcttgattagctaaaacctttattttctataggtaatcctgaatatattagctaaccgaggtccagctgagcaaggagtgtgcttggacgcgctgatatcgttgatgttggattcaccccccaatcagatggtgctgttacctctttacctaattgttatgattctcttaaaatcttttacatgttagtttttttttctattacattacttagggttagtgtacaattacttgacataagagaaatataaacatcaggtttatttcagaacaaaatgaataagacttactcttagtttgaaaggacattgagcattaaataagttgacatagtttattgtttctgtttcctatcattttttgtgctcttcagttggtccaaggctcacattgtatataacttcttccttatctaggatttcgaggaattcagtggacttgagaaggttgcagagcttttaaaggatgtgcaagtagaagagcacataaggcacgtattattcctttaagcatttctttagtctgaatgcataatctggcagttcaaaccaaattttactctctccctccctgttgaagaaaaccaaattttactcttcatgtgtctgatggattgatctgtccgtatctcatcaatcaattggaaaaacagaaagttaaacaaacgagccatgcaacctactagcttggtgacaacatgccctcaaaactattgatatctgaagtttttagctgttgacctctactcctagtctttgttttagcaaggtttgtgtgctaaccttaatattacatcctgacttactatgtgatattagctttactgttctggggtcctaattttgatgatcaaaatcttgagtctataactccactactaacagagtcaattgcacatttgtttctccaaattgtttgttcgtttttggattaacctacttttgttgaatgatgctttgatgcagattgaaatgtggggagttcctactattgctaattgggcatgtttatgcgaaagaaaactctcccatacacgaacaaatgagaattttgttcggcgagcagtgcgcatcactgatatgggcagcaagtcggtttggctccactctcgacgtggagcagaggcagatggccttgcaaatacaagcaaggagagttgttgaatccttggagccctactaagacaaagcacatcaatgcgttctttttgtcttcctgacaatggtctgatatcactgatccaagcaatgtgcttcatttgcctatagcaaagctttgttgtcatattttctgtgtagagccattcttatgtttctgtatgtacaaactttgttgaaaatattctattagttcagctttgcagaaaagatgttattagtttccattcgaaaaccatggactaggttacggtggtaacttagggcttgtagtggttccccattttgtaaaccgtgggtttaatacgaaatttgcctacaaattgccttttatgcttcaacagcaatattggcaacagtttcattgaaacagaggaaatcccctccaattgggaaatact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0129300, RefSeq:Os06g0129300