Os06g0129900

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0129900| Description = Similar to Cytochrome P450 CYPD| Version = NM_001063220.1 GI:115466171 GeneID:4339998| Length = 3748 bp| Definition...")
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Gene Name

Os06g0129900

Description

Similar to Cytochrome P450 CYPD

Version

NM_001063220.1 GI:115466171 GeneID:4339998

Length

3748 bp

Definition

Oryza sativa Japonica Group Os06g0129900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1580992..1584739

Sequence Coding Region

1581327..1581518,1581891..1582091,1582628..1582966,1583274..1583558,1583769..1583984
,1584395..1584739

Expression

GEO Profiles:Os06g0129900

Genome Context

<gbrowseImage1> name=NC_008399:1580992..1584739 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1580992..1584739 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttacccagctcacctacctagctgcatcagcaggagtgtgcttggcttcagctctagccatcgccttgctgtccatcgccctctacatcatcggcgtcgtcgcctccttcgccgtcctctgcgccaaggagttcgccgagagagcccacgaccggccgccgctcgtcggaacagttttccggcagctcaagaacttcgacagaatgttcgatgaacatgtcaactatgcaaccgcgcatcgcaccagcaggattgtgtatcccggtcactgcgaggtctttacttctgatccggccgtcgttgagcatgtcctcaagaacagcttcagtaaatacagcaagggggacttcctcactacagccatgaaggatctctttggagatggaatttttgcaacagatggggatatgtggcgtcatcagaggaagctagcgagctacgaattctcaaccaaagtgttacgtgacttcagcagtgacacattcagaaggaatgctgcaaaactggcagagaagatctcatgtgcagcagctaacagaattagcataaatattcaggatcttttgatgagagcaactatggactcaatctttaaagtggggtttggttttgagctcaacacactatctggatcagatgaatctggcattcaattcagcaaggcctttgatgaggcaaactcccttgtttactaccgatttgttgacataatgtggaaactgaaaaggtatcttaacattggatcagaagccaaactcaagaggaacattcagatcatcgacagctttgtgatgaaactgatccatcagaagagagagcaaatgaagattgcagctgactataaaaccaaagaggacatcctatcaagatttgtactagcaagtgagcaagatcctggaacaatggatgaccgctacttgcgtgacatagtcctcaacttcctgatagctgggaaagacaccacaggaaatacccttacctggttcttctacctgctatgcaagaaccccatagtgcaggataaggttgcccttgaaatcagagagtttgttgaatggagcaaggaagataacactattgaaagcttcaccaaacgactggacgaaggtgcaattagcaaaatgcactacctccaggctacaatttccgagacactccggctatatcctgctgtcccagtggatgctaagatggcagacgaggatgatgtactaccaaatggctatagagtggtaaaaggagatggaattaactacatgatttatgccatggggaggatgacatacctttggggtgaggatgcacaggagttcaggcctgaaagatggcttgtgaatggagtttatcagcaagagagcccgttcaagtttgtgtctttcaatgctgggccacgtatctgcttggggaaagaatttgcacacaggcagatgaagatcatggctgctaccctgatacatttcttcaagttcagactggaagatgaatccaaggagccaatctataaaacaatgttcactctccatatcgacaatggtctccatctgcttgcaaaccctcgagaaatttcaccatga</cdnaseq>

Protein Sequence

<aaseq>MVTQLTYLAASAGVCLASALAIALLSIALYIIGVVASFAVLCAK EFAERAHDRPPLVGTVFRQLKNFDRMFDEHVNYATAHRTSRIVYPGHCEVFTSDPAVV EHVLKNSFSKYSKGDFLTTAMKDLFGDGIFATDGDMWRHQRKLASYEFSTKVLRDFSS DTFRRNAAKLAEKISCAAANRISINIQDLLMRATMDSIFKVGFGFELNTLSGSDESGI QFSKAFDEANSLVYYRFVDIMWKLKRYLNIGSEAKLKRNIQIIDSFVMKLIHQKREQM KIAADYKTKEDILSRFVLASEQDPGTMDDRYLRDIVLNFLIAGKDTTGNTLTWFFYLL CKNPIVQDKVALEIREFVEWSKEDNTIESFTKRLDEGAISKMHYLQATISETLRLYPA VPVDAKMADEDDVLPNGYRVVKGDGINYMIYAMGRMTYLWGEDAQEFRPERWLVNGVY QQESPFKFVSFNAGPRICLGKEFAHRQMKIMAATLIHFFKFRLEDESKEPIYKTMFTL HIDNGLHLLANPREISP</aaseq>

Gene Sequence

<dnaseqindica>3222..3413#2649..2849#1774..2112#1182..1466#756..971#1..345#atggttacccagctcacctacctagctgcatcagcaggagtgtgcttggcttcagctctagccatcgccttgctgtccatcgccctctacatcatcggcgtcgtcgcctccttcgccgtcctctgcgccaaggagttcgccgagagagcccacgaccggccgccgctcgtcggaacagttttccggcagctcaagaacttcgacagaatgttcgatgaacatgtcaactatgcaaccgcgcatcgcaccagcaggattgtgtatcccggtcactgcgaggtctttacttctgatccggccgtcgttgagcatgtcctcaagaacagcttcagtaaatacagcaaggttttttacttcaatctttcttaccaaaattttccgcctgtgattctgtatgtcaggcgtttattacctgcaagatttgtacaaacgatgatcaaaagcttgcatgctgtacaatacggcatatgctatgatatgttctattataaaaaaaaatatagcttagtgcaatacacatgactatattcatttctgaaataaaagctaaaatgaccgagtaacattaccatatatggctcggttaaaaaaaaacacatttccatataaataattaacttaagagaacagtatatttatataaagttagttagcatgtccatatgagttaaactcataagcaagttactagtaactatggaaagtatatatagttgagcctatgagatcttacagtgtttgagcctgattcacagggggacttcctcactacagccatgaaggatctctttggagatggaatttttgcaacagatggggatatgtggcgtcatcagaggaagctagcgagctacgaattctcaaccaaagtgttacgtgacttcagcagtgacacattcagaaggaatgctgcaaaactggcagagaagatctcatgtgcagcagctaacagaattagcataaatattcaggtacttccatgactaagatcagcacaaaagaaagttttggtaaatgctaagatcaaatttatagctgtaatctatacgcgttttagttcagcacctttacagaactgcaaaaattaaaacaaaacctacatataaatgaaaaaactggtagttctcactatttcacccttttaattgcaaatcaagttattgtcattcaattttcctcaggatcttttgatgagagcaactatggactcaatctttaaagtggggtttggttttgagctcaacacactatctggatcagatgaatctggcattcaattcagcaaggcctttgatgaggcaaactcccttgtttactaccgatttgttgacataatgtggaaactgaaaaggtatcttaacattggatcagaagccaaactcaagaggaacattcagatcatcgacagctttgtgatgaaactgatccatcagaagagagagcaaatgaagattgcagctgactatgtaagggactcaaaattctatctgtaatgttgttttctacagtttatgatatcatgcctttccaaatagctcatgtttctggagcaacaagtagatgcataaagttgaatttgctagtgaaataacagcagcttcccaaatatttcattttcaacttgcttgaatgcagttctgtggtctgatgtgctccacaaatccaaaatgaactctgaatttagtcactctaagttttcttaatacaaaaaaatataagacagagctaacatactgcattgttttatttctaattcttttttatggcacgcagaaaaccaaagaggacatcctatcaagatttgtactagcaagtgagcaagatcctggaacaatggatgaccgctacttgcgtgacatagtcctcaacttcctgatagctgggaaagacaccacaggaaatacccttacctggttcttctacctgctatgcaagaaccccatagtgcaggataaggttgcccttgaaatcagagagtttgttgaatggagcaaggaagataacactattgaaagcttcaccaaacgactggacgaaggtgcaattagcaaaatgcactacctccaggctacaatttccgagacactccggctatatcctgctgtcccagtggtatgaataactttcacggctattccctgtatagagtggagttgaactaaaataaatctagtcatgatttggctcgatatggatctggtattaagtaggtcacatgccaacaatggatattagtattggaagtgttatctcatattgaagggttcattcctcagcatggaaacctacattaccatgagatatctgaatataacagtaaataatgagaaacaaagtaaagagaatcttagttatccttgggaattcttgcccaaaagaaaaaaatattaaggagtattttcatttgtccaccatctttttgtaaagtaaggaaatattataggaagaggctgcaaggcaagtgttgttcaaagagaagtcttaattatgcagcatagctttatggtactgttagattttagtgcaatctgcaatattcattaaagggaaaatcaatatcacatttctcaaacgttgtacgcacaaaaaaaaaatatgactaaaaacatcatcgccttcgtaaaaatacttttatattgtttttgcaggatgctaagatggcagacgaggatgatgtactaccaaatggctatagagtggtaaaaggagatggaattaactacatgatttatgccatggggaggatgacatacctttggggtgaggatgcacaggagttcaggcctgaaagatggcttgtgaatggagtttatcagcaagagagcccgttcaagtttgtgtctttcaatgtaagtactaccagcaagaatcatttacctcaacatgtttaaatctagccttctgtagatcaagaagaaaagtcaaatatacaataccgcattccaactgaagcagggaaaaagaatatcatgctacaaaattgcaagtaacaataaatcatcccatgcatgtctttcttttcagaatgaggtgataatatcacctgtattttgaggatgaggattgaaacttgcatcatgcggttacatttagccaaataaaaccataattgcatgtgttaacacttaacaccagttctcatattctaaaaataacccaagacaatttcactttcctgtagacaagaatctccattaataagtctattttaccatgatcaggctgggccacgtatctgcttggggaaagaatttgcacacaggcagatgaagatcatggctgctaccctgatacatttcttcaagttcagactggaagatgaatccaaggagccaatctataaaacaatgttcactctccatatcgacaatggtctccatctgcttgcaaaccctcgagaaatttcaccatgaaccccaaacaagctactgcatccttttgttattttattggaacatatgcatttctaacatccgtcctattaggcaagtaataataatctgtcccaagtagtcgtatgaaaacaacaaagtagcaatgggacaatttgcccggtaaaagtaaggtgcttgtacaatttaatatgcttgtaatagggtgcttaaagaaagaggatgcagctatatcatcaactacgtatttaagcttcatttctttggatgcaagaacctctttgtatgtgcctggaaagctatagcttatattgtccataactaaagatagtctttgtgcataagaaacttttaag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0129900, RefSeq:Os06g0129900