Os06g0130100

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0130100| Description = Similar to ERECTA-like kinase 1| Version = NM_001063222.1 GI:115466175 GeneID:4340000| Length = 6327 bp| Definition...")
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Gene Name

Os06g0130100

Description

Similar to ERECTA-like kinase 1

Version

NM_001063222.1 GI:115466175 GeneID:4340000

Length

6327 bp

Definition

Oryza sativa Japonica Group Os06g0130100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1604743..1611069

Sequence Coding Region

1604799..1605037,1605504..1605575,1605800..1605871,1605972..1606043,1606325..1606396
,1606608..1606679,1606777..1606848,1606936..1607007,1607092..1607160
,1607278..1607349,1607475..1607546,1607630..1607701,1607786..1607857
,1607940..1608011,1608100..1608171,1608286..1608357,1608449..1608520
,1608633..1608704,1608801..1608872,1608962..1609033,1609110..1609191
,1609236..1609353,1609439..1609570,1609676..1610014,1610097..1610467
,1610599..1610952

Expression

GEO Profiles:Os06g0130100

Genome Context

<gbrowseImage1> name=NC_008399:1604743..1611069 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1604743..1611069 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgagggcgccgtggctgtggtggtgggtggtggtggttgttggtgtggcggtggcggaggcggcctccggaggaggaggagggggagatggggaggggaaggcgctgatgggcgtgaaggccggtttcgggaacgcggccaacgcgctcgtcgactgggacggcggcgccgaccactgcgcgtggcgcggcgtcacctgcgacaacgcctccttcgccgtcctcgccctgaacttgtcaaatctaaacctaggaggtgagatctcgccggccatcggagagctcaagaatctacagttcgttgatctcaaggggaacaagctcactggccaaatcccagatgagattggggactgcatctccttaaaatatttggatttgtctggcaacttgctgtatggagacatccccttctccatctccaagctcaagcagcttgaggagctgattttgaagaacaaccagctcacgggacccatcccttccacattgtcccaaattccaaatctcaagacattggacctggcacagaaccagcttacaggcgatatcccaaggctcatatactggaatgaagttctgcaatacctaggtttgaggggtaactcactgactggaactttgtcacctgacatgtgccaactgactggcctgtggtactttgatgtaaggggaaacaatctcacagggaccattccagagagcatagggaactgcaccagctttgagattctggacatttcgtataaccaaatctctggagaaataccttacaacataggctttcttcaagtagccacactgtcacttcaaggaaatagactgactgggaaaattccagatgtgattggcctgatgcaagctcttgctgttctagacctgagtgagaacgagctggtagggcccattccttctatactgggcaatctatcctatactggaaaactatatttacatgggaacaaacttactggagtcataccgccggagcttgggaacatgagtaaacttagctacctacaactgaatgataatgaattggtgggcacaattccagcagagcttggcaaacttgaagagctttttgaactaaatcttgccaacaacaatcttcaaggtcctattcctgcaaacatcagttcttgcactgctctaaacaaattcaatgtttatggcaataagctaaatggttctattcctgctggtttccagaagttggagagtctgacttacttgaacctatcttcaaacaatttcaaaggcaatattccttctgagcttggtcacatcatcaacttggacacattggatctttcctacaatgaattctctggaccagttcctgctaccattggtgatctagagcaccttcttgaactgaatttgagtaagaaccatcttgatgggccagttcctgctgagtttggaaacttgagaagcgtccaagtaattgatatgtccaacaacaacttatctggtagtctgcccgaggaacttggacaacttcaaaaccttgatagcctgattcttaacaacaacaatttggttggggagatccctgctcaattggccaactgcttcagcttaaataaccttgcatttcaggaatttgtcatacaacaatttatctggacatgtcccgatggcaaagaacttctcgaaattcccaatggaaagcatcttctaatttctgattgcaaccagtacataaatcataaatgcagcttcttgggtaatccattactgcatgtttactgccaagattccagctgtggacactctcatggacaaagagttaatatttcaaagacagcaattgcttgcattatcttaggctttatcatattgctctgcgttctgctgttggctatatataaaacaaatcaaccacagccacttgtcaaaggatccgataagccagtgcaaggacctccaaagctagttgttctccagatggacatggctatccatacttacgaggacatcatgaggctgacagagaatttgagcgagaaatacatcattggctatggcgcctcaagcactgtctacaaatgtgaactcaagagcggcaaggccattgctgtcaagcggctttacagtcagtataaccatagcctccgagagtttgaaacagaactagagacaattggcagcatacggcacaggaatcttgttagcctccatggcttctcgctatctccacatggaaacttgctcttctatgattacatggaaaatggttccttgtgggatcttctccacggtccatcaaagaaagtgaagctcaactgggacacaagactgaggatcgcggtcggagctgcacaagggctggcctatctccaccatgactgcaaccctcgcataatccacagagatgtcaagtcctccaacatcctgctcgacgagaacttcgaagcgcacctctcagatttcggcatagccaaatgtgtcccctctgccaagtcccatgcctccacttatgtgctaggaaccatcggctacattgatccggagtatgccaggacttccaggctcaatgagaaatctgatgtgtacagcttcggcatcgtccttctggaattgctcacagggaagaaggccgtcgacaacgaatcgaacttgcatcaattgatactctccaaagctgatgacaacacagtcatggaggcagtggactcggaggtgtcagtgacgtgcacggacatgggactggtcaggaaggccttccagctcgcccttctgtgcaccaagaggcacccttcagaccggccgaccatgcacgaggttgcaagggtgctgctctccctgctgccggcctccgccatgacaacgcccaagacggtggactactcccggttgctggcgtcgacgacgacggcggccgacatgcgagggcacgacgtgaccgacatcggcgacaacagctcctccgacgagcagtggttcgtcaggttcggcgaggtcatatccaagcacacaatgtga</cdnaseq>

Protein Sequence

<aaseq>MAAARAPWLWWWVVVVVGVAVAEAASGGGGGGDGEGKALMGVKA GFGNAANALVDWDGGADHCAWRGVTCDNASFAVLALNLSNLNLGGEISPAIGELKNLQ FVDLKGNKLTGQIPDEIGDCISLKYLDLSGNLLYGDIPFSISKLKQLEELILKNNQLT GPIPSTLSQIPNLKTLDLAQNQLTGDIPRLIYWNEVLQYLGLRGNSLTGTLSPDMCQL TGLWYFDVRGNNLTGTIPESIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGN RLTGKIPDVIGLMQALAVLDLSENELVGPIPSILGNLSYTGKLYLHGNKLTGVIPPEL GNMSKLSYLQLNDNELVGTIPAELGKLEELFELNLANNNLQGPIPANISSCTALNKFN VYGNKLNGSIPAGFQKLESLTYLNLSSNNFKGNIPSELGHIINLDTLDLSYNEFSGPV PATIGDLEHLLELNLSKNHLDGPVPAEFGNLRSVQVIDMSNNNLSGSLPEELGQLQNL DSLILNNNNLVGEIPAQLANCFSLNNLAFQEFVIQQFIWTCPDGKELLEIPNGKHLLI SDCNQYINHKCSFLGNPLLHVYCQDSSCGHSHGQRVNISKTAIACIILGFIILLCVLL LAIYKTNQPQPLVKGSDKPVQGPPKLVVLQMDMAIHTYEDIMRLTENLSEKYIIGYGA SSTVYKCELKSGKAIAVKRLYSQYNHSLREFETELETIGSIRHRNLVSLHGFSLSPHG NLLFYDYMENGSLWDLLHGPSKKVKLNWDTRLRIAVGAAQGLAYLHHDCNPRIIHRDV KSSNILLDENFEAHLSDFGIAKCVPSAKSHASTYVLGTIGYIDPEYARTSRLNEKSDV YSFGIVLLELLTGKKAVDNESNLHQLILSKADDNTVMEAVDSEVSVTCTDMGLVRKAF QLALLCTKRHPSDRPTMHEVARVLLSLLPASAMTTPKTVDYSRLLASTTTAADMRGHD VTDIGDNSSSDEQWFVRFGEVISKHTM</aaseq>

Gene Sequence

<dnaseqindica>57..295#762..833#1058..1129#1230..1301#1583..1654#1866..1937#2035..2106#2194..2265#2350..2418#2536..2607#2733..2804#2888..2959#3044..3115#3198..3269#3358..3429#3544..3615#3707..3778#3891..3962#4059..4130#4220..4291#4368..4449#4494..4611#4697..4828#4934..5272#5355..5725#5857..6210#ggggaggaggagcggcttgagagggaataagctaggtggtggtggttcttggatcaatggcggcggcgagggcgccgtggctgtggtggtgggtggtggtggttgttggtgtggcggtggcggaggcggcctccggaggaggaggagggggagatggggaggggaaggcgctgatgggcgtgaaggccggtttcgggaacgcggccaacgcgctcgtcgactgggacggcggcgccgaccactgcgcgtggcgcggcgtcacctgcgacaacgcctccttcgccgtcctcgccctgtacgtcctcctccctgcgaagctcggtgttctttcctgggcagacatggcgcgcggcggcgcgggtggttgcgttcttgttcttgcaatcttctcttgtggtggctgttggttttttcttttcttttctttttccagcgtgcactctgtgcttcatgtgatttttctctcttgccgtgctcgctctggcattctgatcaggaggagcaaatagttcaactgttctgttctattcttgcctcccttttttttctgaataaaaaccttttcttggttggtctatttgtgcctagattgctgtgaatgtttcttcttgataatcttgttgttatcgtatatatctaatggaaaagaaacgggtttttcttgttatcttgcgtaggtctttggatattagtgaggctatcttgtttgttatgctaaaaaggatttttgtgatgagagtgtttccctgtgtgaaaaacaggaacttgtcaaatctaaacctaggaggtgagatctcgccggccatcggagagctcaagaatctacagttcgtgtgagtacggatatgagtagagagtactatttccccttgctttgcatctacctgagtttttgtgcatttgactagcctgtattttctttttataatcctgcacacttcacctgatttgacccctcatgccatgatgtgacacagttctttactattttactttaagcctgtggatttgctcgctgattagtttatttgtgctctaatgatttgcctctctgcagtgatctcaaggggaacaagctcactggccaaatcccagatgagattggggactgcatctccttaaaatatttgtacttcacctaatctaagtcttcttttattctgttactttttgtaacagggtgttctagctaattttttaattgggctcttttgattcttgccatgcagggatttgtctggcaacttgctgtatggagacatccccttctccatctccaagctcaagcagcttgaggagctgtaagctctactttttttaaatcttttcctaccttttctttagcaagagctatggcctatagctgttgagatatgggcacttcctctcccttctttggaaagttcaggctaatactgagacatcagagactaattgatttacattaagttttggaacatcttgttctagaatccagattatgatactgaacatcttgttggagtagtagtagtttttttcatggttttgcgatgcttgggttgtagtggtaacattttttctctctcatttattgatgcaggattttgaagaacaaccagctcacgggacccatcccttccacattgtcccaaattccaaatctcaagacattgtgagcctcttagtaccttactctatccgtgactatttacttctttggggttcttggacaaactgggtgatctgacttctacttgtttaactgtttttgtgttataatgtgcgtgccacgggaaacatggcttgctgtgtcattttttgcatcttaagtactactagttcttacttactgataaaatccttccttaattatcttggaatagggacctggcacagaaccagcttacaggcgatatcccaaggctcatatactggaatgaagttctgcaatacctgtaagaatcctataaaagaaaattgtctaactgttttagctggtagtataagaaggtatttttcaggcattaacactttgcttctcttaatcttcagaggtttgaggggtaactcactgactggaactttgtcacctgacatgtgccaactgactggcctgtggtacttgtaagtcatctcctctccctttggagatgttgctgcatattgtgcaacttggccttgttgacagtggttactgttcttaatctacagtgatgtaaggggaaacaatctcacagggaccattccagagagcatagggaactgcaccagctttgagattctgtatgttcttgctaagatttcagtaatatttcagtgttcatgagtttcagacaccataatgcgagtttcttatttgtattgcagggacatttcgtataaccaaatctctggagaaataccttacaacataggctttcttcaagtagccacactgtaagtgttcctgagttattgcaaatcctctaacatgtaatctgctgtttcactcttatgcatatagatgctttacttacagcctttatgttgaaccatttctattcatgttcataggtcacttcaaggaaatagactgactgggaaaattccagatgtgattggcctgatgcaagctcttgctgttctgtgagtagagcacgacatttcaatccataggttttagtagtttctgtaatatttttttgactgaaattcagtagtttctgtaatattggataatgaattcttatattcattttttttattctcagagacctgagtgagaacgagctggtagggcccattccttctatactgggcaatctatcctatactggaaaactgttagtatcatcagtcagactttctttttcactgagattgctttcttctcttctctaacacctactgtcaccttttccttcagatatttacatgggaacaaacttactggagtcataccgccggagcttgggaacatgagtaaacttagctacctgtaagtgattatatggtatgcagatattgttgtgctccagttggtgtggaacactataagatgttcagaaatttttccatgcagacaactgaatgataatgaattggtgggcacaattccagcagagcttggcaaacttgaagagctttttgaactgtaagaaattttatcatgtctatgagttacgtagtatgctttattttattctgtgcaattgttgaccaaattttgcatgcagaaatcttgccaacaacaatcttcaaggtcctattcctgcaaacatcagttcttgcactgctctaaacaaattgtaagttagccggtactaagtcaacttataagttaacagggcattttttactccacatgattaaacatgttttttttttgcctctcagcaatgtttatggcaataagctaaatggttctattcctgctggtttccagaagttggagagtctgacttacttgtgagtaattgtatctgttgcattatgcttacagtaatcatttaattcactcggcgaaattattgtatttcacctaatgtttttcttgcttaaaaatacatttaaaaaatacaggaacctatcttcaaacaatttcaaaggcaatattccttctgagcttggtcacatcatcaacttggacacattgtaagtagaaactttagctataattatttacctggtgttacaagacctgtgggcgctaaatgatgttcctttattattattttttgaacagggatctttcctacaatgaattctctggaccagttcctgctaccattggtgatctagagcaccttcttgaactgtatgttgcggaccaacctcctagaaaccatactgtttttaatgaaaaaaccataacttatttcatatggccattattacttgatgcctaaatggttatgctttgactgcaggaatttgagtaagaaccatcttgatgggccagttcctgctgagtttggaaacttgagaagcgtccaagtaatgtaagtgtgttcccttgaaacacatgtaactaactattatctgtttgaagccatcctatcatcatgattcagctgaaccaaaatttaaattctcagtgatatgtccaacaacaacttatctggtagtctgcccgaggaacttggacaacttcaaaaccttgatagcctgtgagttgtatatcatcataaattcatattatgcgtgtgagatcgaaaatcacctaaatattttactgagctatggtgttatcatgcaggattcttaacaacaacaatttggttggggagatccctgctcaattggccaactgcttcagcttaaataacctgtaagttttgtgtgcaagctctgctctgtagcattgtatactggtgataacttgggcaggattatttatccttaagtgcatttcaggaatttgtcatacaacaatttatctggacatgtcccgatggcaaagaacttctcgaaattcccaatggaaaggtataagatggcaccatgcacaatctctgttatccttctattagcatcttctaatttctgattgcaaccagtacataaatcataaatgcagcttcttgggtaatccattactgcatgtttactgccaagattccagctgtggacactctcatggacaaagaggtatcagacaagaagctaaccccttgtagcttttcactccatttgcttttctgctaaacacatgttcacttaatttctattgcagttaatatttcaaagacagcaattgcttgcattatcttaggctttatcatattgctctgcgttctgctgttggctatatataaaacaaatcaaccacagccacttgtcaaaggatccgataagccagtgcaaggtatgtgtgcgctatatctcacccctccagttgtcgtcgatgaaattaacagcaagtatgctggcataatggaattcatcttaaccttttcttaatcatattcaggacctccaaagctagttgttctccagatggacatggctatccatacttacgaggacatcatgaggctgacagagaatttgagcgagaaatacatcattggctatggcgcctcaagcactgtctacaaatgtgaactcaagagcggcaaggccattgctgtcaagcggctttacagtcagtataaccatagcctccgagagtttgaaacagaactagagacaattggcagcatacggcacaggaatcttgttagcctccatggcttctcgctatctccacatggaaacttgctcttctatgattacatggaaaatggttccttgtgggatcttctccacggttagggcttgaaacctttggctcatggataatttgttatcattatgcatctcccttatgatctatatatgatccttttcaggtccatcaaagaaagtgaagctcaactgggacacaagactgaggatcgcggtcggagctgcacaagggctggcctatctccaccatgactgcaaccctcgcataatccacagagatgtcaagtcctccaacatcctgctcgacgagaacttcgaagcgcacctctcagatttcggcatagccaaatgtgtcccctctgccaagtcccatgcctccacttatgtgctaggaaccatcggctacattgatccggagtatgccaggacttccaggctcaatgagaaatctgatgtgtacagcttcggcatcgtccttctggaattgctcacagggaagaaggccgtcgacaacgaatcgaacttgcatcaattggtaagccaccccacttccacagttccactccatcctctcatcacattgtgcaaaattatcaccaattctagaacttttctagcatgatccaatggatgatttgtatgacaagatcttgtgtcaatgttcagatactctccaaagctgatgacaacacagtcatggaggcagtggactcggaggtgtcagtgacgtgcacggacatgggactggtcaggaaggccttccagctcgcccttctgtgcaccaagaggcacccttcagaccggccgaccatgcacgaggttgcaagggtgctgctctccctgctgccggcctccgccatgacaacgcccaagacggtggactactcccggttgctggcgtcgacgacgacggcggccgacatgcgagggcacgacgtgaccgacatcggcgacaacagctcctccgacgagcagtggttcgtcaggttcggcgaggtcatatccaagcacacaatgtgatcttctccaaacctccaaaattttctcctccccaagatgctaaaaggatagtagcacagtgcaggaaatagtagctagatgtaggatctgaagttagatgaccatgatgatgatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0130100, RefSeq:Os06g0130100