Os06g0130200

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0130200| Description = Conserved hypothetical protein| Version = NM_001063223.1 GI:115466177 GeneID:4340001| Length = 6514 bp| Definition ...")
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Gene Name

Os06g0130200

Description

Conserved hypothetical protein

Version

NM_001063223.1 GI:115466177 GeneID:4340001

Length

6514 bp

Definition

Oryza sativa Japonica Group Os06g0130200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1612671..1619184

Sequence Coding Region

1613320..1613358,1613447..1613521,1613603..1613665,1613745..1613810,1614133..1614202
,1614513..1614622,1615324..1615399,1615483..1615604,1616140..1616187
,1616575..1616683,1617092..1617248,1617372..1617521,1618809..1619061

Expression

GEO Profiles:Os06g0130200

Genome Context

<gbrowseImage1> name=NC_008399:1612671..1619184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1612671..1619184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcgacgacgaggatatgcgcgacgtctcgtccacgtcgtcctcctcctgcggcggaggggagggcgcggggttcgaggaggggatgggggagggggtgatggtgatggaggtgaggtggttcgaggtggacctggagtacgagttcgacgcgcccaggtggttcgacctcgccgtggaggagtcgccggtggaggcggcggcggcgcagctgtggttcgcctccgcgcccagctacccgccctctcccttaattgccaagatgttggctgaagatcttgggttgcaaagtttaagaagcactgtggatatagatgcagcacattgctctaaatcctctcatgaatgttccaatggtgctgaacaaacgatccatcggccacatataccaaatgaaggaaggataccttgccatcaagtttcagcgaacgagcgaaaacatggcgttcgaactattggaaaaggaactatcccaaagaggtctacactgatgaagcctacagccagtcaattagccaggcaaaacagacaaattgaagtgaagaactccacacagagtaaaaagtcggttggggtgagaagtgatagaagtaccatgagctccaatgactgcacctaccaagctgctaaaaggcagagactagaaagagggcatctcaacaaggttgtttcaactaatcaacctgagttgatccataagaatcatgcaaagaatgttatgactagtagctctgatcatgccattgctgtaccaaaattgaagattacaattcccagagaacctgaattggcaacaaagctaagagcagagaggtcaaggatactcagagcagtgccaactaattcaaagcagctaaacaaacaggcggcacaatccatttctatgacacaagcgtcatcgattagaaaggttgtgcaaccttctgggcgcaatgatcatcagcatgcaagtgttccacatcgcggtattgggtcaaatgtgccagtgtgtactgctaatcgtccaaggcatcttgacaacatttgcaaaacgccggatgagtgcagagatgacctgtttaaatttaaagctcgaccagtggataaaaagatactaggaagcaaaggagatattggtgtatttcaaaatgccaaaaggagcacaacagttcctaaggaatttaagttgtcaactggtaggaagggtaagcaggctccattatctgaactcttcaacaagctcactttaactactgaagcacgccgtgctttagatcaccggactgctgatcttccaaattatattaccaccaaggactgcaaagagaacatgattggtaacatgcaaagctag</cdnaseq>

Protein Sequence

<aaseq>MDGDDEDMRDVSSTSSSSCGGGEGAGFEEGMGEGVMVMEVRWFE VDLEYEFDAPRWFDLAVEESPVEAAAAQLWFASAPSYPPSPLIAKMLAEDLGLQSLRS TVDIDAAHCSKSSHECSNGAEQTIHRPHIPNEGRIPCHQVSANERKHGVRTIGKGTIP KRSTLMKPTASQLARQNRQIEVKNSTQSKKSVGVRSDRSTMSSNDCTYQAAKRQRLER GHLNKVVSTNQPELIHKNHAKNVMTSSSDHAIAVPKLKITIPREPELATKLRAERSRI LRAVPTNSKQLNKQAAQSISMTQASSIRKVVQPSGRNDHQHASVPHRGIGSNVPVCTA NRPRHLDNICKTPDECRDDLFKFKARPVDKKILGSKGDIGVFQNAKRSTTVPKEFKLS TGRKGKQAPLSELFNKLTLTTEARRALDHRTADLPNYITTKDCKENMIGNMQS</aaseq>

Gene Sequence

<dnaseqindica>5827..5865#5664..5738#5520..5582#5375..5440#4983..5052#4563..4672#3786..3861#3581..3702#2998..3045#2502..2610#1937..2093#1664..1813#124..376#cccgaccccgcatttcaaatttcctcctccgcctcctcctcctcgtctccggccaccgttaaatacctcgccgccgaccaccaccaccgcggcggccctgaccccaccctgcgagccctagccatggacggcgacgacgaggatatgcgcgacgtctcgtccacgtcgtcctcctcctgcggcggaggggagggcgcggggttcgaggaggggatgggggagggggtgatggtgatggaggtgaggtggttcgaggtggacctggagtacgagttcgacgcgcccaggtggttcgacctcgccgtggaggagtcgccggtggaggcggcggcggcgcagctgtggttcgcctccgcgcccagctacccgccctctcgtgcgtgcccatccatccctacacctcttaatttattgtgatgtttttctgcatggcggggatgattcgggaaggggggttgggtccttggggatgggatttagttcgatcgatcgattcgcggttgaaatcgtcgatttagtatgtgcgccattggtgggatttctattatgcagtgtgttctcccttgcattattgatccgagaaaggaggtttgggagtccctaatttcgaagtgcttctaggggcagcatgcacatgaattttctgaaatactcccaacattttcagaccagcatgattcaatagagtgtgaaatggttgagtgtcatcaattcgggtcagcattgatcacttagatggatgagggatgcatttaacagagattttcctgtttctaattgtgtaatttggcctcgatgttaaagtttgattgtcaaccgcaatgagtccattttcctgataataaatgaagaagaaaaagctatgctgttctcaaggaaaactgatgttcttgagatgttaatggtagagaaggcacccacaggtatccaggcccatagcaaaaaggaatgtatgatgtagcaaggcaatggccattggccttttaggtttctttcatgagcatccacaactaagagacatcttggaacatgtgactgcaacaaacagactttggttagttgcaactaatttggtgtattcaccctaaaactttgacaactaatgctagatataaattgtaagctggtagagttatgtttgttagtatatactttcctggtatttctggtcttctggaattgattaaatttacatgtgttacaaacccaaaatgatatgggaggtgaaagtgaaatatcatccttggttgtatgcatcaatttttggacaaaactacgatggatagttcattgttttactactcaagccttttctattatcattaatatgtaagtacaaatatttttttggttatttctgtagttttaatgtttagctcatgacaaagatagaactatcatattacatgacagggaaacttatggttacaacactagcaaggtagcataaaaaacagtaacaagaagtgaataaaatatgtactactactataatgacacttgtttgattatttgacctgtatgaattatggaaacgttagatgttatttttacagtttaactcgctattgaactgtcattacattcatttttcctttttaattggttattgccctttgttgtcaacttaatatgactgaaattttctctgttgtttctgcagccttaattgccaagatgttggctgaagatcttgggttgcaaagtttaagaagcactgtggatatagatgcagcacattgctctaaatcctctcatgaatgttccaatggtgctgaacaaacgatccatcggccacatataccaaatgaaggtccctataagcccaaagttttctccattatgttttttcctattgcatttcttaccatatttgagcatttcatttagcctgttatgctttgatcttttacccagcttcttttatgtaaaataggaaggataccttgccatcaagtttcagcgaacgagcgaaaacatggcgttcgaactattggaaaaggaactatcccaaagaggtctacactgatgaagcctacagccagtcaattagccaggcaaaacagacaaattgaagtgaagaactccacacagtatgtaaatgttatgccttatgctaattcatattctttagctgtcctagggttggtacatacaaaatttggagtattattctctgttggatgattttataacaattttctgattttgaagagatgcatttaccctgccatacttgcagttccatgaacatgtgtttcttgttggtttactcacctgccattcttgatgaattaaccatccactagcattgatcttaaccgtttatgtcagtatatgcttgtgtagccatcacgtttttctctttcacttcattatttccggactttcaccacctttccttttgttttagatttgcactgcaaggatttttcaatacatttaaagcaaatgctgtcttcatgtttctgaacttatgtaccaatttgctttactatcaggagtaaaaagtcggttggggtgagaagtgatagaagtaccatgagctccaatgactgcacctaccaagctgctaaaaggcagagactagaaagagggcatctcaacaaggtattttgctgttttttattttctggggggtatgaccaccccaaattatctggtgaagttgtttcttaactgtaaaacacagtgaagtttgtcggtacagttttaacttgaaataccacataattttggtagggcatttacctttagttttgagattgcatactagaaactagattatatttgtctggattaatcgagaatacttaattgactacagtcatggttctcatggcaactgacaatggcagctaattttttctgttagcatcgccaaagtaatagccacaaaaccatttatactgttttttcactacagagtgatcagtgcctatttgatattgatttgttgcataactagtcactgaagcttctttacttattgcacaggttgtttcaactaatcaacctgagttgatccataagaatcatgcaaaggtcaagacacctcaaacatttacttctctctcatttcctaggaatatttcagctgttccatttcaattctatagaaaaaattagaaaattatttggactttttatactatagtttttcttaaagtgcttgacatactcctgcaactagccaatcatagctgttatactatgcattaacaattagggatgcaagcgggccgacccgcaagttcacttataggtcaaataaatgataattcatgggttttcgcgtcgtggtccggtttgccgcatctagatatgcaagtggatcgatccataaatccatttataggtcaaattaataggtaacccgctggtcaaacccgcgggttacgtactaattttgcctataagcgggttcgcggacaagcccacttgcacccctattaacaatctctaatatagaatataccttttatgatacaaaacatgctcatcgtgcaagtttatacatgatttctctgaggctgtgcctcaaattttgcttgacgatgctttctcatggttgacacagaatgttatgactagtagctctgatcatgccattgctgtaccaaaattgaagattacaattcccagagaacctgaattggcaacaaagctaagagcagagaggtcaaggatactcagagcagtgtaaagtcattttctctcgctctcctgtttgcctgaatgtcaagtacttctaggcagctcatgtccttttcttgaaatttcaggccaactaattcaaagcagctaaacaaacaggcggcacaatccatttctatgacacaagcgtcatcgattagaaaggtggattacattactgttgggtttttgcagcttgttctggttgtcttcactaactattaaaaaataaagtaggttactcacacttacatacatgagcgagccctgccagacaatatgtatgactcattctatggttttcaatttttggaggatggcaatactcagtttgtttgatagagttccctaatctcaaagaattttagaagacggtggcacctgtgaggccacagaaatattcatagcagagatgtacatgtcaagatctcaagagaatgttgcttttttaatgtataatagcacagcgtcttggtggctgatagtgtaactgtaactgtgacagttcagaaatggtttcatttatgttttgtccaaagaaacaaataatttgtagaaatatttagaaaaaaaacattcagttcaatcagtgaaagtcatacacatagtttttaaatcatcttttccaatttattatgtgcccttgtacactattctggatctaattgcatggttgaagctgttctgtttactgctattttctgccctcaaagttgaatcattgtcctgtactaggacaggcacctctacatttagatggttaacttttaatttgcactatataatctttattctctgtgaataggttgaaacgacttatcatatacacactatccatgcctactaaaaacttggttctctggcaggttgtgcaaccttctgggcgcaatgatcatcagcatgcaagtgttccacatcgcggtattgggtcaaatgtgccagtgtgtactgctaatcgtccaaggcatcttgacaagtaaggcttgttttttatatacctcctcacttctagtcccattactatttacataatatccatcctattcggcagtacaaaggaaagtaaaatatacctcctactattctcttgtaagtatttcctgtaattttctagttttggtcaggacaggtttcttcatggaaccaaataatgcaatagtaaagactgttatgcttttgattctacccagtacctatgattttcccaaggcagtgaaacttcagaatgatgtgatcttctgtaaatagagctgaacttgtggctattttctgtgctctgttaacagcatttgcaaaacgccggatgagtgcagagatgacctgtttaaatttaaagctcgaccagtggataaaaaggttggtgctgtggatggatcttctatgcttgctttgaatcttttagttcatactgctctggacctgtttatctttgaagtttgaaccctagtttccaatggcctggatagcgcctagttgtattgattgatatacctgttgcaatttcatgttctgggtgtcagtggccctacttttataatacagataggaattaattgctgaatatgcagttgcttaagaaacaaccctacagacagaatataggaaagttctagtttcacatatttgattaactgcaaatgcagccattgaatcttacattttctttgccttggaacagatactaggaagcaaaggagatattggtgtatttcaaaatgccaaaaggagcacaacagttcctaaggttctctctttctctgtgtgtgtgtgtgttgtggtttgttataaattcctcactcatatttcttgcttgaaaatcctaggaatttaagttgtcaactggtaggaagggtaagcaggctccattatctgaactcttcaacaaggtacgtactgatagaacagaaactgattgcccttactccttagattatttgctctgatgtttactcgtattatttttgaagctcactttaactactgaagcacgccgtgctttagatcaccggactgctgatcttccaaattatattaccaccaaggttctttccttgtttcaatttagcttgtttttactcccttgcgcctttaaacaaagtaactaaaatatcactcctaatctaatgcaaggactgcaaagagaacatgattggtaacatgcaaagctagctatggtaggtaagtaatatttcactgccatacggggcatttatcatgtcgcttctcaagttagaaacaagtgcatcacacccttccacattttaccatttttcagatccagtcagtcaagacatacaaaacataggaattcttctctttgacaattcctggttcagattccttttctccacctgaacaaaggtaaacgttaactcctaatatttcaggtttcatgattcgcaatttcgcacagtgcatcatgtcatttcacaccctggcaactttccattatttttcagcaatacatttgggtattttcatgacactgatacttggggtgaactactgcattgacattgctctctactaccatgtaggctaagcgtctgttttggacagtaggatctcgacttcatttgagttttgacaaagatggagcgatacattattttgacttgaaggcaccgaccaaggcaccgtcccggccatccccggcaacctcccgtctccgctgccgtgcagctgaacataattccgtacctgctcgcggccatggcggagatcgatttgtacagagaaactaaccatgacgccggtgtgtactccagatctgtaacttgttgccaatcatcatccagcaaagttgcttgcttgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0130200, RefSeq:Os06g0130200