Os06g0130600

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0130600| Description = GAGA binding-like family protein| Version = NM_001063226.2 GI:297605115 GeneID:4340004| Length = 4282 bp| Definitio...")
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Gene Name

Os06g0130600

Description

GAGA binding-like family protein

Version

NM_001063226.2 GI:297605115 GeneID:4340004

Length

4282 bp

Definition

Oryza sativa Japonica Group Os06g0130600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1635573..1639854

Sequence Coding Region

1635863..1636789,1638022..1638090

Expression

GEO Profiles:Os06g0130600

Genome Context

<gbrowseImage1> name=NC_008399:1635573..1639854 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1635573..1639854 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaaccttggccatagagaaaatgggaggcaaaggccagaccaatataaaggacttcatacccagtggatgatgccccagacccaaaggcatctgaaggaccatcaaagtatgaatctcttggcactgatgaatgatagagataatgccatccgagaaagggaccatgctctggctgagaagaaggcagccatagctgagcgcgatatggcgtttactcaacgggatgctgcaatggctgagcgtaatgctgcagtcgtggaaagggacaatgcccttgctgctcttgagttagcacgtacaaacggattgaacatgaataacgggaatggattcccccaaggatctctcagcggatcaaagaacatccaccaccacgaccagctttctcatgctcagtcatcaccgctgcaactggcagattctccatatgatcatgctagagaaatgcacatatcagaagcataccctatctcaacagctccagggagtgctggaaaagcaaagaggccaaagaagaatagttcccaagcctctccattgaagaggccatcaggtgtgctccggaaaaccaagaaaccttctggtgactggaagaatgtcgggatgtctggttgtggagatgattctgctcatgcttctgtgatgaagaacgagtggaaggaccaaaaccttggtctgaatcaagttgcgtttgatgattccacgatgcccgcgcctgcctgttcatgcacggggaagcttcgccaatgctacaagtggggaaacgggggatggcaatcatcatgttgcaccatgaacatttccatgtacccactcccagtgatgccgaacaagcggcatgctcgcatggggggacggaagatgagcggcggtgccttcacaaagctgctgagccgactagcggccgaaggtcatgatctctcgacgccggtcgacctcaaggaccactgggctaagcatggtacaaaccggtacatcaccatccggtag</cdnaseq>

Protein Sequence

<aaseq>MDNLGHRENGRQRPDQYKGLHTQWMMPQTQRHLKDHQSMNLLAL MNDRDNAIRERDHALAEKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELART NGLNMNNGNGFPQGSLSGSKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPIS TAPGSAGKAKRPKKNSSQASPLKRPSGVLRKTKKPSGDWKNVGMSGCGDDSAHASVMK NEWKDQNLGLNQVAFDDSTMPAPACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPV MPNKRHARMGGRKMSGGAFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR</aaseq>

Gene Sequence

<dnaseqindica>3066..3992#1765..1833#cagtagcggtggcggcatcatcagcagcagcagcagcagcggtggtggtggtcgccgtagcggctgccagctttgacccccacctcacccgcctccggcggcgccgccgctcccgttcctgcgctcgccggcggcgcggcgggtcctcctcctttccctctggcgcgcggggccccgccccctctcccacccccaacatggaagcctctagaaggaggggaagctgctgatactgtagggtaaactctctccctctctctctatttccgcaaattgaggagtggtttccccccagatttttcgggtggtttcgcgcattggataagggagctcccgccgcgagcgagggcgcgcgcgtttttttggcggcggtgttgctcggtgagtgggtgggtgatctagggtttagcggaatccgatttgggcttagacgtgggtttttccagcgtcgggtttggagttcctgctgcaattaagccagcggaggaaaaggtttgatttggagctccaaattacttcgtcttgcttcaaagcgctgaatgcacatgcatgtgatgtgaggtagtacttggatgatggagtggtagtagcagtgttcatgtttgataagatcgttttggtggtgtgattcgagcatgcgcgttgggatgacgagcgtgtgagtgcttctgcttgactgcttccatggtagtagtggagccagaatcaggtgctatagtcactcatagccagttttggtgtggattatggatatgcgagttgaaattttgtgttcctctttaatgattgttgaacttgttgcgtatttatctttccaaaatggcgtggaactattgcactaattgtttgtgacttcgtgcatcttagatgtaacggctggtttgtcgattatctaaaaagtcagtttagtgtggatgctcttctctatgccgtgctggctcaagctccatacattttctgctgagcatgagctttgtctgtttagatatctacctttggtcgaatcaacctctgtaaagtaggaagcagctggagatagggcaaagctagcttcaatgctgtcgtcatgtgcggcttgagtgtataaaactttgcagatttgtttctgaggattcggttaaggtgtttgaacactgggctatgatcaggaaatcatgtactagtgtattcagtttcagtatcatgtagtaatttgaatagccaaggctttggtgatcctcacattgcttctttgctcagtacttgtgcactggttgtggagccaatgcataaatctatttcttctagagctttaaagggataatccgcacaattgacttattgcttgtttataaccatgaaccaaatcatgccttattattactggactcgtttttaccttaatacttctctagaattttactgtacccttttttccttgtatacctgtcaactttaaagtctctgcatggctatcctataccgaacagttataggcagatacatcttgcctgaagaagtcattcctcttcctcttgggttcaaaagtcaaccctctctagactctatcctatactgaattgtctctgtcgtctatcctctatcgcattttctttagttcccccttgagccccaagcttggtcctgacctagctagtttaccattggcatttggcacataccttccctggagtaacatttgcggtaccatttatctttgtttcttttcttatttttcaggtgatcgaataattgcccctttttctgttacaagcaaatgtgataatggacaaccttggccatagagaaaatgggaggcaaaggccagaccaatataaaggacttcatacccaggtttgtgcatcataagaatgcaggcatgattttagatttatttatattagtatggcacatgcaatatctaccattgtttaatatatttgctacgatgttcaattggattatttccctagatgaatactcaaaatgtgcatatatgttttggttagataaaagactgcttaaattctgactgcaaaagtgcaaatcaaaacattatctaaaaaaaggtgcaaatcaaacaaattgaaagatggggatatcagctgtcctgctttgctgtactgcgtgacaaaggcatatacatgtcaaagtacagaacaccttctgctacggcacttagataaaacttatgtgtgctgtccagtcaaaagttccacatatgcaagtttttaatgagtgtattacgctcacattgttggtattttggaaaataaccgaatactcaaattatggagatgacaaattttgatgggtgggaactgttttggtacaacatatccaatcagccgcaatcatttataactgttcatgtatgttctacttttctgtacttattcctgtattatggtgcgtgtggtatttaactgctttccatgttggaaattaattactgcgggtccaatgtaattatgtcaatcatgattttaagaaaatagaccttttggtgtagcttgcgtttagcatgcattcgtagcactattgtttacataggctttacctatcttattctttgtcaataagatatctcacataagtgctctagatggtcctagttctcttgcaatttacaggataactcagttctgttagattgtaatttatgctttacaagtgtgaatgctggcttgcagggaacatgcatttcttgtggaacatttgtgttatgtctgtgtctgtgtccaatctgagttttatgaactagcttcaggctgatgtatcttttcatgttgcgagctttttttgtccttttcttctacgttttctgtgctatgtatgtccttgttatagcaggaggtggatattgcaacctccaaaagatctttcagaaatgtgcactgttcagctttaaatgtataacttttcagctagatcacaaacaaaacaaataacattatgaactgatttaccagcatgtattgatttcatttatgaaagttctctgaagatagttgttataaagaatcattctctaaaagaatgtgccaaccatgtcaactaatatatccactcaatgtttttttcagtggatgatgccccagacccaaaggcatctgaaggaccatcaaagtatgaatctcttggcactgatgaatgatagagataatgccatccgagaaagggaccatgctctggctgagaagaaggcagccatagctgagcgcgatatggcgtttactcaacgggatgctgcaatggctgagcgtaatgctgcagtcgtggaaagggacaatgcccttgctgctcttgagttagcacgtacaaacggattgaacatgaataacgggaatggattcccccaaggatctctcagcggatcaaagaacatccaccaccacgaccagctttctcatgctcagtcatcaccgctgcaactggcagattctccatatgatcatgctagagaaatgcacatatcagaagcataccctatctcaacagctccagggagtgctggaaaagcaaagaggccaaagaagaatagttcccaagcctctccattgaagaggccatcaggtgtgctccggaaaaccaagaaaccttctggtgactggaagaatgtcgggatgtctggttgtggagatgattctgctcatgcttctgtgatgaagaacgagtggaaggaccaaaaccttggtctgaatcaagttgcgtttgatgattccacgatgcccgcgcctgcctgttcatgcacggggaagcttcgccaatgctacaagtggggaaacgggggatggcaatcatcatgttgcaccatgaacatttccatgtacccactcccagtgatgccgaacaagcggcatgctcgcatggggggacggaagatgagcggcggtgccttcacaaagctgctgagccgactagcggccgaaggtcatgatctctcgacgccggtcgacctcaaggaccactgggctaagcatggtacaaaccggtacatcaccatccggtagcttgctgatgaacgcggatgtgattcaagctggaaagatggggaagatcaggcaaatcttgcttctcctgcattccctaaaccctttgctagggccagtctttgtaaggttgtcattggtttgtagcggatgtaggtagaattttgtgtttaaagttctgtaggttcttctctcccgttctgaactctgaattttctcgtggctctagaacgctgcagcccacgagaattaaaaaatgtaaccgtagtctgcaggtattcatcgtcagatcattgtatagtttgacaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0130600, RefSeq:Os06g0130600