Os06g0131300

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0131300| Description = Similar to Arginine decarboxylase (EC 4.1.1.19) (Fragment)| Version = NM_001063230.1 GI:115466191 GeneID:4340008| Le...")
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Gene Name

Os06g0131300

Description

Similar to Arginine decarboxylase (EC 4.1.1.19) (Fragment)

Version

NM_001063230.1 GI:115466191 GeneID:4340008

Length

2434 bp

Definition

Oryza sativa Japonica Group Os06g0131300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1673359..1675792

Sequence Coding Region

1673666..1675774

Expression

GEO Profiles:Os06g0131300

Genome Context

<gbrowseImage1> name=NC_008399:1673359..1675792 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1673359..1675792 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgcgctcgccgtggacgccgctgcacctgtcgcgcacgccttcgcgtgcgacgcggcgcgcttccccgcgccgctgctgggccccgccgccgcggctgcggcggtggcggagaagccggacgcggccgcgtggtcggccgacctctcgtccgcgctgtacaacgtggacggctggggcgcgccgtacttcttcgtcaacgacgacggcgacgtcgccgtgcgcccgcacggcgccgcaaccctgcccgggcaggagatcgacctcgccaaggtggtggccaaggccgccggcccgcgctccggcggcgggctcggcctgccgctccccctgctggtgcggttccccgacgtgctccgccaccgcgtggaggccctgaacgcggcgttcgactacgccgtgcgctccaccggctatggcgggaggtaccagggcgtgtaccccgtcaagtgcaaccaggaccgccacgtcgtggaggacattgtggagttcggcgagccgttccgcttcggcctggaggccggctccaagcccgagctgctgctcgccatgagctgcctcgccgcgcgcggcaacccggacgccctgctcatctgcaacggctacaaggacgacgagtacgtctcgctcgcgctcatcgcgcgcaccatggggctcaacacggtcatcgtgctcgagcaggaggaggagctcgacattgtggtcgacgctagccgccgcctcggcgtgcgcccggtggtcggcatgcgcgccaagctgcgcaccaagcacgccggccacttcggctccacgtccggggagaagggcaagttcggcctcaacgccgcgcagattctctccgtcgtcgccaagctcaagacccttggtatgctcgactgcctccagctcctgcacttccacattggctcccagatcccgaccactgctctgctcggcgatggcgtcggggaggccgcgcagatctactgcgagctcgcccgcctgggcgcggccatgcgcgtcatcgacgttggtggaggcctcggcattgactacgacgggagtcactcggcgcagaccgacatgtccgtggcatacagcttggaggagtacgcggcggccgtggtggccgccgtcggccgcgtctgtgaccgcaagggcgtcgcgcatcccatcatctgcagcgagagcggccgcgcgctggtgtcgcaccactctgtcctggtgttcgaggccttctcggcttcggcgcccggccgcattgacccggccacgggctacctgctcgacgagctcaccgacgactgccacgccgactaccgcaacctcatggccgccgcggtgcgcggcgacttcgacacctgcgctctgtacgccgaccagctgaagcggcgctgcgccgatcagttcaaggacggcgttcttggcctggagcacctcgccgcggtggacagcctctgcgagatcgtcgcccgcggcatgggcgccgccgagccgccgcgcacgtaccacatcaacctgtccgtgttcacctccctgccggacatgtgggcgatcgggcagatgttcccgatcatcccaatccagcgcctcggtgagcgccctgcggtcgacggcgtcctctccgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggcgggaggcacagcctgccgctgcacgagctccccgtccacggcacccgcggctactacctcggcatgttcctcggcggcgcctaccaggaggccctcggcggcctccacaacctgttcggcgggccgagcgtggtgcgcgtgtcgcagagcgacgggccgcactgcttcgccgtcacgcgcgcggcggcggggccgtcgtgcgccgacgtgctccgctcgatgcagcacgagcccgaggtgatgttcgaggtgctcaagcagaggaccgacggcgccaccgccgccgcgctcgccagggcgttcggcgcaatgccgtacctgtcgttcgacccggaggccgcggcgatggccagcggggagagcagcggcatgagcagcgactcggaggggtcggccgccggcgcggcggaggaggatgacgacgagtgggagttcatgcgggggctcaccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MPALAVDAAAPVAHAFACDAARFPAPLLGPAAAAAAVAEKPDAA AWSADLSSALYNVDGWGAPYFFVNDDGDVAVRPHGAATLPGQEIDLAKVVAKAAGPRS GGGLGLPLPLLVRFPDVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVE DIVEFGEPFRFGLEAGSKPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTM GLNTVIVLEQEEELDIVVDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNA AQILSVVAKLKTLGMLDCLQLLHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMR VIDVGGGLGIDYDGSHSAQTDMSVAYSLEEYAAAVVAAVGRVCDRKGVAHPIICSESG RALVSHHSVLVFEAFSASAPGRIDPATGYLLDELTDDCHADYRNLMAAAVRGDFDTCA LYADQLKRRCADQFKDGVLGLEHLAAVDSLCEIVARGMGAAEPPRTYHINLSVFTSLP DMWAIGQMFPIIPIQRLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHELPVHGT RGYYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTRAAAGPSCADVLRS MQHEPEVMFEVLKQRTDGATAAALARAFGAMPYLSFDPEAAAMASGESSGMSSDSEGS AAGAAEEDDDEWEFMRGLTV</aaseq>

Gene Sequence

<dnaseqindica>19..2127#tctccggtttgtgacgagatgcctgcgctcgccgtggacgccgctgcacctgtcgcgcacgccttcgcgtgcgacgcggcgcgcttccccgcgccgctgctgggccccgccgccgcggctgcggcggtggcggagaagccggacgcggccgcgtggtcggccgacctctcgtccgcgctgtacaacgtggacggctggggcgcgccgtacttcttcgtcaacgacgacggcgacgtcgccgtgcgcccgcacggcgccgcaaccctgcccgggcaggagatcgacctcgccaaggtggtggccaaggccgccggcccgcgctccggcggcgggctcggcctgccgctccccctgctggtgcggttccccgacgtgctccgccaccgcgtggaggccctgaacgcggcgttcgactacgccgtgcgctccaccggctatggcgggaggtaccagggcgtgtaccccgtcaagtgcaaccaggaccgccacgtcgtggaggacattgtggagttcggcgagccgttccgcttcggcctggaggccggctccaagcccgagctgctgctcgccatgagctgcctcgccgcgcgcggcaacccggacgccctgctcatctgcaacggctacaaggacgacgagtacgtctcgctcgcgctcatcgcgcgcaccatggggctcaacacggtcatcgtgctcgagcaggaggaggagctcgacattgtggtcgacgctagccgccgcctcggcgtgcgcccggtggtcggcatgcgcgccaagctgcgcaccaagcacgccggccacttcggctccacgtccggggagaagggcaagttcggcctcaacgccgcgcagattctctccgtcgtcgccaagctcaagacccttggtatgctcgactgcctccagctcctgcacttccacattggctcccagatcccgaccactgctctgctcggcgatggcgtcggggaggccgcgcagatctactgcgagctcgcccgcctgggcgcggccatgcgcgtcatcgacgttggtggaggcctcggcattgactacgacgggagtcactcggcgcagaccgacatgtccgtggcatacagcttggaggagtacgcggcggccgtggtggccgccgtcggccgcgtctgtgaccgcaagggcgtcgcgcatcccatcatctgcagcgagagcggccgcgcgctggtgtcgcaccactctgtcctggtgttcgaggccttctcggcttcggcgcccggccgcattgacccggccacgggctacctgctcgacgagctcaccgacgactgccacgccgactaccgcaacctcatggccgccgcggtgcgcggcgacttcgacacctgcgctctgtacgccgaccagctgaagcggcgctgcgccgatcagttcaaggacggcgttcttggcctggagcacctcgccgcggtggacagcctctgcgagatcgtcgcccgcggcatgggcgccgccgagccgccgcgcacgtaccacatcaacctgtccgtgttcacctccctgccggacatgtgggcgatcgggcagatgttcccgatcatcccaatccagcgcctcggtgagcgccctgcggtcgacggcgtcctctccgacctcacctgcgacagcgacggcaaggtcgaccacttcatcggcgggaggcacagcctgccgctgcacgagctccccgtccacggcacccgcggctactacctcggcatgttcctcggcggcgcctaccaggaggccctcggcggcctccacaacctgttcggcgggccgagcgtggtgcgcgtgtcgcagagcgacgggccgcactgcttcgccgtcacgcgcgcggcggcggggccgtcgtgcgccgacgtgctccgctcgatgcagcacgagcccgaggtgatgttcgaggtgctcaagcagaggaccgacggcgccaccgccgccgcgctcgccagggcgttcggcgcaatgccgtacctgtcgttcgacccggaggccgcggcgatggccagcggggagagcagcggcatgagcagcgactcggaggggtcggccgccggcgcggcggaggaggatgacgacgagtgggagttcatgcgggggctcaccgtgtgaccgaggcagccatcgccggcttcttggtgttcacgcgaggagttcttgcacctccttctcctcctccattgtacctgtcgcactgagcagtcgtcgtcgccgtcgtgttcgtcgccgtcgccgacggtaatctccacccagtgtgtggttgtatcgtgtcatggtcgttgtcgtcgggcgtctcgtcgccgtagtctcgccggagtttctggcgccacctttttatttcgcaagcgtcagtgtccactgtttcgctctccttttgaaatttcatcagagaataagatgaggaacaaataagtttcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0131300, RefSeq:Os06g0131300