BGIOSGA024124

From RiceWiki
Revision as of 16:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024124

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024124, complete gene.

LocusTag

OSJNBB0041B22.104

Ensembl Transcript ID

BGIOSGA024124-TA

Ensembl Protein ID

BGIOSGA024124-PA

Length

4597

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19917114..19921710

Sequence Coding Region

19920384..19921710,19918724..19918846,19918406..19918611,19918087..19918297,19917764..19917998
,19917519..19917669,19917114..19917434

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19917114..19921710 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19917114..19921710 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGGCTGCGGCGAGCGCCATGCGGCCATTAGCTCCCCTCTTCCTTTTCTTCTTCTTCTCCCTTGCCGCCTCCGCGAGTGACAACATTCTTGCCAACTCATCTCTCGCCGATGGCCAGAAGCTTGTCTCGGCCGGTGGGGTCTTCGAGCTCGGGTTCTTCACCCCGCCGGGCTCGACGACGGCGGCGAGGTTCTTGGGAATATGGTACAGGGACATCGATCCGCCGACCGTGGTGTGGGTGGCCAACCGGGATGCTCCGGTGAGCGGCACGGCCGGGAGCTTGGCTGTCGTCGTCAACGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTCGTCTGGTGCTCGGCGATGGGTCGGGGCGCGTGGTGTGGTCGTCGGCGCCGTCGAACGTAACCGCGAGTGATCCGGTGGCGGCGAGGCTGTTGGATAGTGGCAACTTCGTGCTCGCCGGCGGCGGTGGCGCCGGGGATGTGATCTGGCAGAGCTTCGATTACCCGTCGGACACTCTGCTCCCCGGCATGAAGTTTGGGTGGGACCTCACCACCGGGCTCGACCGCTACCTGACGACGTGGAGGAGCGCCGGCGACCCGTCGCCGGGCGACTACACGTTCAAGATCGACCCGCGCGGCGCGCCGGAGGGGTTCATCTGGTACAACGGCACGTCGCCGGTGTACCGGAACGGGCCGTGGGACGGGCTGCAGTTCAGCGGCGAGCCGGAGATGGAGCCCAACAACACCAGCTTCCGCTTCGAGTTCGTCGCCAACCGCACCGACGTCTACTACACCTTCGTCGTCGACGGCGGCGGCGGCGGCGGAGTCCTCTCGAGGTTCGTGCTGAACCAGTCGAGCGCGCAGCGGTACGTGTGGCTGCCGCAGGCCGGCGGGTGGAGCCTCTACTGGTCGCTGCCGCGGGACCAGTGCGACCAGTACGCGCACTGCGGCGCCTACGGCGTCTGCGACGTCGGCGCCGCGTCGATGTGCGGCTGCCCGGCCGGGTTCGCGCCGGCGTCGCCCAGGAACTGGGAGCTCAGGGACAGCTCCGCCGGGTGCGCGCGGCGGACGCGGCTCAACTGCACGGGCGACGGGTTCCTGCCGCTGCGCGGCGTGAAGCTTCCCGACACCACCAACGCGACGGTGGACGCGGCCATCGCCGTCGACCAGTGCAGGGCGAGGTGCCTGGCCAACTGCTCCTGCGTGGCGTACGCCGCGTCCGACGTCAGGGGAGGCGGGAGCGGCTGCATCATGTGGAGCTCGCCGCTCGTGGACATCAGGAAGTTCTCCTATGGCGGCGAGGACCTGTTCATGCGTCTCGCCGCATCCGATTTGCCAACCAATGGGGATGATTCCAGCAGGAAAAACACAGTGCTCGCTGTTGTCCTAAGCCTATCTGGTGTTGTTCTTCTGGCGTTGGCTGCATTCTTCGTCTGGGACAAGTTATTCAGAAACAAAGTGAGATTTCAGAGTCCTCAAAGGTTCACCTCATTTGACTCAAGTATCCCTCTGAATCAAGTCCAAGACAGGAAAATGGAGGATGAAACCAGGCACAGCAACGAATTGAATGTCACTCTCTTTGACTTCAACACGATAGCCTTCTCCACTGACAATTTCGCGAACTTGGCTAAGCTCGGTGAAGGTGGTTTTGGTCCTGTCTACAAGGGAGAATTGGATGGAGGGCAGACAGTGGCAGTGAAGAGGCTGTCGAAATTCTCGACGCAGGGGCTGGACGAGTTCAAGAACGAGGTCATGCTCATCGCGAGGCTCCAGCATGTGAACCTTGTCAGGCTTCTCGGCTGCTGCATCCATGGCGAGGAGAGGATGCTGGTGTACGAGTACATGGAGAACAAGAGCCTCGACAACTTCATCTTCGACAAGGCTCGATCAGCTCAGCTGAACTGGTCGAAGCGATTCAACATCATACTCGGCATCGCACGGGGCCTCCTGTATCTGCACCAGGACTCCCGATTCAAAATCATCCACAGGGATCTCAAGGCCGGCAACATCCTGCTCGACGGAGACATGAACCCCAAGATCTCCGACTTCGGCGTCGCGAGGATCTTCGGCGACGACACCGACTCGCACACCAGAAAAGTCGTCGGGACATATGGGTACATGTCGCCGGAGTACGCGATGGACGGCGTGTTCTCGGTGAAGTCCGACGTGTTCAGCTTCGGCGTGCTGGTGCTGGAGCTCGTCAGCGGCCGGAAGAACCGCGGGATGTACAGCAGCGGCGAGCAGACGAGCCTGCTCAGCCACGCGTGGAGGCTGTGGAGGGAGGGCAACGCGCTGGCGCTGCTCGACGAGGCGGTGGCCGGCGGCGGCGGCGGCGGGTACAGCAGGTCGGAGGTGCTGCGGTGCGTGCAGGTGGGGCTCCTGTGCGTGCAGGAGCGGCCGGAGGACCGGCCGCACATGGCGGCGGTGTTCATGATGCTGGGCAACCTCAGCGCGGTGGTGCCGCAGCCGAGGCACCCGGGCTTCTGCAGCGACCGCGGCGGCGGCGGCGGCTCGACCGACGGCGAGTGGTCGTCCACGTGCACCGTCAACGACGTCACCGTCACCATCGTCGAAGGCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAMAAASAMRPLAPLFLFFFFSLAASASDNILANSSLADGQKLVSAGGVFELGFFTPPGSTTAARFLGIWYRDIDPPTVVWVANRDAPVSGTAGSLAVVVNGGGGGGGGGGRLVLGDGSGRVVWSSAPSNVTASDPVAARLLDSGNFVLAGGGGAGDVIWQSFDYPSDTLLPGMKFGWDLTTGLDRYLTTWRSAGDPSPGDYTFKIDPRGAPEGFIWYNGTSPVYRNGPWDGLQFSGEPEMEPNNTSFRFEFVANRTDVYYTFVVDGGGGGGVLSRFVLNQSSAQRYVWLPQAGGWSLYWSLPRDQCDQYAHCGAYGVCDVGAASMCGCPAGFAPASPRNWELRDSSAGCARRTRLNCTGDGFLPLRGVKLPDTTNATVDAAIAVDQCRARCLANCSCVAYAASDVRGGGSGCIMWSSPLVDIRKFSYGGEDLFMRLAASDLPTNGDDSSRKNTVLAVVLSLSGVVLLALAAFFVWDKLFRNKVRFQSPQRFTSFDSSIPLNQVQDRKMEDETRHSNELNVTLFDFNTIAFSTDNFANLAKLGEGGFGPVYKGELDGGQTVAVKRLSKFSTQGLDEFKNEVMLIARLQHVNLVRLLGCCIHGEERMLVYEYMENKSLDNFIFDKARSAQLNWSKRFNIILGIARGLLYLHQDSRFKIIHRDLKAGNILLDGDMNPKISDFGVARIFGDDTDSHTRKVVGTYGYMSPEYAMDGVFSVKSDVFSFGVLVLELVSGRKNRGMYSSGEQTSLLSHAWRLWREGNALALLDEAVAGGGGGGYSRSEVLRCVQVGLLCVQERPEDRPHMAAVFMMLGNLSAVVPQPRHPGFCSDRGGGGGSTDGEWSSTCTVNDVTVTIVEGR</aaseq>

Gene Sequence

<dnaseqindica>1..1327#2865..2987#3100..3305#3414..3624#3713..3947#4042..4192#4277..4597#ATGGCCATGGCTGCGGCGAGCGCCATGCGGCCATTAGCTCCCCTCTTCCTTTTCTTCTTCTTCTCCCTTGCCGCCTCCGCGAGTGACAACATTCTTGCCAACTCATCTCTCGCCGATGGCCAGAAGCTTGTCTCGGCCGGTGGGGTCTTCGAGCTCGGGTTCTTCACCCCGCCGGGCTCGACGACGGCGGCGAGGTTCTTGGGAATATGGTACAGGGACATCGATCCGCCGACCGTGGTGTGGGTGGCCAACCGGGATGCTCCGGTGAGCGGCACGGCCGGGAGCTTGGCTGTCGTCGTCAACGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTCGTCTGGTGCTCGGCGATGGGTCGGGGCGCGTGGTGTGGTCGTCGGCGCCGTCGAACGTAACCGCGAGTGATCCGGTGGCGGCGAGGCTGTTGGATAGTGGCAACTTCGTGCTCGCCGGCGGCGGTGGCGCCGGGGATGTGATCTGGCAGAGCTTCGATTACCCGTCGGACACTCTGCTCCCCGGCATGAAGTTTGGGTGGGACCTCACCACCGGGCTCGACCGCTACCTGACGACGTGGAGGAGCGCCGGCGACCCGTCGCCGGGCGACTACACGTTCAAGATCGACCCGCGCGGCGCGCCGGAGGGGTTCATCTGGTACAACGGCACGTCGCCGGTGTACCGGAACGGGCCGTGGGACGGGCTGCAGTTCAGCGGCGAGCCGGAGATGGAGCCCAACAACACCAGCTTCCGCTTCGAGTTCGTCGCCAACCGCACCGACGTCTACTACACCTTCGTCGTCGACGGCGGCGGCGGCGGCGGAGTCCTCTCGAGGTTCGTGCTGAACCAGTCGAGCGCGCAGCGGTACGTGTGGCTGCCGCAGGCCGGCGGGTGGAGCCTCTACTGGTCGCTGCCGCGGGACCAGTGCGACCAGTACGCGCACTGCGGCGCCTACGGCGTCTGCGACGTCGGCGCCGCGTCGATGTGCGGCTGCCCGGCCGGGTTCGCGCCGGCGTCGCCCAGGAACTGGGAGCTCAGGGACAGCTCCGCCGGGTGCGCGCGGCGGACGCGGCTCAACTGCACGGGCGACGGGTTCCTGCCGCTGCGCGGCGTGAAGCTTCCCGACACCACCAACGCGACGGTGGACGCGGCCATCGCCGTCGACCAGTGCAGGGCGAGGTGCCTGGCCAACTGCTCCTGCGTGGCGTACGCCGCGTCCGACGTCAGGGGAGGCGGGAGCGGCTGCATCATGTGGAGCTCGCCGCTCGTGGACATCAGGAAGTTCTCCTATGGCGGCGAGGACCTGTTCATGCGTCTCGCCGCATCCGATTTGCGTATGATTCTCCTCTCCTCTCTAGTTCGTATGCCATATACTTTCCTTCGTTTTTAATAGACGAGGTCATTAATTTTAAACACATTTTAACCATTTGACTTATTAAAAAAATTGTACGAATGTAGAAAATAAAAATTATGGTTAAAGTATTTTTAAAAAAAGAACTTAAAAATAAATAATAATTATATAAATTTTTAAATAAGATAGATAGTAAAACATGTGTTTGAAAGTCAATGGTGTCATTGAAAAAAGTGGTAGTATTATGTAATTATTTCACTACACTTACAACATAACTTTTGAGGATGTAGTATGTTTTTTAATATAAAAAGTGATAGGTACATTAGTGGTCATAGAACTATTAGACAAATTTGATCAACTTAGACCGTATGTAACATCTTCATATATACGATTTTCTTAAAGCTAGGTATTACTAGTTCTCAAAATCCATGGATCCATAATTATGATTATACTGATGAAATTTGAATAAACTATTTTGCTTATATTAGAGAAATATAAAAATTTAAACCCTTGTACAACCTAAAAATCCAACATGATCTAGGATCTATAGATGTGTCAAATAGAATAGGGTCTTAGTCATCTGTTTGGTTACAACCACAATTATGATAAGATTTTCTTTTAACAAACTATCTCACATGTGTTTGTTTACTCAAAAAAGTGTTGGCAATGATATTTTTAGACTTGCTATGGTGTGACAAGGATTTTAAGCACCTACCTTATATTAAGCATGTTTGGTAGCTTTTGTTGATAAATGGTGGCAACCAAATAGGCCATAATAAGTAAAGTTAAGGTATAGCAGATATTATTCGCTTAAAAAAGAATGTTTCAAGAAAACATCAGATATGTTCTGTCATACCTACATGATTTAATTTGCGTATATATATGTTAATTTGATGTAGAACAATATTGTAAAGAATCTGCAGTCTTAGTATAATTCAACCGTTTTGTCCTAGTAAAGACTGAATGAATTGCTTGGATTCGTCTCAAGAATGAATTGAAGTCTTTCTATAGAGAAAATCAGTCTTATTGTTCTATCTGATGTCCTGTGTGGTCACAATGCGCTGATCAGAAATGGTTCTTTAATTTGGCCTGAAGCGACTGTCCTGTACCTAAATCGAAGACATGCAGACTTTTGGTTTGCACTTGTTGCTTTCGTGGACAAGCACCTAAGATTGCTAGTTGTCATATTTATTTTGGATCTTGTTCTTAATTTTACATGGATTATCACTTCCATTATTTTTGGTGTTGGAAATCACGTTTGGCAGCACGAACCTTTCAGTGGTGTACCTGAAATTTGAAAAAAACATTGTCAGTACTAAAAAATCGTCGATAATCATTAAAGAAAGGGGAACTACTAAATCAAGGGGTTACTTGGTTTCAAAGCAAGATCTTCAGTCAATCTTCTACTAGCTGTTTCTGTAGTACAAACTTCACCTATCAGTCAAGCACAACTAATTTTTTAAAATATCTTCTAGTACATCTAATTTGACTTGCTGACACCTCCAAGATGACTCTGACAGCAACCAATGGGGATGATTCCAGCAGGAAAAACACAGTGCTCGCTGTTGTCCTAAGCCTATCTGGTGTTGTTCTTCTGGCGTTGGCTGCATTCTTCGTCTGGGACAAGTTATTCAGAAACAAAGGTTCTTCCAACTCCCAAGTCTTCCTTCTTCTGTCTGTCTGACAGGAGAAAAATGAGCATTTTTCAGTTAATCCATGTGCTAACCTGAATACTAACTACAGTTGCAAATCCAGTGAGATTTCAGAGTCCTCAAAGGTTCACCTCATTTGACTCAAGTATCCCTCTGAATCAAGTCCAAGACAGGAAAATGGAGGATGAAACCAGGCACAGCAACGAATTGAATGTCACTCTCTTTGACTTCAACACGATAGCCTTCTCCACTGACAATTTCGCGAACTTGGCTAAGCTCGGTGAAGGTGGTTTTGGTCCTGTCTACAAGGTAAAAAAAAACATAAAAAAATCAAGGCAGATACATTTCTGATATCACACACATTGGTGATTTTGATTGAAAATTTGAGAACAATTTGCATGATGCGAAATTCATCAGGGAGAATTGGATGGAGGGCAGACAGTGGCAGTGAAGAGGCTGTCGAAATTCTCGACGCAGGGGCTGGACGAGTTCAAGAACGAGGTCATGCTCATCGCGAGGCTCCAGCATGTGAACCTTGTCAGGCTTCTCGGCTGCTGCATCCATGGCGAGGAGAGGATGCTGGTGTACGAGTACATGGAGAACAAGAGCCTCGACAACTTCATCTTCGGTACTGAACACCCAGATAATTGCCTGAACATTTTTGGCGCCATATTGATTCATTGCAGATGAAATTTGATGGGTGTGATTTTGTGCAGACAAGGCTCGATCAGCTCAGCTGAACTGGTCGAAGCGATTCAACATCATACTCGGCATCGCACGGGGCCTCCTGTATCTGCACCAGGACTCCCGATTCAAAATCATCCACAGGGATCTCAAGGCCGGCAACATCCTGCTCGACGGAGACATGAACCCCAAGATCTCCGACTTCGGCGTCGCGAGGATCTTCGGCGACGACACCGACTCGCACACCAGAAAAGTCGTCGGGACATAGTGAGCACGACACTGACTCTGATGATCTTCAGATATACTCTACTACATAGCTGCTAAATTCTGAGCTGTGATGGTAACAACGGCGAATCGGCAGTGGGTACATGTCGCCGGAGTACGCGATGGACGGCGTGTTCTCGGTGAAGTCCGACGTGTTCAGCTTCGGCGTGCTGGTGCTGGAGCTCGTCAGCGGCCGGAAGAACCGCGGGATGTACAGCAGCGGCGAGCAGACGAGCCTGCTCAGCCACGTAAGCAGCGATCAAGAATTCGAAAAAGTTCGCTGAAAATTTGCTCGAGAACTGATCGAAACGTGCGTGCGTGCGCGGATGCAGGCGTGGAGGCTGTGGAGGGAGGGCAACGCGCTGGCGCTGCTCGACGAGGCGGTGGCCGGCGGCGGCGGCGGCGGGTACAGCAGGTCGGAGGTGCTGCGGTGCGTGCAGGTGGGGCTCCTGTGCGTGCAGGAGCGGCCGGAGGACCGGCCGCACATGGCGGCGGTGTTCATGATGCTGGGCAACCTCAGCGCGGTGGTGCCGCAGCCGAGGCACCCGGGCTTCTGCAGCGACCGCGGCGGCGGCGGCGGCTCGACCGACGGCGAGTGGTCGTCCACGTGCACCGTCAACGACGTCACCGTCACCATCGTCGAAGGCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024124