Os06g0132500

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0132500| Description = Alpha/beta hydrolase family protein| Version = NM_001063237.1 GI:115466205 GeneID:4340016| Length = 5127 bp| Defini...")
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Gene Name

Os06g0132500

Description

Alpha/beta hydrolase family protein

Version

NM_001063237.1 GI:115466205 GeneID:4340016

Length

5127 bp

Definition

Oryza sativa Japonica Group Os06g0132500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1736382..1741508

Sequence Coding Region

1736382..1736730,1739924..1740129,1740474..1740853,1740944..1741508

Expression

GEO Profiles:Os06g0132500

Genome Context

<gbrowseImage1> name=NC_008399:1736382..1741508 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1736382..1741508 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccggcgccggcgacgttgccgccagctggagggtggcggcggtggcgctcctcggcgcggtgaactgcgtggtgagcttcgtggtgttctcgttcttggatttgctggatatggtgctgtgcgtggtgtacaaggtggtggactacgcggtggaggcggagtggaaggcgtgctactgctcggcggcggcgcgggacggcgccgccgccgccatcttcgtgccgccggcgtcggcgtcggccgcgccggggccgaaggtggtgcggctgtcgccgtcgtcggcgaagatgcagctggaggacgtctccgacacgctgtacgtgcgcccctcgctgctgtcggacgccaccaagaagtccggccccgccgcgccgtcgctcacggtgagccccgccatcgccgagctcatccgcggcaagatcggccgcgccgccccgcgcccgccgcgccacgccgccccctgctggtccgactgcgactgcaaggtctgccactcatggagcgcctcctcccgctcctcccacctctacgtccacgtccaatccccgaccaccgcaagtggagtggagacggaggacgtggtgttcgtccacgggttcatatcgtcgtcggtgttctggacggagacggtgttcccggcgttcagcgaggcggcgaaggggaggtaccggatgttcgccgtcgacctgctggggttcggccggagcccgaagccggcggactcgctctacacgctccgggagcacgtcgagatgatcgagcgctccgtgctccagcgctaccgcctccgcaagttccacgtcgtcgcccactcgctcggctccgtcctcgccctcgccctcgccgtcaaataccccgacgccgtccagtccctcaccctcctcgctccggtaagccgccgcccgccgcccatcaccctcaccgccggcgaggtgacaccgtacttcccggtgccggaggaggaggcgggggcggcgacgcagtacgtgatgcggcgggtggcgccgcggcgggtgtggccgccgatcgcgttcggggcgtcgatggcgtgctggtacgagcacgtcagccggaccatctgcctcaccatttgcaggcaccaccgcacctgggatcgcctcttcaggctcttcacccgcaacaggatgaggacgttcttgatcgaggcgttcatgtgccacacgcacaacgcggcgtggcacacgctgcacaacatcatctgcggcagcgccggcaagatggacagctacctcgacgtcgtcgccggccagctcgcctgcgaggtcgccgtcttccacggccgcgacgacgagctcctccccgtcgagtgcaccctcgccgtcggcgccagggtgccccgggcgcgcgtcaccgtctacgaccacaaggaccacatcaccatcatcgtcggccaggagaagctcttcgccaccgagctcgaagacatctggcgccggagcgccgccgccgccgccgccggcgacggcgagtag</cdnaseq>

Protein Sequence

<aaseq>MGAGAGDVAASWRVAAVALLGAVNCVVSFVVFSFLDLLDMVLCV VYKVVDYAVEAEWKACYCSAAARDGAAAAIFVPPASASAAPGPKVVRLSPSSAKMQLE DVSDTLYVRPSLLSDATKKSGPAAPSLTVSPAIAELIRGKIGRAAPRPPRHAAPCWSD CDCKVCHSWSASSRSSHLYVHVQSPTTASGVETEDVVFVHGFISSSVFWTETVFPAFS EAAKGRYRMFAVDLLGFGRSPKPADSLYTLREHVEMIERSVLQRYRLRKFHVVAHSLG SVLALALAVKYPDAVQSLTLLAPVSRRPPPITLTAGEVTPYFPVPEEEAGAATQYVMR RVAPRRVWPPIAFGASMACWYEHVSRTICLTICRHHRTWDRLFRLFTRNRMRTFLIEA FMCHTHNAAWHTLHNIICGSAGKMDSYLDVVAGQLACEVAVFHGRDDELLPVECTLAV GARVPRARVTVYDHKDHITIIVGQEKLFATELEDIWRRSAAAAAAGDGE</aaseq>

Gene Sequence

<dnaseqindica>4779..5127#1380..1585#656..1035#1..565#atgggcgccggcgccggcgacgttgccgccagctggagggtggcggcggtggcgctcctcggcgcggtgaactgcgtggtgagcttcgtggtgttctcgttcttggatttgctggatatggtgctgtgcgtggtgtacaaggtggtggactacgcggtggaggcggagtggaaggcgtgctactgctcggcggcggcgcgggacggcgccgccgccgccatcttcgtgccgccggcgtcggcgtcggccgcgccggggccgaaggtggtgcggctgtcgccgtcgtcggcgaagatgcagctggaggacgtctccgacacgctgtacgtgcgcccctcgctgctgtcggacgccaccaagaagtccggccccgccgcgccgtcgctcacggtgagccccgccatcgccgagctcatccgcggcaagatcggccgcgccgccccgcgcccgccgcgccacgccgccccctgctggtccgactgcgactgcaaggtctgccactcatggagcgcctcctcccgctcctcccacctctacgtccacgtccaatccccgaccaccgcaagtaatccacacacacaccacctctacgtcgatcgccggagctgaagaagacgatcgatgtgcttaaccttaacatgaatgcgaattgcaggtggagtggagacggaggacgtggtgttcgtccacgggttcatatcgtcgtcggtgttctggacggagacggtgttcccggcgttcagcgaggcggcgaaggggaggtaccggatgttcgccgtcgacctgctggggttcggccggagcccgaagccggcggactcgctctacacgctccgggagcacgtcgagatgatcgagcgctccgtgctccagcgctaccgcctccgcaagttccacgtcgtcgcccactcgctcggctccgtcctcgccctcgccctcgccgtcaaataccccgacgccgtccagtccctcaccctcctcgctccggtaagccgccgcccgccgcccatcaccctcaccgccggcgaggtgacagtgagatcactgacacttcacttcatcaattcttgcatggctagatatgcatgtgaatccatcaccctaactaactccagtccactttatacattttgaccaacttgcccagtacatttccacgaaagagaacacatgttcccatcataaatcatcacactatcactttaatttattttcgtcgctttaattggtttaccggtagtgactagtttactttcaaggcactacatgattaatttggaccgatcgagttgggttttctaaaaaaaaataatagaatttgatttgaaccctgatggatagagcgagattgctaacgctatggtgaacgtggtgaatagccgtacttcccggtgccggaggaggaggcgggggcggcgacgcagtacgtgatgcggcgggtggcgccgcggcgggtgtggccgccgatcgcgttcggggcgtcgatggcgtgctggtacgagcacgtcagccggaccatctgcctcaccatttgcaggcaccaccgcacctgggatcgcctcttcaggctcttcacccgcaacaggtaaaccccacacttcccttcttaactatataaatattttctaactatatactccctccgtcgtataatataaggattttgggtggatgtgatattccagtacaacgaatctggacacacggtctgttcagattcattgtattagaatgtgtcacatctattcaaaatcccttatattatgggacggaggaaatagtactttctccaccttttaattatgtaagttagaaatggttagtattttttagtgttctatctccatttttttcttttaaattctgctttcttgcagccacctggctgtctgttctgctgtcctgcactcctgcatgctctgaccttctcttctatattctgtatttaaaaaacgaacttattttactttaattttggggaaatgaggggtttttaaaaacattttttgggtattgaattcgtgtgaaatgggtagatgagcaagaacagctgtgcgacagctagtgtgagccttctactcatgctggctactcaagttttctctggttgacgtactacgtccttttgatcggtttcttgccgttgccctgctttgtatgatgcccttttcttccctgtcctaaacgtacacttcatccagtactaaatgttaatccaaaagaagagtttacctgtacctttttgctcgtgaaaagttcagaatttgaataagatggagtattagcagcaaaagcagagattaaattaaggcgaccaccattccattttcctgtaagaaatagagagaaattaatcaaacagatcagacgacagcgaccttggacagtgtcagtgctcgagccataacccaaaattatgccattctctccatccatccatcgatcgatcgctgtcgcctgcttaaatgatcgacctccaatgttgttctctgacaataggttcacgtttgtcgtccttcagaattaataccccgcgattccagctaatccgatcataataagcaacctagctacagttctgacgaagaactccgctactgtaccagacgcagttggtggcaggcaggcaggcaggccggcaccgtcagtttgctgtacctgtaccacatgctggctaactcacccaagccgagtttgcagcaatggccgtcttgatggagaaactcatttcgttcgtacgcatcatgcagaattgcagacgatgattttctcctcttcgccatgacaacgatggatggagaacagtactacgggcaggagagggttttcgcgtagatggagagagcttagggacgtgcctaaaatggcggtggctcactgcaccgtcataaaccattctgtcatgacccacaggctatttgtcgacaaatcataggaaacaattctgcatattgcttcagaatctggaaagctagtgaactcatcgttttttatattctgcacaaaagaaatctgatctgaaaaaaaatagaatttatctcctcttttactgaagttttgagatttttacctctgaagactgcggtttcttcagtaggttgaacagtttcacaatctattttttttaattaagagaaattttactgtttttgagaaaatatctgaagatacctaaattttacactaaaaaaattaataccttgaaatacctacaatggaaaatgtggtataccttctcaagaatggtaaaattaactttattaaagttcaagaaaaacttcagttctttgcacccgtttttccatgctgtcctatacatacgcgcagctggagagagattaatactgaaccattgattgatcaatttaaggagttgtgtttttcatggagaaaatttggaaactctgcacgtttctttcggccttggttctgaagaagaggcgtccatttgcccggaatcagttagctaggctttgccgttttgcaggatagattgtgtgtgtggtgtgttcacgggaagaaacgtaagcagaggaggcgtgcagttggggcgatggtaactagcatgcaatggctagtaccatacaccttctcttaaatgtttttcggttgtgaaatcgtatggctgatcgatcgactcacctaacaacatttcttgattccaaagggccaccttttctcaattatttctccaaaaaccttttctcaagtattcagacatctccagctagctgttgaagaaacggtagtgaagctgaaaatatctgaagttcttaactttgtacttagtgctgcatgatctaccacacaggataataaattctgaaaaatgcatggaaggtataattaactagctagaggtagctttgcatattggtagttaccattgtttttctcttaggtatagtttttttccctcttccaaatcatagattatcgcgaacacactttccaagcccctggaagacgcaaatatttgaaaactttatatatataagttgcttaggttattttaaaataacttttcaactttgcactaatagttaattcaatcggttgtaccctcgaatgtcatcagacaatgagataatgcatcatttacttatctattgagaacaatcaaactgggccacagtgtggcagtagcagtcagtcgaagcaacatgagtgatgagtagcatgtacagtagctagtgtactaagctggaaggttacccacaagtttaggacacacacacaaacacacaatgtggggttgccatgggccatcgcaatggtgccatccacagttccacacaccacttgcatatatgctactagcatgttggcatggcctgccagagagatctagcagttaagttggttcgaagttgccaccaccatttttattactggattgtgcaagtacagcgaagtgtaatgagttatggccagccatggtgggtagcaagtgctgccatggcaaagatcttcttcttccctggcagttcgtccctctgtctcactgtcgatcatcagtgaattgcactgtgctgtctgactgaatccatcactgaatgttgatgatgaaagtgtatgcgagttaacgcgataattagattgatcacggacacgagtacatatagggaccgtacattcttatctttataaccgacttatagaaacataatcaggataagattaggaaaccaaacaggatacagtacaatatctataacagatgagttcgatcgatccatggcgaattaattgatgtgaggttggtggtggtggtgcaggatgaggacgttcttgatcgaggcgttcatgtgccacacgcacaacgcggcgtggcacacgctgcacaacatcatctgcggcagcgccggcaagatggacagctacctcgacgtcgtcgccggccagctcgcctgcgaggtcgccgtcttccacggccgcgacgacgagctcctccccgtcgagtgcaccctcgccgtcggcgccagggtgccccgggcgcgcgtcaccgtctacgaccacaaggaccacatcaccatcatcgtcggccaggagaagctcttcgccaccgagctcgaagacatctggcgccggagcgccgccgccgccgccgccggcgacggcgagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0132500, RefSeq:Os06g0132500