Os06g0134000

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0134000| Description = Similar to 40S ribosomal protein S20| Version = NM_001063248.2 GI:297605123 GeneID:4340027| Length = 1916 bp| Defin...")
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Gene Name

Os06g0134000

Description

Similar to 40S ribosomal protein S20

Version

NM_001063248.2 GI:297605123 GeneID:4340027

Length

1916 bp

Definition

Oryza sativa Japonica Group Os06g0134000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1819114..1821029

Sequence Coding Region

1819325..1819467,1820587..1820700,1820803..1820932

Expression

GEO Profiles:Os06g0134000

Genome Context

<gbrowseImage1> name=NC_008399:1819114..1821029 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1819114..1821029 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgacgtggcgtacgcgccgccgatgaagtccggcaagatcggcttcgagagctcgcaggaggtgcagcacaggatccgcatcaccctctcctccaagagcgtcaagaacctcgagaaagtctgcggtgatctggtgaagggagccaaggacaagagcttgaaggtgaagggccccgtgcggatgcccaccaaggtgctccacatcaccaccaggaagtctccttgtggagaaggtaccaacacctgggatcggtttgagatgcgggtgcacaaaagggtgattgatcttgtcagctctgcagatgttgtcaagcagatcacctcaatcaccattgagccaggtgtggaggttgaagtgaccatcagcgaccagtaa</cdnaseq>

Protein Sequence

<aaseq>MAAADVAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKV CGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVS SADVVKQITSITIEPGVEVEVTISDQ</aaseq>

Gene Sequence

<dnaseqindica>1563..1705#330..443#98..227#gaaaacctagatccccatctcgcgccgccacctctccccctcctccatccgcgaggcgaaaccctagccgaggacctcctccccttccgcgccagccatggcggccgccgacgtggcgtacgcgccgccgatgaagtccggcaagatcggcttcgagagctcgcaggaggtgcagcacaggatccgcatcaccctctcctccaagagcgtcaagaacctcgagaaaggtaaaccctctttgtgatttctcgttttgtggtgatggggtttatgtgcgacatttgatctgatgattggtgttggattggatgtgtgttgcgtgggggcagtctgcggtgatctggtgaagggagccaaggacaagagcttgaaggtgaagggccccgtgcggatgcccaccaaggtgctccacatcaccaccaggaagtctccttgtggagaaggtgacatttcttctcgagatgatctggcttgtctgttgatggttttgttaggttgtgtagaacagttgtctatgatttgtcatgttgatgatgatctgctgagcagatgatgttaaatactagttgatcactgagatcttgatctttgatgtctaaaaaaatcgagctttttaaaactgatgcttagcatatcatcatcatcttcaattgtgttgtttgttaggagttagcattgccttgattaaagcattttagatgagagctgagttgttagttgtaggccgagcatgtgatgttacaaggagatgctactgagatgttatatcgttgaagtctctaaaaccgagctttttaaaactgatgcttggccttgtaatagcaagtgtagtgtggatggttttatggttattgcatggtttctgctaaacttactggcgatgctgataagtttgagtatattgctacgattttgtacttggtatggaattgctgatatgaaatcttcttttaggaccttatgcttgttctgtctgaattaatattgtttttaatgtggttattgttctatgatgggctggccaaatgatgctaaaatatgtttttgctgagtctttctttgaagactaacaaaatcgagctttttaaaactgatggttggcctatccaatgcttggtaattatttgtccaaatactgacctttttgggttaatgacttagttgcttcttagtacttctttgtaccatgcactactatttttttccacattgcatggcaaacctgcacctgaatgttttaatgattgtatatttctggacatgttgagcagatgatgatatattatgtttgtactgatttatttgatgtctaaaaatcgagctttttaaaactgatgctcagccttgaagtaataatgtgaaccccttgtttgcaattattttatcactatagttggagcatttctcttttgcaagttgtggtgctcttatttacctgttgaaactgtatttgtttccactctagttgtatagaaacatcaatgcaatatttttagttgccctctttgttctgcatctcccatgggcggttggaaatgttaatgatgtaaacattgtttcaggtaccaacacctgggatcggtttgagatgcgggtgcacaaaagggtgattgatcttgtcagctctgcagatgttgtcaagcagatcacctcaatcaccattgagccaggtgtggaggttgaagtgaccatcagcgaccagtaaaatgctgctatccaacaggtggagaaattcggtgaacagggtagggtatttcagaaagtttttagcatgagaacactggtggaacagagtttttgttcatctataggctctcggcggttaattccgaccatctgttatctaagctatcataaatcttgtgactcatgtctgttccaacatatgctataaatgaatgactcgctaaagatct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0134000, RefSeq:Os06g0134000