BGIOSGA024269

From RiceWiki
Revision as of 16:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024269

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024269, complete gene.

LocusTag

OS07G0498400

Ensembl Transcript ID

BGIOSGA024269-TA

Ensembl Protein ID

BGIOSGA024269-PA

Length

3911

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16884205..16888115

Sequence Coding Region

16884650..16888115,16884205..16884560

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16884205..16888115 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16884205..16888115 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGCGGCGATTCTTCCCGGCGTGGGTGGTGGTAGTAATGGTGGTGGTGGTGGTTCTTGGTTCTTGCTCGGCGGCGGCGGCGGCGGGGGATGGTGATGCGCTGATGGATGTGAAGAATGCGTTCGTGGAGGATCCCGGCGGCGTTCTGGCGGGATGGGGCGGCGGTGGCGGAAACTCGTCGGCGTTCTGTTCTTGGGCGGGGGTGGAGTGCGACGCGGCGGGGGCGAGGGTGACCGGGCTGAACCTGTCCGGCGCCGGGCTGGCCGGGGAGGTCCCCGGCGCGGCGCTGGCGCGGCTGGACCGGCTGGAGGTGGTCGACCTGTCGTCGAACAGGCTCGCCGGCCCGGTGCCGGCGGCGCTCGGGGCGCTCGGGAGGCTCACGGCGCTGCTGCTCTACTCCAACCGCCTCGCCGGCGAGCTCCCGCCGTCGCTGGGCGCGCTCGCCGCGCTCCGGGTGCTCCGCGTCGGCGACAACCCGGCGCTGTCGGGCCCCATCCCCGCCGCGCTCGGCGTGCTCGCCAACCTCACCGTGCTCGCCGCCGCGTCGTGCAACCTCACCGGCGCCATCCCGAGGAGCCTCGGGAGGCTCGCGGCGCTCACGGCGCTGAACCTGCAGGAGAACTCCCTGTCCGGGCCGATACCGCCGGAGCTCGGCGGCATCGCCGGGCTCGAGGTGCTCTCGCTCGCCGACAACCAGCTCACCGGCGTGATCCCGCCGGAGCTCGGGAGGCTCGCCGCGCTCCAGAAGCTGAACCTGGCGAACAACACGCTGGAGGGCGCCGTGCCGCCGGAGCTCGGGAAGCTCGGCGAGCTCGCGTACCTCAACCTCATGAACAACCGCCTCTCCGGGCGAGTCCCGCGCGAGCTCGCCGCGCTCTCCCGCGCGCGCACCATCGACCTGTCCGGCAACCTGCTCACCGGCGAACTCCCCGCCGAGGTCGGCCAGCTGCCGGAGCTCAGCTTCCTCGCGCTCTCCGGCAACCACCTTACCGGCCGCATCCCTGGCGACCTGTGCGGCGGCGGCGGCGGTGGAGCAGAGTCCACGAGCCTCGAGCACCTAATGCTCTCGACGAACAACTTCTCCGGCGAGATACCGGGGGGGCTCTCGCGGTGCCGGGCGCTGACGCAGCTCGACCTGGCGAACAACAGCCTCACCGGCGCGATCCCGGCGGCGCTCGGCGAGCTCGGCAACCTGACGGACCTGCTGCTCAACAACAACACCCTCTCCGGCGAGCTCCCGCCGGAGCTCTTCAACCTCACCGAGCTCAAGGTCCTCGCATTGTATCACAACGGGCTCACCGGCCGGCTGCCGGACGCCGTCGGCCGCCTCGTGAACCTCGAGGTGCTCTTCCTGTACGAGAACGACTTCTCCGGCGAGATACCGGAGACGATCGGGGAGTGCTCGAGCTTGCAGATGGTTGATTTCTTCGGGAACCGGTTCAACGGCAGCTTGCCGGCGTCCATCGGGAAGCTCTCCGAGCTGGCGTTCCTCCATCTCCGGCAGAACGAGCTGTCCGGCCGGATCCCGCCGGAGCTCGGCGACTGCGTGAACCTCGCCGTCCTCGACCTAGCCGACAACGCGCTCTCCGGCGAGATCCCGGCGACGTTCGGGAGGCTCCGGTCGCTGGAGCAGCTCATGCTGTACAACAACTCGCTCGCCGGCGACGTCCCCGACGGCATGTTCGAGTGCCGGAACATCACCCGCGTCAACATCGCGCACAACCGGCTCGCCGGCAGCCTCCTGCCGCTCTGCGGCTCGGCGAGGCTCCTGTCGTTCGACGCCACCAACAACTCCTTCTCCGGCGGCATCCCGGCGCAGCTCGGCCGGTCGCGGTCGCTCCAGCGCGTCCGCTTCGGGAGCAACGCGCTGTCCGGCCCGATCCCGGCGGCGCTCGGCAACGCCGCCGCGCTGACGATGCTCGACGCGTCGGGGAACGCGCTCACCGGCGGCATCCCGGACGCCCTCGCGCGGTGCGCGCGGCTCAGCCACATCGCCCTCAGCGGCAACCGGCTGTCCGGCCCCGTGCCGGCGTGGGTCGGCGCGCTGCCGGAGCTCGGTGAGCTGGCGCTCTCCGGCAACGAGCTCACCGGGCCGGTGCCCGTCCAGCTCAGCAACTGCTCCAAGCTCATCAAGCTCTCGCTCGACGGCAACCAGATCAATGGAACAGTGCCATCGGAGATCGGCAGCTTGGTCTCGCTCAACGTGCTCAACCTGGCCGGCAACCAGCTCTCCGGCGAGATTCCGGCTACCCTCGCGAAGCTGATCAACCTGTACGAGCTGAACCTGTCGCGGAATCTCTTGTCCGGCCCGATCCCTCCCGACATTGGCCAGCTGCAAGAGCTGCAGAGCTTGCTGGATTTGAGCAGCAACGATCTCAGCGGCAGCATCCCGGCGTCGCTCGGGTCGCTCTCCAAGCTGGAGAGCTTGAATCTCTCCCACAACGCGCTCGCCGGAGCTGTGCCGCCGCAGCTCGCCGGGATGAGCAGCTTGGTGCAGCTGGATTTGTCCAGCAACCAGCTGCAGGGGAGGCTGGGGAGCGAGTTCTCGCGGTGGCCGCGTGGCGCGTTCGCCGGCAACGCGCGGCTCTGCGGCCACCCGCTGGTGAGCTGCGGCGTCGGCGGCGGCGGCCGGTCGGCGCTGCGGTCGGCGACGATCGCGCTGGTGTCGGCGGCGGTGACGCTGTCGGTGGTGCTGCTGGTGATCGTGCTCGTGCTGATCGCGGTGCGGCGGCGGCGGTCCGGGGAGGTGAACTGCACGGCGTTCTCGTCGAGCCTCGGCGGTGGCGGCAACAACACGAACGGGCGGCAGCTGGTGGTGAAGGGGTCGGCGCGGCGGGAGTTCCGGTGGGAGGCGATCATGGAGGCGACGGCGAACCTGAGCGACCAGTTCGCCATCGGCTCCGGCGGGTCCGGGACGGTGTACCGGGCCGAGCTCCCCACCGGCGAGACGGTGGCCGTGAAGCGGATCGCGAACATGGACAGCGACATGCTCCTCCACGACAAGAGCTTCGCGAGGGAGGTCAAGATCCTCGGCCGCGTCCGCCACCGCCACCTCGTCAAGCTCCTCGGCTTCGTCGCCAGCCACGACGTCGGCGGCGGCGGCGGCGGCGGCAGCATGCTCGTCTACGAGTACATGGAGAACGGCAGCCTGTACGACTGGCTACACGGCATCGCCGCCGGTGGCGGCGGCGGCGGCGACGGCGAGCGCAAGAAGCGCGTGCTGAGCTGGGACGCGCGGCTGAAGGTCGCCGCCGGGCTGGCGCAGGGCGTCGAGTACCTCCACCACGACTGCGTCCCCCGCGTCGTCCACCGCGACATCAAGTCCAGCAACGTCCTCCTCGACGGCGACATGGAGGCGCACCTCGGCGACTTCGGCCTCGCCAAGTCCGTCGCCGACAACCGCAAGGACTTCACCGACTCCGCCTCCTGCTTCGCCGGCTCCTACGGCTACATGGCCCCAGAGTGCGGATACAGCTTGAAGACGACGGAGAAGAGCGACGTGTACAGCATGGGGATCGTGATGATGGAGCTGGTGACCGGGCTGACGCCGACGGACAAGGCGTTCGGCGGCGACGTGGACATGGTGCGGTGGGTGCAGTCGAGGGTGGAGGCGCCGTCGCCGGGGCGGGAGCAGGTGTTCGACCCGGCGCTGAAGCCGCTGGCGCCGCGGGAGGAGTCGTCGATGACGGAGGTGCTGGAGGTGGCGCTCCGGTGCACGAGGACGGCGCCGGGGGAGAGGCCCACGGCGAGGCAGGTGTCCGACCTGCTGCTCCACGTCTCGCTCGATTACTATCGAGCCGGCGAGCACAAGCGCTAG</cdnaseq>

Protein Sequence

<aaseq>MARRRFFPAWVVVVMVVVVVLGSCSAAAAAGDGDALMDVKNAFVEDPGGVLAGWGGGGGNSSAFCSWAGVECDAAGARVTGLNLSGAGLAGEVPGAALARLDRLEVVDLSSNRLAGPVPAALGALGRLTALLLYSNRLAGELPPSLGALAALRVLRVGDNPALSGPIPAALGVLANLTVLAAASCNLTGAIPRSLGRLAALTALNLQENSLSGPIPPELGGIAGLEVLSLADNQLTGVIPPELGRLAALQKLNLANNTLEGAVPPELGKLGELAYLNLMNNRLSGRVPRELAALSRARTIDLSGNLLTGELPAEVGQLPELSFLALSGNHLTGRIPGDLCGGGGGGAESTSLEHLMLSTNNFSGEIPGGLSRCRALTQLDLANNSLTGAIPAALGELGNLTDLLLNNNTLSGELPPELFNLTELKVLALYHNGLTGRLPDAVGRLVNLEVLFLYENDFSGEIPETIGECSSLQMVDFFGNRFNGSLPASIGKLSELAFLHLRQNELSGRIPPELGDCVNLAVLDLADNALSGEIPATFGRLRSLEQLMLYNNSLAGDVPDGMFECRNITRVNIAHNRLAGSLLPLCGSARLLSFDATNNSFSGGIPAQLGRSRSLQRVRFGSNALSGPIPAALGNAAALTMLDASGNALTGGIPDALARCARLSHIALSGNRLSGPVPAWVGALPELGELALSGNELTGPVPVQLSNCSKLIKLSLDGNQINGTVPSEIGSLVSLNVLNLAGNQLSGEIPATLAKLINLYELNLSRNLLSGPIPPDIGQLQELQSLLDLSSNDLSGSIPASLGSLSKLESLNLSHNALAGAVPPQLAGMSSLVQLDLSSNQLQGRLGSEFSRWPRGAFAGNARLCGHPLVSCGVGGGGRSALRSATIALVSAAVTLSVVLLVIVLVLIAVRRRRSGEVNCTAFSSSLGGGGNNTNGRQLVVKGSARREFRWEAIMEATANLSDQFAIGSGGSGTVYRAELPTGETVAVKRIANMDSDMLLHDKSFAREVKILGRVRHRHLVKLLGFVASHDVGGGGGGGSMLVYEYMENGSLYDWLHGIAAGGGGGGDGERKKRVLSWDARLKVAAGLAQGVEYLHHDCVPRVVHRDIKSSNVLLDGDMEAHLGDFGLAKSVADNRKDFTDSASCFAGSYGYMAPECGYSLKTTEKSDVYSMGIVMMELVTGLTPTDKAFGGDVDMVRWVQSRVEAPSPGREQVFDPALKPLAPREESSMTEVLEVALRCTRTAPGERPTARQVSDLLLHVSLDYYRAGEHKR</aaseq>

Gene Sequence

<dnaseqindica>1..3466#3556..3911#ATGGCGCGGCGGCGATTCTTCCCGGCGTGGGTGGTGGTAGTAATGGTGGTGGTGGTGGTTCTTGGTTCTTGCTCGGCGGCGGCGGCGGCGGGGGATGGTGATGCGCTGATGGATGTGAAGAATGCGTTCGTGGAGGATCCCGGCGGCGTTCTGGCGGGATGGGGCGGCGGTGGCGGAAACTCGTCGGCGTTCTGTTCTTGGGCGGGGGTGGAGTGCGACGCGGCGGGGGCGAGGGTGACCGGGCTGAACCTGTCCGGCGCCGGGCTGGCCGGGGAGGTCCCCGGCGCGGCGCTGGCGCGGCTGGACCGGCTGGAGGTGGTCGACCTGTCGTCGAACAGGCTCGCCGGCCCGGTGCCGGCGGCGCTCGGGGCGCTCGGGAGGCTCACGGCGCTGCTGCTCTACTCCAACCGCCTCGCCGGCGAGCTCCCGCCGTCGCTGGGCGCGCTCGCCGCGCTCCGGGTGCTCCGCGTCGGCGACAACCCGGCGCTGTCGGGCCCCATCCCCGCCGCGCTCGGCGTGCTCGCCAACCTCACCGTGCTCGCCGCCGCGTCGTGCAACCTCACCGGCGCCATCCCGAGGAGCCTCGGGAGGCTCGCGGCGCTCACGGCGCTGAACCTGCAGGAGAACTCCCTGTCCGGGCCGATACCGCCGGAGCTCGGCGGCATCGCCGGGCTCGAGGTGCTCTCGCTCGCCGACAACCAGCTCACCGGCGTGATCCCGCCGGAGCTCGGGAGGCTCGCCGCGCTCCAGAAGCTGAACCTGGCGAACAACACGCTGGAGGGCGCCGTGCCGCCGGAGCTCGGGAAGCTCGGCGAGCTCGCGTACCTCAACCTCATGAACAACCGCCTCTCCGGGCGAGTCCCGCGCGAGCTCGCCGCGCTCTCCCGCGCGCGCACCATCGACCTGTCCGGCAACCTGCTCACCGGCGAACTCCCCGCCGAGGTCGGCCAGCTGCCGGAGCTCAGCTTCCTCGCGCTCTCCGGCAACCACCTTACCGGCCGCATCCCTGGCGACCTGTGCGGCGGCGGCGGCGGTGGAGCAGAGTCCACGAGCCTCGAGCACCTAATGCTCTCGACGAACAACTTCTCCGGCGAGATACCGGGGGGGCTCTCGCGGTGCCGGGCGCTGACGCAGCTCGACCTGGCGAACAACAGCCTCACCGGCGCGATCCCGGCGGCGCTCGGCGAGCTCGGCAACCTGACGGACCTGCTGCTCAACAACAACACCCTCTCCGGCGAGCTCCCGCCGGAGCTCTTCAACCTCACCGAGCTCAAGGTCCTCGCATTGTATCACAACGGGCTCACCGGCCGGCTGCCGGACGCCGTCGGCCGCCTCGTGAACCTCGAGGTGCTCTTCCTGTACGAGAACGACTTCTCCGGCGAGATACCGGAGACGATCGGGGAGTGCTCGAGCTTGCAGATGGTTGATTTCTTCGGGAACCGGTTCAACGGCAGCTTGCCGGCGTCCATCGGGAAGCTCTCCGAGCTGGCGTTCCTCCATCTCCGGCAGAACGAGCTGTCCGGCCGGATCCCGCCGGAGCTCGGCGACTGCGTGAACCTCGCCGTCCTCGACCTAGCCGACAACGCGCTCTCCGGCGAGATCCCGGCGACGTTCGGGAGGCTCCGGTCGCTGGAGCAGCTCATGCTGTACAACAACTCGCTCGCCGGCGACGTCCCCGACGGCATGTTCGAGTGCCGGAACATCACCCGCGTCAACATCGCGCACAACCGGCTCGCCGGCAGCCTCCTGCCGCTCTGCGGCTCGGCGAGGCTCCTGTCGTTCGACGCCACCAACAACTCCTTCTCCGGCGGCATCCCGGCGCAGCTCGGCCGGTCGCGGTCGCTCCAGCGCGTCCGCTTCGGGAGCAACGCGCTGTCCGGCCCGATCCCGGCGGCGCTCGGCAACGCCGCCGCGCTGACGATGCTCGACGCGTCGGGGAACGCGCTCACCGGCGGCATCCCGGACGCCCTCGCGCGGTGCGCGCGGCTCAGCCACATCGCCCTCAGCGGCAACCGGCTGTCCGGCCCCGTGCCGGCGTGGGTCGGCGCGCTGCCGGAGCTCGGTGAGCTGGCGCTCTCCGGCAACGAGCTCACCGGGCCGGTGCCCGTCCAGCTCAGCAACTGCTCCAAGCTCATCAAGCTCTCGCTCGACGGCAACCAGATCAATGGAACAGTGCCATCGGAGATCGGCAGCTTGGTCTCGCTCAACGTGCTCAACCTGGCCGGCAACCAGCTCTCCGGCGAGATTCCGGCTACCCTCGCGAAGCTGATCAACCTGTACGAGCTGAACCTGTCGCGGAATCTCTTGTCCGGCCCGATCCCTCCCGACATTGGCCAGCTGCAAGAGCTGCAGAGCTTGCTGGATTTGAGCAGCAACGATCTCAGCGGCAGCATCCCGGCGTCGCTCGGGTCGCTCTCCAAGCTGGAGAGCTTGAATCTCTCCCACAACGCGCTCGCCGGAGCTGTGCCGCCGCAGCTCGCCGGGATGAGCAGCTTGGTGCAGCTGGATTTGTCCAGCAACCAGCTGCAGGGGAGGCTGGGGAGCGAGTTCTCGCGGTGGCCGCGTGGCGCGTTCGCCGGCAACGCGCGGCTCTGCGGCCACCCGCTGGTGAGCTGCGGCGTCGGCGGCGGCGGCCGGTCGGCGCTGCGGTCGGCGACGATCGCGCTGGTGTCGGCGGCGGTGACGCTGTCGGTGGTGCTGCTGGTGATCGTGCTCGTGCTGATCGCGGTGCGGCGGCGGCGGTCCGGGGAGGTGAACTGCACGGCGTTCTCGTCGAGCCTCGGCGGTGGCGGCAACAACACGAACGGGCGGCAGCTGGTGGTGAAGGGGTCGGCGCGGCGGGAGTTCCGGTGGGAGGCGATCATGGAGGCGACGGCGAACCTGAGCGACCAGTTCGCCATCGGCTCCGGCGGGTCCGGGACGGTGTACCGGGCCGAGCTCCCCACCGGCGAGACGGTGGCCGTGAAGCGGATCGCGAACATGGACAGCGACATGCTCCTCCACGACAAGAGCTTCGCGAGGGAGGTCAAGATCCTCGGCCGCGTCCGCCACCGCCACCTCGTCAAGCTCCTCGGCTTCGTCGCCAGCCACGACGTCGGCGGCGGCGGCGGCGGCGGCAGCATGCTCGTCTACGAGTACATGGAGAACGGCAGCCTGTACGACTGGCTACACGGCATCGCCGCCGGTGGCGGCGGCGGCGGCGACGGCGAGCGCAAGAAGCGCGTGCTGAGCTGGGACGCGCGGCTGAAGGTCGCCGCCGGGCTGGCGCAGGGCGTCGAGTACCTCCACCACGACTGCGTCCCCCGCGTCGTCCACCGCGACATCAAGTCCAGCAACGTCCTCCTCGACGGCGACATGGAGGCGCACCTCGGCGACTTCGGCCTCGCCAAGTCCGTCGCCGACAACCGCAAGGACTTCACCGACTCCGCCTCCTGCTTCGCCGGCTCCTACGGCTACATGGCCCCAGGTAAAAACCAAACTTCCGTTGTGTCAATTGCTCGCCACCATGTCCATGTCGCGGACGCCATTGATGGGCATCTTGGATCTTGCGCGCAGAGTGCGGATACAGCTTGAAGACGACGGAGAAGAGCGACGTGTACAGCATGGGGATCGTGATGATGGAGCTGGTGACCGGGCTGACGCCGACGGACAAGGCGTTCGGCGGCGACGTGGACATGGTGCGGTGGGTGCAGTCGAGGGTGGAGGCGCCGTCGCCGGGGCGGGAGCAGGTGTTCGACCCGGCGCTGAAGCCGCTGGCGCCGCGGGAGGAGTCGTCGATGACGGAGGTGCTGGAGGTGGCGCTCCGGTGCACGAGGACGGCGCCGGGGGAGAGGCCCACGGCGAGGCAGGTGTCCGACCTGCTGCTCCACGTCTCGCTCGATTACTATCGAGCCGGCGAGCACAAGCGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024269