Os06g0134500

From RiceWiki
Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0134500| Description = Conserved hypothetical protein| Version = NM_001063251.1 GI:115466233 GeneID:4340031| Length = 3531 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0134500

Description

Conserved hypothetical protein

Version

NM_001063251.1 GI:115466233 GeneID:4340031

Length

3531 bp

Definition

Oryza sativa Japonica Group Os06g0134500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1856524..1860054

Sequence Coding Region

1856626..1856667,1856765..1856806,1856917..1857044,1857320..1857527,1857626..1857806
,1858574..1858927,1859714..1859853

Expression

GEO Profiles:Os06g0134500

Genome Context

<gbrowseImage1> name=NC_008399:1856524..1860054 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1856524..1860054 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagatcacggcggctcccctgtgcggatgcggtgttccgaccccgcttcaccgatgaggacgcacgagcgtgcagcgattctcgtgggcatttcgcctcaggacgcgatccatccccgccgccgctgctgccggcacagtgtgaggatcatgtgggaggtacctctggtcttgcagatgtttcatccttaggggactttcctggtgctacaacattgaaagaatcaaccgcttccagtcccacttcctccctacaggcagtaccagatgacaccattgatgctccgcagtcagggcactgcctttcctcatcccttggctcaatcatttgggttcagaaacctcctcatggccgacctggcgtataccacattagaaaggatcgtttggggtctttccatacgtatcctgatctgggtggtccatttcagagcttgaatgaagctgaagatgttatcagtagccatattaacaagctgtatccaccagttaagttcgaggaacgagctggggaatcttacgtggacatgattataaggaaagcactttattggcctgatggcactaggaagaaatgttccaaagcagaagcatttcagaatgtcaataataatatgaatcaactggctaaggtgatattagacatgtataacgatgaccacaatcttttggaggatcttgcttttgagctcaaaggtgtcattaactatgaaccaattattgaaagtcgtaggtggtttgatcatattaatttcactgcgactactaaaggactaaatgggttggacagtgaccatctatttttcgctgaagcgatgtctttgaaaggagaaaaagattatgtggtcacttgctgctctttgataagttctgatgacaatggtaactgctatacctgcaagattgggaataaaagtatgaagcacccaagtgatgtcaattcatatgttggtggtcactgttatatcaaaggaatatatgacactatagtgtcgagtgactctgaagaggatgaggatgcagaggagcagaggctaagaaaaatgtatcagggtcttgatgatccaggtgtatgtgaagagctctttgattga</cdnaseq>

Protein Sequence

<aaseq>MRSRRLPCADAVFRPRFTDEDARACSDSRGHFASGRDPSPPPLL PAQCEDHVGGTSGLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCL SSSLGSIIWVQKPPHGRPGVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKL YPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYN DDHNLLEDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLK GEKDYVVTCCSLISSDDNGNCYTCKIGNKSMKHPSDVNSYVGGHCYIKGIYDTIVSSD SEEDEDAEEQRLRKMYQGLDDPGVCEELFD</aaseq>

Gene Sequence

<dnaseqindica>3388..3429#3249..3290#3011..3138#2528..2735#2249..2429#1128..1481#202..341#aaaggaaagtgggcccaattctgctaggcccaatagccatccttcctcacctcgctcacccgcgttcgccggcgaccacgacgaaccaagccctagtccccgccacgccaccgtccgccggccgccggcgacgcccccaccgccggaggaggccaaccccatccatccatcgcccctccaccgacgcgcggccgcacgtccatgagatcacggcggctcccctgtgcggatgcggtgttccgaccccgcttcaccgatgaggacgcacgagcgtgcagcgattctcgtgggcatttcgcctcaggacgcgatccatccccgccgccgctgctgccggcacagtacgaccaccacctctccccttccacctccctcgatcctttctctgtttctaattggtatcttagagagagttttgttttgatagatagaatacctgaaggaactaggaatctaggattggttaatttcgattaaatcgaattattttaattacttgtggtcatggctattccctaataaggaggagacgagttgcgactgttgatctttgaggagaggaagaaggcttgaggacctccatttgatagaaaatcgaagccccgatcttacagatttttgaccttctggtctgctccgagattcatgcaacatgatcacctcctgctctggtgagctcgttgatctccggcgacgatggtggtgggcagagggggaacaggggggaggttcctgagtttagaggtaggccggagtggacaaggcatctactggtcgagtggttaggttgtgggggcacctcgccgttgtgctttccagcggcggcgtgctgggccggtggcagaggaggaggcaggcgatccgcagaatggcggcaggactgagggagggaggaacaaggggttagggctggttgcatgaatctcaaaacgatccaacgtgtccacaattcacaagatttttggggttgtcttctgtcaagtgtcaaataggttatctcataaaaatatgcatttccatgaatcatagttatatatatatttctgggtctattaacctgcattgtacaacgaagtattgatttcataagatgaattgtttgtactcactgatcttgttcactgcaggtgtgaggatcatgtgggaggtacctctggtcttgcagatgtttcatccttaggggactttcctggtgctacaacattgaaagaatcaaccgcttccagtcccacttcctccctacaggcagtaccagatgacaccattgatgctccgcagtcagggcactgcctttcctcatcccttggctcaatcatttgggttcagaaacctcctcatggccgacctggcgtataccacattagaaaggatcgtttggggtctttccatacgtatcctgatctgggtggtccatttcagagcttgaatgaagctgaagatgttatcagtagccatattaacaagctgtatccaccagttaagtaaggttcctacactctgttgtagcttgcaactactccatttatttcccatgtgtttggtatgatattcagggcatgagtcatgaacagaattgtgggctgtaacttgtaatttaaagtagctgatagtgacgagatcagttgagcaaacgagcagttttaggtaactttgtatatatgggggcatggagttgttaagcacaaaatgactgcaaaccataagataacacgaagttcacaaataagctacatttcactagtttttacctaggaattttcaatttcatttgcagcgtttacaattatattgctgctcagctagctttaatgtgtcagaggtaaacacgagtgatcacacagaacttagtctaatcgcaggtaaaaataggacggaaaaaccaggatgagtttaggatctaaaccttgaaactatgatactttctatagattgataaactacaagacgatagccatgcccttatatatctagaaacaagcaaattcagttacgcatgccttttgaattatgcattttcgtgcttctttgataactgcaaaaaaccatactactgttttagtttgaactaatatgagtgctaaatttcaatttgacaacatttactcaaacttttcttatcctgaaactcttaacttattggaatgtaatctctataacaaacttcttaccagtgcctttgcaacccctgcattgtactatctacattctgccttatactaatggtatggactgatctgatttgagttaggttcgaggaacgagctggggaatcttacgtggacatgattataaggaaagcactttattggcctgatggcactaggaagaaatgttccaaagcagaagcatttcagaatgtcaataataatatgaatcaactggctaaggtgatattagacatgtataacgatgaccacaatcttttggaggtttgttatcgccctcgttgtctgtctcattctttctgcactgtgatgatgtctaattgattccacactttctgatcttattgtatttcttattgcaggatcttgcttttgagctcaaaggtgtcattaactatgaaccaattattgaaagtcgtaggtggtttgatcatattaatttcactgcgactactaaaggactaaatgggttggacagtgaccatctatttttcgctgaagcgatgtctttgaaaggagaaaaagattatgtggtcacttgctgctctttgataagttctgatgacaatggtaagctatacccatcttaacttttatagacttggattcatacttcataatttgtatatactcatgcacctgggagacttcataatttgtatatactcatgcacctgggagaagcatcggttttgcatgtctagttaatctgtttttcatcggttcttgcattttttttcctttttaccttcattagctcaactagaatttatgatatttacatataattggtgcttaactgattgtgtgtctgtcatttcacgaacaacctatttctttctcaggtaactgctatacctgcaagattgggaataaaagtatgaagcacccaagtgatgtcaattcatatgttggtggtcactgttatatcaaaggaatatatgacactatagtgtcgagtgactctgaagaggtctgatgatctatcttttcccccatttagtttttgtaagacattcatgcatatattaagattcattattacaatgttagtgacacatttttctgcccttggattgacaggatgaggatgcagaggagcagaggctaagaaaaatgtatcaggtatgtgacatgcttcagaccgaacgttattatgcatgcagtatggtgtcttttttttttctctctcaattggtaattgctctcgtgtttttcttagggtcttgatgatccaggtgtatgtgaagagctctttgattgagatcatgtcagttgcaactgtaacggatttataattagcatatgtcatgcaaccatgttgtggagctgtagttttatttagttatctttgatcttgattatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0134500, RefSeq:Os06g0134500