Os06g0136000

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0136000| Description = Similar to Hypersensitive-induced reaction protein 4| Version = NM_001063258.1 GI:115466247 GeneID:4340038| Length =...")
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Gene Name

Os06g0136000

Description

Similar to Hypersensitive-induced reaction protein 4

Version

NM_001063258.1 GI:115466247 GeneID:4340038

Length

3331 bp

Definition

Oryza sativa Japonica Group Os06g0136000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1908701..1912031

Sequence Coding Region

1908931..1909292,1909837..1909933,1910704..1910795,1910882..1911002,1911681..1911875

Expression

GEO Profiles:Os06g0136000

Genome Context

<gbrowseImage1> name=NC_008399:1908701..1912031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1908701..1912031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagcgccttcttcctgctgtgcgggtgcgtggaccaggcgagcgtcgcggtggtggagaagtggggccgcttcctccgcctcgccgagccgggcctccacttcttcaacccgttcgccggcgagttcgtcgccgggacgctctccacccgcgtccagtcgctcgacgtccgcgtcgagaccaagaccaaggataatgtctttgttcagcttatctgcacaatccaatatcgggttgttaaggaacatgctgatgatgcattctatgagttgcagaatccccaacagcaaattcaggcctacgtctttgatgtggtccgagctatagttccgagaatgaatcttgatgatctttttgagcaaaagaatgatgtggcgaaagctgtacttcaggagctagaaaaggtgatgggagattatggttacagcattgagcacattctcatggttgacatcatccctgatgctgctgtacgcagagcaatgaatgaaataaatgcagcacaaaggcttcagcttgcaagtgtctacaaaggagaggcggagaagattcttctggtgaagaaagcagaagcagaggcagaggcaaaacacctttccggtgtcggcattgctagacagcggcaggcgataactgatggcctgagagagaacatcctgaacttctcgcactcggtttcaggcacctcagcaaaagaagtcatggatctcatcatggtcacgcagtacttcgacaccatcaaagaacttggggatggctcgaagaacaccacggtgttcatacctcatggcccaggccatgtcagggatatcagcgagcaaatccggaatggtatgatggaagcgtcctgcagcaacgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MVSAFFLLCGCVDQASVAVVEKWGRFLRLAEPGLHFFNPFAGEF VAGTLSTRVQSLDVRVETKTKDNVFVQLICTIQYRVVKEHADDAFYELQNPQQQIQAY VFDVVRAIVPRMNLDDLFEQKNDVAKAVLQELEKVMGDYGYSIEHILMVDIIPDAAVR RAMNEINAAQRLQLASVYKGEAEKILLVKKAEAEAEAKHLSGVGIARQRQAITDGLRE NILNFSHSVSGTSAKEVMDLIMVTQYFDTIKELGDGSKNTTVFIPHGPGHVRDISEQI RNGMMEASCSNV</aaseq>

Gene Sequence

<dnaseqindica>2740..3101#2099..2195#1237..1328#1030..1150#157..351#atcatcgtgttcgtttcctcgtcaaaagggcaaaaagaacacgaagaagaggggcgtccaaatccgccgccgaattccccacccgtcgcgtccaaaatccaaatccgccgccgcgatcgaggccgacgaggagaggttgaggttgaggtgagagccatggtgagcgccttcttcctgctgtgcgggtgcgtggaccaggcgagcgtcgcggtggtggagaagtggggccgcttcctccgcctcgccgagccgggcctccacttcttcaacccgttcgccggcgagttcgtcgccgggacgctctccacccgcgtccagtcgctcgacgtccgcgtcgagaccaagaccaaggtttcccttctcggtcacgctacctcgcgagtttcttctgtttgttttggatttctagtgtagcccccatggccattatccaatgttaaggttcaatactaggcagaccatggaattattcgtaattctccacctgagcccactgattggggatttggttcaaagtatgtattcgatcagttctctcggtgcgccagattagtatctaattgttgaaccagacagggtccattttgtcctaattactgatgggagtaacagagctggtatgcttgtgatgggtgtgcgtgatggtggaaaaaaagtaattagtcaatgctaattgggcatatttcattgtgtctgctgggtgatgcttaacgatgtcatgctaagtgaaccaagggaattactgttactctgtaaatttagttggttcatgagatgaagttgtcgagcaacattatttgaggatcagtgatatgcagatttttcctttttccttttattgggagatgctttgccaggacagcaatggaaacgcaattaataacatgttatatccttgtgatgctcttgctatatagcgcttacaaatgaaatgaaatatttgctatggaatgacaattttacttaatgctagcacttggttgtttctttgcttgatgaaacattggatgatgtgcttttcccctgcaggataatgtctttgttcagcttatctgcacaatccaatatcgggttgttaaggaacatgctgatgatgcattctatgagttgcagaatccccaacagcaaattcaggcctacgtctttgatggtaaaattattaatattgaacaattcagctgttgctcatagcaaattactgactcaaaaatctaaccactttttccttgaaatcagtggtccgagctatagttccgagaatgaatcttgatgatctttttgagcaaaagaatgatgtggcgaaagctgtacttcaggagctagaaaaggtaaccgtatgccaattaacttgatcttttagttgtgaaaattccagtatacatctaatcaatattttaggtttctacatgtattgcttgcttctattgtttcatggtaaacacttcatgtgtttaaacaattctgccaggattctaactgccgtcacccatctgttttgtggttgttgcagtattctttttgttatttttcccctttgattccttttgcatgtttcgagagttgggaattttctttggttcattctaaacatgccgtttggtttctgtcagttcatttttttttaaaaaaagtattggttttaagttttaacatacttatttattgggacaagggatagttccaggatactacttggtggaacgttgttgtttgtacaacttgcatcacaaagaactttgatattgtgttgtatgctgcaatgagttctgctcaggaaactaaagtgtttactaacttttggacacccgtgtttctttcttccacaggtgattggtaataaatatgataaaaataaaattgtttctggttatccaatgctatcattgtttatccaagtttcattgctaaagtctagttttgtcatgaaaattctgttgcctcttattgtcagtgataagcaatttcttgtatactatatagtttctcttccccccaaaagaatcacaatgtccatggtctgttcatctttttcttcgatggtcttctcgtactgtagtttctgtcgtcttgcaatttgataaatcctagatgcttccaggtgatgggagattatggttacagcattgagcacattctcatggttgacatcatccctgatgctgctgtacgcagagcaatgaatgaaataaatgcaggtatggtgccctatatgtcgtacttctttcatagtgtacagtccggaggaccttttctcggtttattggatgccgcaatgttttctcgaagtcaaaacctatcacagttcttatagttatctaatgcttttatgttatcttttctactcatgcttcattttctgtttcttgtaatgttggaagaaagttgaatgacgatgacttgagttaaaacagtgaaagcagggaataggttggggaagaaacatatgtaaaatatatgatcagggaaagaccattgcaatattgaaaggaataggattagtttattcatgcttgcttaattcaacctacgaatgagtctaccctctattttaggtcttgcaacctatctatctcaatctgaacttaaattatgccaactgtcttgtactgactctgtcctggttcattgctcatagttacatattgtacaaaccacaccacaattatagcaacgtctgatgttaagacaatttctgttttgtgcatgtgtgctcactcaactattaaattcttataacagcacaaaggcttcagcttgcaagtgtctacaaaggagaggcggagaagattcttctggtgaagaaagcagaagcagaggcagaggcaaaacacctttccggtgtcggcattgctagacagcggcaggcgataactgatggcctgagagagaacatcctgaacttctcgcactcggtttcaggcacctcagcaaaagaagtcatggatctcatcatggtcacgcagtacttcgacaccatcaaagaacttggggatggctcgaagaacaccacggtgttcatacctcatggcccaggccatgtcagggatatcagcgagcaaatccggaatggtatgatggaagcgtcctgcagcaacgtgtaaatcggtatcgaatgcggaaccaaggttgggggtggttcagatgggaggtcctgtttatagtgaatagtacgaatgaatgctagtagcatgtgttgtttgcacgcgcgccctggagttgtatgcagtggtagatagagttcgagttttggcataataatattgtctgaattttatgtaaaagaaaatcacatgtcttccttttgtgagttaaaagttgcaccgatttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0136000, RefSeq:Os06g0136000