BGIOSGA024476

From RiceWiki
Revision as of 16:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024476

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024476, complete gene.

LocusTag

OSJNBA0028O21.4

Ensembl Transcript ID

BGIOSGA024476-TA

Ensembl Protein ID

BGIOSGA024476-PA

Length

1869

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:10549500..10551368

Sequence Coding Region

10549500..10551368

Genome Context

<gbrowseImage1> name=IndicaChromosome07:10549500..10551368 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:10549500..10551368 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCACACCAGACGGCATCCTTGAGCTCACCAATGACACAATTAATCTAGGACACGCATTTTATCCAACTCCACAAAACTTCCGCAAATTTTCCAACAGCACAGTGCAATCATTCTCACTCAGCTTTGTGTTTGCAATCCTCTCAGTGCATGATGATATAAGTGCAGATGGCATGGCCTTCTTTGTTGCTCCAAGCAAGAACCTTTCCAATACATGGGCACAGTATATAGGTCTCCTCAATAGTAGGAACGATGGCAACAGAAGCAATCACATGTTCGCGGTCGAGCTTGATACTACCCAAAATGATGAGTTCAAAGACATCGACAACAACCACGTTGGAATCAACATCAACAGCCTCATCTCTTTGCAAGCTCACCACACTGGATACTACGATGACAAGAGTGGTTTCTTCAACAACTTGACTCTGATCAGTGGCAAGGCCATGCAGGTATGGGCTGACTATGATGGAGAGTCTGCACAAATCAACGTTACCTTGGCTCATCTTGGAGCACCCAAATCTGTAAGACCACTGCTTTCATCTTCCTATAACCTCTCAGATGTTCTTAGAGATCAATCATACATCGGTTTCTCAGCCACAACAGGTGCGATTAGCACAAGACATTGCGTACTTGGCTGGAGTTTTGCTATGAATAGTCCTGCTCCAGCTATAGACATCTCCAGACTCCCAAAGCTACCACGCCTTGGCCCAAAGCCTCGTTCCAAGACCTTAGATATCACCCTGCCTATAGCCACAGCAATATTTGTCCTTGCTGCTGGTACCGTTGTTGTTTTACTTGTTCGTAGAAGATTGAGATATATGGAGCTACGGGAAGATTGGGAGGTTGATTTTGGGCCACATCGATTCTCCTTCAAAGACATGTACCATGCTACGGAAGGGTTTAATAAAAATAACTTACTAGGAGTAGGTGGGTTTGGCAAAGTTTATAAAGGCGTTCTTCAGAAGTCTAAAGTTCCAGTAGCTATTAAGAGGGTGTCCCACGAGTCTACACAAGGGATGAAAGAGTTCATTGCTGAGGTTGTCAGTATTGGTAAGCTCAGACACCGCAACCTAGTGCCTCTACTTGGTTATTGTCGGCGAAAAGGTCAACTCCTTCTAGTATATGACTATATGTCAAATGGCAGCCTTAATAAGTATTTGTATCCTGAAGATGGAAAACCATTATTGAATTGGGCCGAGAGGTTTCATGTCATCAAGGGTGTCGCATTTGGCTTGCTCTATCTCCATGAGAAGTGGGAAAAGGTTGTCATACACCGAGATATTAAACCAAGTAATGTTCTTCTAGATAGTGAAATGAATGGAAAATTAGGTGACTTTGGTCTTTCAAGGTTATATGACCATGGGACTGATCCACAAACCACTCACATGGTTGGAACCATGGGGTACTTAGCTCCAGAATTGGTACGCACAGGGAGAGCATCCACTTCTACAGATGTCTTTGCATTTGGCATATTTCTTCTTGAGGTCACCTGTGGGCAAAGACCTATTAAGAAAGACTCACAGGGAAACCAGCATAGTTTGTTCGATTGGGTTCTTCAGTTTCTGCATAATAGCTCACTAATCGAGGCCATGGACAGTAGACTCCAAGCTGATTTTAATATCGATGAGGTTTGTCTTGTCCTAAAGCTAGGTCTTCTATGCTCACACCCATTTACTAATGCAAGACCTAGCATGCAGCAAGTCATGGAGTACCTTGAAGGTGATACACCAATACCAGAGATTTCATCAAGGCATTTTAGCTTTACTATGCAGGCTTTGATGCAGAGCAAAGGATTTGAATCACCAGACATGTTATGCCCACAGTTTACGAGTATTGGCACATTCTCTGAACTGTCAGGGGGAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MVTPDGILELTNDTINLGHAFYPTPQNFRKFSNSTVQSFSLSFVFAILSVHDDISADGMAFFVAPSKNLSNTWAQYIGLLNSRNDGNRSNHMFAVELDTTQNDEFKDIDNNHVGININSLISLQAHHTGYYDDKSGFFNNLTLISGKAMQVWADYDGESAQINVTLAHLGAPKSVRPLLSSSYNLSDVLRDQSYIGFSATTGAISTRHCVLGWSFAMNSPAPAIDISRLPKLPRLGPKPRSKTLDITLPIATAIFVLAAGTVVVLLVRRRLRYMELREDWEVDFGPHRFSFKDMYHATEGFNKNNLLGVGGFGKVYKGVLQKSKVPVAIKRVSHESTQGMKEFIAEVVSIGKLRHRNLVPLLGYCRRKGQLLLVYDYMSNGSLNKYLYPEDGKPLLNWAERFHVIKGVAFGLLYLHEKWEKVVIHRDIKPSNVLLDSEMNGKLGDFGLSRLYDHGTDPQTTHMVGTMGYLAPELVRTGRASTSTDVFAFGIFLLEVTCGQRPIKKDSQGNQHSLFDWVLQFLHNSSLIEAMDSRLQADFNIDEVCLVLKLGLLCSHPFTNARPSMQQVMEYLEGDTPIPEISSRHFSFTMQALMQSKGFESPDMLCPQFTSIGTFSELSGGR</aaseq>

Gene Sequence

<dnaseqindica>1..1869#ATGGTCACACCAGACGGCATCCTTGAGCTCACCAATGACACAATTAATCTAGGACACGCATTTTATCCAACTCCACAAAACTTCCGCAAATTTTCCAACAGCACAGTGCAATCATTCTCACTCAGCTTTGTGTTTGCAATCCTCTCAGTGCATGATGATATAAGTGCAGATGGCATGGCCTTCTTTGTTGCTCCAAGCAAGAACCTTTCCAATACATGGGCACAGTATATAGGTCTCCTCAATAGTAGGAACGATGGCAACAGAAGCAATCACATGTTCGCGGTCGAGCTTGATACTACCCAAAATGATGAGTTCAAAGACATCGACAACAACCACGTTGGAATCAACATCAACAGCCTCATCTCTTTGCAAGCTCACCACACTGGATACTACGATGACAAGAGTGGTTTCTTCAACAACTTGACTCTGATCAGTGGCAAGGCCATGCAGGTATGGGCTGACTATGATGGAGAGTCTGCACAAATCAACGTTACCTTGGCTCATCTTGGAGCACCCAAATCTGTAAGACCACTGCTTTCATCTTCCTATAACCTCTCAGATGTTCTTAGAGATCAATCATACATCGGTTTCTCAGCCACAACAGGTGCGATTAGCACAAGACATTGCGTACTTGGCTGGAGTTTTGCTATGAATAGTCCTGCTCCAGCTATAGACATCTCCAGACTCCCAAAGCTACCACGCCTTGGCCCAAAGCCTCGTTCCAAGACCTTAGATATCACCCTGCCTATAGCCACAGCAATATTTGTCCTTGCTGCTGGTACCGTTGTTGTTTTACTTGTTCGTAGAAGATTGAGATATATGGAGCTACGGGAAGATTGGGAGGTTGATTTTGGGCCACATCGATTCTCCTTCAAAGACATGTACCATGCTACGGAAGGGTTTAATAAAAATAACTTACTAGGAGTAGGTGGGTTTGGCAAAGTTTATAAAGGCGTTCTTCAGAAGTCTAAAGTTCCAGTAGCTATTAAGAGGGTGTCCCACGAGTCTACACAAGGGATGAAAGAGTTCATTGCTGAGGTTGTCAGTATTGGTAAGCTCAGACACCGCAACCTAGTGCCTCTACTTGGTTATTGTCGGCGAAAAGGTCAACTCCTTCTAGTATATGACTATATGTCAAATGGCAGCCTTAATAAGTATTTGTATCCTGAAGATGGAAAACCATTATTGAATTGGGCCGAGAGGTTTCATGTCATCAAGGGTGTCGCATTTGGCTTGCTCTATCTCCATGAGAAGTGGGAAAAGGTTGTCATACACCGAGATATTAAACCAAGTAATGTTCTTCTAGATAGTGAAATGAATGGAAAATTAGGTGACTTTGGTCTTTCAAGGTTATATGACCATGGGACTGATCCACAAACCACTCACATGGTTGGAACCATGGGGTACTTAGCTCCAGAATTGGTACGCACAGGGAGAGCATCCACTTCTACAGATGTCTTTGCATTTGGCATATTTCTTCTTGAGGTCACCTGTGGGCAAAGACCTATTAAGAAAGACTCACAGGGAAACCAGCATAGTTTGTTCGATTGGGTTCTTCAGTTTCTGCATAATAGCTCACTAATCGAGGCCATGGACAGTAGACTCCAAGCTGATTTTAATATCGATGAGGTTTGTCTTGTCCTAAAGCTAGGTCTTCTATGCTCACACCCATTTACTAATGCAAGACCTAGCATGCAGCAAGTCATGGAGTACCTTGAAGGTGATACACCAATACCAGAGATTTCATCAAGGCATTTTAGCTTTACTATGCAGGCTTTGATGCAGAGCAAAGGATTTGAATCACCAGACATGTTATGCCCACAGTTTACGAGTATTGGCACATTCTCTGAACTGTCAGGGGGAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024476