Os06g0137700

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0137700| Description = Similar to GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose dehydratase 1) (GMD 1)| Version = NM_001063270....")
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Gene Name

Os06g0137700

Description

Similar to GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose dehydratase 1) (GMD 1)

Version

NM_001063270.1 GI:115466271 GeneID:4340050

Length

2754 bp

Definition

Oryza sativa Japonica Group Os06g0137700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2016927..2019680

Sequence Coding Region

2016929..2017400,2017455..2017972

Expression

GEO Profiles:Os06g0137700

Genome Context

<gbrowseImage1> name=NC_008399:2016927..2019680 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2016927..2019680 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgccgcggaaggtggccctggtgacgggcatcacggggcaggacgggagctacctgacggagctgctcctcggcaagggctacgaggtgcacggcctcatccgccgctcctccaacttcaacacccagcgcctcgaccatatctaccacgacccgcactcccagccgtcgacgccgcgccccccgatgcgcctccactacgctgacctctccgactcctcctccctccgccgcgcgctcgaccacatcctccccgacgaggtctacaacctcgccgcccagtcccacgtcgccgtctccttcgaggtccccgactacaccgccgacgtcaccgccaccggcgcgctccgcctcctcgaggccgtgcgcctcgccagcaagcgcatccgctactaccaggcggggtcctccgagatgttcggctccacgccgccgccgcagagcgagtcctcccccttccacccgcgctccccctacggcctcttcgcctgcaacggcgtgctcttcaaccacgaatccccacgccgcggcgagaacttcgtcacccgcaagatcacccgcgccgtcggccgaatcaaggtcgggctccagaccaaggtcttcctcggcaacctctccgccgccagggactggggattcgccggggactacgtcgaggcaatgtggcgcatgctgcagcaggacaagcccggcgactacgtcgtcgccaccgaggagtcccacaccgtcgaggagttcctccaggccgccttcggctatgcagggctcaactggaaggatcatgtagtcattgacaagaagtacttccgccccgccgaggtggacagcctccagggggatgcaaccaaggccaggaaggagcttgggtggaagcccaaggtcgggttccagcagctcgtcgagatgatggttgataacgacattgagcttgccaagaaggagaaggtcctcgtcgatgccgggtaccgtgatcccaagcagcagccatag</cdnaseq>

Protein Sequence

<aaseq>PPRKVALVTGITGQDGSYLTELLLGKGYEVHGLIRRSSNFNTQR LDHIYHDPHSQPSTPRPPMRLHYADLSDSSSLRRALDHILPDEVYNLAAQSHVAVSFE VPDYTADVTATGALRLLEAVRLASKRIRYYQAGSSEMFGSTPPPQSESSPFHPRSPYG LFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQTKVFLGNLSAARDWGFAGDYV EAMWRMLQQDKPGDYVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDKKYFRPAEVDS LQGDATKARKELGWKPKVGFQQLVEMMVDNDIELAKKEKVLVDAGYRDPKQQP</aaseq>

Gene Sequence

<dnaseqindica>3..474#529..1046#cgccgccgcggaaggtggccctggtgacgggcatcacggggcaggacgggagctacctgacggagctgctcctcggcaagggctacgaggtgcacggcctcatccgccgctcctccaacttcaacacccagcgcctcgaccatatctaccacgacccgcactcccagccgtcgacgccgcgccccccgatgcgcctccactacgctgacctctccgactcctcctccctccgccgcgcgctcgaccacatcctccccgacgaggtctacaacctcgccgcccagtcccacgtcgccgtctccttcgaggtccccgactacaccgccgacgtcaccgccaccggcgcgctccgcctcctcgaggccgtgcgcctcgccagcaagcgcatccgctactaccaggcggggtcctccgagatgttcggctccacgccgccgccgcagagcgagtcctcccccttccacccgcgctccccctacgccgccgccaaggtcgccgcccactggtacaccgtcaactaccgcgaggcctacggcctcttcgcctgcaacggcgtgctcttcaaccacgaatccccacgccgcggcgagaacttcgtcacccgcaagatcacccgcgccgtcggccgaatcaaggtcgggctccagaccaaggtcttcctcggcaacctctccgccgccagggactggggattcgccggggactacgtcgaggcaatgtggcgcatgctgcagcaggacaagcccggcgactacgtcgtcgccaccgaggagtcccacaccgtcgaggagttcctccaggccgccttcggctatgcagggctcaactggaaggatcatgtagtcattgacaagaagtacttccgccccgccgaggtggacagcctccagggggatgcaaccaaggccaggaaggagcttgggtggaagcccaaggtcgggttccagcagctcgtcgagatgatggttgataacgacattgagcttgccaagaaggagaaggtcctcgtcgatgccgggtaccgtgatcccaagcagcagccatagaattggctaccatatggtttggttcttgggagattggggttgcattattacctagaaactgatacattgtggctgtcacagaagaggtgggctcaagttaaccatcggtgtttccttgaggtaggaataaggagtgttgctgtttgatcgatcctatagtgcttttcattacgttttactatgtcatattgctgtgtcctcttaacagataataataataaacgagtcgatgccatttgcaaagaaatgtgtagttatgtgtcttactatgaaacaagatttgtccttctgtatcgtggatcgatgccatctctattctcttagcactttgtaacatgtggttagtgcacaattggaaaaatgaatcttctgtccatattattctcatgttgatagaatgtactgaactcctggcctgtagttcaatggaaatcttggactcaagccctcatttgttgatctaggtaagtgacttggtgggtctaaactatgtgttcctgaagtttacggatggcatatctgataaaaagtcagcaccagtttcgtatcttgcatgtaaggcgggaggacatatgtgacaaaatggccttcaggacaagcattgtgagtattgtattgccttccctttgtatcctgtctatggtggtaaattgaccttcagcagccaaaatacttaacggttgtttggcggggttttggttttctttggtgtccctgtcatggattgtgagtttgagatgaggattgagcttcttaggaactgaaaaggacatgatgattgtctgtactattattgttaatcagcatagtttccattggatgtaagttagcatcaatcttattgttcagacagctcttctctgagcctattgtcgaacaatgcaagatctcagttttgataactgtacgctacactatgagctattgctcactcatctgcaacatctgattgatttgggattttatgggttttctgttgtcatattgcaactaaagtttcttttcaaggtgattttacctgttcacatttttgtgcatcttctgtaatgtgattatgtgaaccaaatattctagttcgccctaccatgtaaatgaagtaatgccatgcatttcaagtctccaagtcctgcccatgatcttcaatattgtgagggtaagacttcttcacatttcacaactacaaattcatggtcatgtgtaagttactttcaaacatgaatatttccataccgattgtgaatcaaatcacaaacatactgtacgtattgctgcatttactatatctgactttgaaaatgttcaagtggcatttggttctgtgatcaatgtactttgtcctcaatgaattttcctttgtcatgagcacctgacttgtctttctgttgaataccggcacagcgcgtattgacaattcaccgattcaggctgtgttatgaagacggagcaccggattatacaagtagtcaggcactgttattctgtgaagctgactttcactgatccatccaccgacgcatcatcagaattgataaggaggagcatctgttctgttctgtagtttaacaggcccacccagatctgattcatttgattacctttcgttttcagatgaaaccatctggcacctgcgatccaaagaggccttgaaagctggtccatgtttatcttcagaaaccagaataacaagtccatggcttattgacatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0137700, RefSeq:Os06g0137700