Os06g0139000

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0139000| Description = Conserved hypothetical protein| Version = NM_001063278.1 GI:115466287 GeneID:4340059| Length = 5003 bp| Definition ...")
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Gene Name

Os06g0139000

Description

Conserved hypothetical protein

Version

NM_001063278.1 GI:115466287 GeneID:4340059

Length

5003 bp

Definition

Oryza sativa Japonica Group Os06g0139000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2056222..2061224

Sequence Coding Region

2056559..2056939,2057034..2057180,2057282..2058094

Expression

GEO Profiles:Os06g0139000

Genome Context

<gbrowseImage1> name=NC_008399:2056222..2061224 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2056222..2061224 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaatgcgggatgctgcccgagctgcctgtgtgtctcattcctttctaagttcctggagatgccaccccaacctcaatttcagtagtgaagcattggggttgagcaaaaatgcatatggaaacgaagaattggctggacttttctacagcaaagtcaaccacattctcaaaaggcactcaggcatcggcgtgaaaaaactgacgattaaggtatattcagattatagtgggaagggctcttcatatctcaacaattggcttcagattgctgttaaaccagggattgaagaactcataattgcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttagtggcttaagaagtctgacgagattgtatctttgtcgtgtgcgtattaccgagaacgagttaggctgccttctttcccattctcttgcattggagcagttggaaatcaggtactgcaataggatagtttgcctgaaggtaccttgcctactgcaacggctcatctccctgaaggtgtttgggtgtgacaagttgaaactgatagaaaatgaagctcctaatgtctccatgtttgcatttcaaggggacaaaacggaactgaaacttggagaaactttgcaaataaagagcctatgcatggtccgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccctaaagtcatgcaaagagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattggccttattggatttttcccagcctatgactatttatccctggcttcttatatttatgctgcaccttctctggagacttttgacttgaatgtaatgcagcggaacgtgcagagtgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagaagcatcacaaccttaagagtgtgacggttacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgagagtacagcttcactcgagtgcttgacattggatgcttctcagactggttttaggtgtgatactccaggcagcaaaatcagcaaatgccccccactagatagggacattatcatggaaggtcacagaggggtcttggctatcagaagatacatccagcctagggtaccttccacagtgaagctgactgttttggagccctgcagctgccattccactgaactttag</cdnaseq>

Protein Sequence

<aaseq>MPMRDAARAACVSHSFLSSWRCHPNLNFSSEALGLSKNAYGNEE LAGLFYSKVNHILKRHSGIGVKKLTIKVYSDYSGKGSSYLNNWLQIAVKPGIEELIIA LTQFQAKYNFPCSLLSNGSGDSIQYLHLSNCSFHPTVTLSGLRSLTRLYLCRVRITEN ELGCLLSHSLALEQLEIRYCNRIVCLKVPCLLQRLISLKVFGCDKLKLIENEAPNVSM FAFQGDKTELKLGETLQIKSLCMVRSGYVYHARAELPSIMPNLESLALKSCKETAFAP KLCSKFLCLRHLSIGLIGFFPAYDYLSLASYIYAAPSLETFDLNVMQRNVQSVSIFAH PADLRSIREEKHHNLKSVTVTSFISVKSLVELTCHILESTASLECLTLDASQTGFRCD TPGSKISKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLTVLEPCSCHSTEL</aaseq>

Gene Sequence

<dnaseqindica>4286..4666#4045..4191#3131..3943#gggctccttcctaaaattataactctgatatctatatctatcttgcctacaaattataactctcgttccccaattttgtgtgtgacgttgagaagtgccgaccggcgacgacgaaaggccggcggagagagatcccctcaccaccatggggatgctggatctgatgcgcctcatgtccatccagcgccagcgggaccaggagcgccgccgccgccaagcccaagctcccccccgtggtaaagaaactactcctcataagcttcctctcccacctccctctgtcactctctggtcaagcggcggcagcagcagcagcttcttgcgtttacggtgggggaagggaaccagatggacttgcttgcgcctctttttcctgtttcgttgggtgggtgtttatttagttttcttcacactagtttgtgtcgattattcgaatctgtatatatgtagtactagtatatacacaaaccaaaaagaaaaaaaaacatgtttttattgagcgcaaggtaggagatcaaaggtggtttatccgatccgccatggctggtggccggccaccaccgtcttgttccttttctctttaactagattgacgagacgtagggagagagactacactgtaactataaggtacccgcgtgttgctgcgggaattcttagaacaatatttgtgcgtatggtcgcatggatagcaaaaacactgaattgcattgaagtaagacaacctctttttgtgtgaatatggagttacggttttgttcaacattcaaatcagttgtgaaatatgaggatatatatcttggtagctgacaatttagatattaccgtgggcaacagaaaaagaaaaatgtttagtaatactgtgagaacttggctaatgatgataattcaaaatcatatacattgctccccaagttggataacagggttagcaaaaaaaaattcatattcagatatgaaagaaggttcagcagataaacatggctattaaaattcagttaccgaacaaggttcaccaactaaaaatttccatcaaaattaagagttttacgcacctcaatattatacttagactacgaatcaaccaactgatggtcttgtttcctgcattcttcaattgcttaaaaagaagaaaaggatctgacaatgaaaccacagctacatagggcatcgacagaaagtggttaaagttgtaactgcatatctacatagcagcatacgatagacacataattgaaaggtccagattagcatagcttcaagcatcataaaacatgaagctagtcatgggtggaaagattctgtggaaggacagggataataagcatattgatttgaacctgcgggagtggcatatcctgagagagataagttgtgttgggaaggctcatcagctagtgtcgttgaccagagtgagtttgtcatcgtcgccggaggatacagctcgtctttctctctcccatgaagatctggcagcatagctgagagcctttgagaggaaaggagaaggcatattgagggtaataaatgtccatggcggctgtcacttcaactcctagctgtttcaggttttgatagcgcgtttcagcctttcaggcgagggagactcaaaggtggacatagaagccgaatggctcagttctcttgcgtcgtgttgcgctgagagtggagatggaacgataggaggtaggatgttctggggtacgtaggaacgtttggttgggttttctgtgtgagagacactacattcaatctgatggaaattaaggggtgatgtggcaaagcgagatgaccaaaaaaatactattaattgcactaagtggggatgaattgtatcggtttataggatactatactatgcaaaataagaaaaatactatatgacatgctgaacttcagacatttccccttaaattgataacactttgatttcttttacaaactgttagtgttgttgtacaaaaggggacaaaaaaaaaaataacggattgccatgtgtgcaatggtgtgcttgcttgaattttctgtttattcctgaaatggatgtaaaccatgcatcttgtgctgcagatggattgattgctttacgggctaaaagaaaagggctcaccctgccaacaagacggcgattctcagggtgctgctgacatagagataccaagccttccagaggtacaccataaataaaatgttgatgatgaaacatcttactagtagtgtagtacaagtaaattatgacgattactgcttgaatcgcacaaatcggtcgaccaacgttattaaagtttatgaacggagcactttgatgctataacctcctacagctgctgcattggaactgtttttccagctgttgcacttactttcaattacaagttgtgtccacataatgcttgcttctaagctggtggttcttaggctgggagtttctcaagtcaacgtcaatgattagcctttgccactagtctccatactgtttctaacttccttaaattttaacatctcaaaaatggttccttgctaacaaatgtgacatgttatctccggtaggccattgcaggcagtacatggtaattttgtgagccacatgtccttgtaggatggcattcttgtttgattccccgcatctccccatcctgactccccgcatcttccccatcctgagttcctgacctagtgtatgaaaatccaagcaagcaaccaaacacacctttagttctgttacatatttaactgatctttctggttgtttatatattcagatattggtaccctatgcaaagtgcatgtccatttctgttccttttatgccattgaataacatgctattagacaattaaacatcattccatccattttatctggcacaattgcaaagaaacaaatagtgccgagcacctaatacatgatttgggtaagaccatatttgcctagcagaagtcaactatacaattcatagtacaatagtacataatcaggcaggtagcactggaccggttaaagtgttaactccataagttaccattttttttcttccatctaattcaaccatctgtcttcacaattccaatggttaacttctctcccatgcttgtgcaagcaggacatctggcgtcttatacattccttgatgccaatgcgggatgctgcccgagctgcctgtgtgtctcattcctttctaagttcctggagatgccaccccaacctcaatttcagtagtgaagcattggggttgagcaaaaatgcatatggaaacgaagaattggctggacttttctacagcaaagtcaaccacattctcaaaaggcactcaggcatcggcgtgaaaaaactgacgattaaggtatattcagattatagtgggaagggctcttcatatctcaacaattggcttcagattgctgttaaaccagggattgaagaactcataattgcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttagtggcttaagaagtctgacgagattgtatctttgtcgtgtgcgtattaccgagaacgagttaggctgccttctttcccattctcttgcattggagcagttggaaatcaggtactgcaataggatagtttgcctgaaggtaccttgcctactgcaacggctcatctccctgaaggtgtttgggtgtgacaagttgaaactgatagaaaatgaagctcctaatgtctccatgtttgcatttcaaggggacaaaacggaactgaaacttggagaaactttgcaaataaagagcctatgcatggtccgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccctaaagtcatgcaaagaggtatgagaaattttacctgacacactaatgataggcatatctaatgagactagattctgtcttatgggttgtagcataattaatttgacctctttatgcagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattggccttattggatttttcccagcctatgactatttatccctggcttcttatatttatgctgcaccttctctggagacttttgacttgaatgtgagtagctgttcatatattattactgctatgaatgaaattagtagctgtgtggtggaaatgtcacttaaaatttctccctttcacatcctaggtaatgcagcggaacgtgcagagtgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagaagcatcacaaccttaagagtgtgacggttacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgagagtacagcttcactcgagtgcttgacattggatgcttctcagactggttttaggtgtgatactccaggcagcaaaatcagcaaatgccccccactagatagggacattatcatggaaggtcacagaggggtcttggctatcagaagatacatccagcctagggtaccttccacagtgaagctgactgttttggagccctgcagctgccattccactgaactttagatgtcatgtttatcttagttattcgatgtttaatcgtgctgctgctgatgatgattctgtagattcttagatgggtcatggtttctaaagtttgctcttaatgattactactagttgatatcataaccaatgcacatgatatccactagtaactctagtttccacctagcagcagtgttgtatgcacattaaaaagttcttactagcagaagttctcgaacgtttgatttacctacttgtggccttgtgggttataaaaagctaaacattagagtttgtaacaaattttagtgtgtagcctttaatttcttttcacctatatatgcatcggtttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0139000, RefSeq:Os06g0139000