BGIOSGA024705

From RiceWiki
Revision as of 16:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024705

Description

cDNA clone:J023135J22, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024705, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA024705-TA

Ensembl Protein ID

BGIOSGA024705-PA

Length

2202

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4391426..4393627

Sequence Coding Region

4393529..4393627,4393404..4393441),complement(4392679..4393285,4392097..4392601),complement(4391426..4391979

Genome Context

<gbrowseImage1> name=IndicaChromosome07:4391426..4393627 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:4391426..4393627 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGCCCTGCAGCAGCAGAGCAATGGCCATGGCCATGGCGTCCTCCTCGCTGAGGCTGGCTATGCCGAGGTTGATCCCACTGGAAGATATGGCAGATTCAATGAGATTCTTGGCAAGGGATCGTCAAAGATTGTGTATAGGGGGTTCGATGAGTGGAGGGGAGTGGAGGTGGCGTGGAACCAGGTGCGGCTGCGCGACGTCGTGCGGGGCGGCGGCGAGCTGGAGCGGTTCTACGGCGAGGTCCACCTCCTCGCCGCGCTCCGCCACCGCGGCATCGTGCGCCTCCACGCCTACTGGGTGGACGCGCCGCGCCGCGCCCTCAACTTCGTCACCGAGCTCTTCGTCTCCGGCACGCTCCGCCAGTACAGGGAGAGGCACCGGCGGGTGAGCGCGGCGGCGGTGCGGCGCTGGTGCGCGCAGATCCTCGACGGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGCCGCGTTCCGCCGCGGCGGCGGCCACGCCCGCTGCGTCGGCACGCCGGAGTTCATGGCTCCCGAGGTGTACGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCATGTGCGTCCTCGAGATGGTCACCCTCGATTACCCCTACAGCGAGTGCTCCAATCCCATCCAAATCTACAAGCGAGTCATCTCCGGGATCAAGCCCGCGGCGTTGTACAGGGTGAGCGACCCGGTGGTGAGGCAATTCATCGAACGGTGCCTCGCCCCGGCGGCGCGGCGGCCGGCGGCGAGGGAGCTGCTCGACGACCCGTTCCTGCTGCCGCTTGAGGATGATGGCTTCTTCTCCGGCGACGGCGGCGATGGACATGGCGGTGTTGGCGTTGGCTACTACAATCTGATGTACAACTACCTGCACCAGCCTGCTTGCATCGACGACCACCATGCCTGCAGCAATGGCGGCTTGTCGCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCCGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCGACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTTATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MGALQQQSNGHGHGVLLAEAGYAEVDPTGRYGRFNEILGKGSSKIVYRGFDEWRGVEVAWNQVRLRDVVRGGGELERFYGEVHLLAALRHRGIVRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCVGTPEFMAPEVYDESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVVRQFIERCLAPAARRPAARELLDDPFLLPLEDDGFFSGDGGDGHGGVGVGYYNLMYNYLHQPACIDDHHACSNGGLSPSNSVGDNDVDAAVQPGDDDGDNWLRDIHMLFDEDDDDAAAADADERVGGVDITIKGRRTDDGGVYLGLRIADKNGTGRGRIICFRFDTEADTAMTVAAEMVAELDITDHEVTRIAQLIDGKVAALVPGWRPGPATDDDDDDDLVGGGDDPDAPGGAAAACCKNCRPAASSSSSSCGSLVDFMSSAAAAERHGCRRCAELHGRFEEITFQADDDEEEQHLQGSSSDTGGSNHEQHAMGKDKEVMNINGIAQDGTVQGSEQP</aaseq>

Gene Sequence

<dnaseqindica>1..99#187..224#343..949#1027..1531#1649..2202#ATGGGAGCCCTGCAGCAGCAGAGCAATGGCCATGGCCATGGCGTCCTCCTCGCTGAGGCTGGCTATGCCGAGGTTGATCCCACTGGAAGATATGGCAGAGTAATCATCTACTAATCCCATCTCATCGTCTTCTTCCTCCAGCTTCTTCTTACCTTGTTTCTTAATGCTTCCTCTCTCTCTCTGCAGTTCAATGAGATTCTTGGCAAGGGATCGTCAAAGATTGTGTAAGTTCATCAGATGATCCAATTTATTCTCCTAAATTAGTTTAATCCTCTGTTTGATTGTGTTTCTTGATTAGAATTTGAGTGTTTGATTGATTTTGGAATGATTTTTCGGGTGCAGGTATAGGGGGTTCGATGAGTGGAGGGGAGTGGAGGTGGCGTGGAACCAGGTGCGGCTGCGCGACGTCGTGCGGGGCGGCGGCGAGCTGGAGCGGTTCTACGGCGAGGTCCACCTCCTCGCCGCGCTCCGCCACCGCGGCATCGTGCGCCTCCACGCCTACTGGGTGGACGCGCCGCGCCGCGCCCTCAACTTCGTCACCGAGCTCTTCGTCTCCGGCACGCTCCGCCAGTACAGGGAGAGGCACCGGCGGGTGAGCGCGGCGGCGGTGCGGCGCTGGTGCGCGCAGATCCTCGACGGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGCCGCGTTCCGCCGCGGCGGCGGCCACGCCCGCTGCGTCGGCACGCCGGAGTTCATGGCTCCCGAGGTGTACGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCATGTGCGTCCTCGAGATGGTCACCCTCGATTACCCCTACAGCGAGTGCTCCAATCCCATCCAAATCTACAAGCGAGTCATCTCCGTATGATCTGATCACCACAGAATTTCTCGTGAATTCTTGGACACGATTTGATCAAGAGAATGCGTGTTTCTGATCAGGGGATCAAGCCCGCGGCGTTGTACAGGGTGAGCGACCCGGTGGTGAGGCAATTCATCGAACGGTGCCTCGCCCCGGCGGCGCGGCGGCCGGCGGCGAGGGAGCTGCTCGACGACCCGTTCCTGCTGCCGCTTGAGGATGATGGCTTCTTCTCCGGCGACGGCGGCGATGGACATGGCGGTGTTGGCGTTGGCTACTACAATCTGATGTACAACTACCTGCACCAGCCTGCTTGCATCGACGACCACCATGCCTGCAGCAATGGCGGCTTGTCGCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCCGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCGACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGTACGTGATCGTTGCATTTTTGAACTGGCGGGTGTTCAAATTTGATTTGATTTATAATACAAAATGATGTCAAATGTGGGGGCGAATTTCGTCTGAATTCGAGCTGAATTGTGGCAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTTATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024705