Os06g0141100

From RiceWiki
Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0141100| Description = NUDIX hydrolase domain containing protein| Version = NM_001063292.1 GI:115466315 GeneID:4340074| Length = 2674 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0141100

Description

NUDIX hydrolase domain containing protein

Version

NM_001063292.1 GI:115466315 GeneID:4340074

Length

2674 bp

Definition

Oryza sativa Japonica Group Os06g0141100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2156904..2159577

Sequence Coding Region

2156904..2157169,2157444..2157536,2157941..2158040,2158643..2158747,2158841..2158981
,2159065..2159577

Expression

GEO Profiles:Os06g0141100

Genome Context

<gbrowseImage1> name=NC_008399:2156904..2159577 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2156904..2159577 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatccacctccgcgcccacgccttcgcggcgagccctctgcgcggcctctccgcctccaccgccgccgtctccccgtcggccgcggccgacgccctccgctccctcctcgacgcgggggccggggcagccgacgccgcgcacccgcacccgcacccgcacctctccaagatcctccccttccgccgcggccgccccctcgcgcgctcctacgactctcctcctccccccgctgccgcggccgcggcgccgccgcctcctcccgcctggcgcctcgcgtggctcccgcccgcgcgcgtccccgacgtgccctcggacgccttcgtgttcctgggcgcgcacggcgaggaggaggggaaggaggccgcggcgtactgggccgtcgatgtgagcgagcgcgacggggagggcgccggggatgggtcggcgtttgtggatttgaggacgctcatggtggccacggactggagggacaaggacgccatgggagacctcgccatcgcgggccacgctcgggcgctgctagaatggcatagcacagcaaaattctgcggagcttgtggatcaagggctgttcctgctgaagccggaagacggaagcagtgcagcaatgaatcctgcaagaagaggatataccctcgagttgatcccgttgtgattatgttggtcatagataaggaaaacgatcgtgcgctcttaagccgccagtcgagatttgtgcctcgaatgtggagctgtcttgctggttttatagagccaggagaaagcttggaagaggcagtgagaagggaaacgtgggaagagactggtattcaagttggggaagtcatttatcacagttctcaaccgtggcctgttgggccgagtactatgccatgccaactgatggtgggattctttgcttacgctaaatcattggagatacatgttgacaagaaagagcttgaagatgcccaatggcacagccgtgaggatgtcaagaaagcactaacatttgcagaatacgagaaagctcagagaacaaatgcgctcaaggtcaatcaaatatgcaagggtgttgagaaaaggcagagcatctctgctgacctcaaaatcgaaagtgaggagcctgctccaatgttcgttcctgggccctatgcgattgctcaccacctcatatcatcatgggcttttgaaggagcaccaaaggcacctagctccttctccaacctatga</cdnaseq>

Protein Sequence

<aaseq>MSIHLRAHAFAASPLRGLSASTAAVSPSAAADALRSLLDAGAGA ADAAHPHPHPHLSKILPFRRGRPLARSYDSPPPPAAAAAAPPPPPAWRLAWLPPARVP DVPSDAFVFLGAHGEEEGKEAAAYWAVDVSERDGEGAGDGSAFVDLRTLMVATDWRDK DAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDP VVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGE VIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFA EYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAF EGAPKAPSSFSNL</aaseq>

Gene Sequence

<dnaseqindica>2409..2674#2042..2134#1538..1637#831..935#597..737#1..513#atgtccatccacctccgcgcccacgccttcgcggcgagccctctgcgcggcctctccgcctccaccgccgccgtctccccgtcggccgcggccgacgccctccgctccctcctcgacgcgggggccggggcagccgacgccgcgcacccgcacccgcacccgcacctctccaagatcctccccttccgccgcggccgccccctcgcgcgctcctacgactctcctcctccccccgctgccgcggccgcggcgccgccgcctcctcccgcctggcgcctcgcgtggctcccgcccgcgcgcgtccccgacgtgccctcggacgccttcgtgttcctgggcgcgcacggcgaggaggaggggaaggaggccgcggcgtactgggccgtcgatgtgagcgagcgcgacggggagggcgccggggatgggtcggcgtttgtggatttgaggacgctcatggtggccacggactggagggacaaggacgccatgggagacctcgccatcgcgggccacgtgcgtggcgattattttgttgttatcagagacattcgaattactacattttttgtggttgattggatttctgattcgagcaggctcgggcgctgctagaatggcatagcacagcaaaattctgcggagcttgtggatcaagggctgttcctgctgaagccggaagacggaagcagtgcagcaatgaatcctgcaagaagaggatataccctcgagttgatcccgtatgatttgtgctcaattcctgacctatcttgcagttggagatggcacctgttgaatttgacgttttgttatccctatttggtgtattgcaggttgtgattatgttggtcatagataaggaaaacgatcgtgcgctcttaagccgccagtcgagatttgtgcctcgaatgtggagctgtcttgctggttttatagaggtgcaaattagctcttagttttcatgatttcttatgtttaatgttcagatcttttcttcataataatatgtgcttagttccattcctttcacttgtaattttcttatgctggttttggtttggatgaaacagaaggatgctatagataacttggttgtattacacccattgttactgcatactgcacaatcctggttagatcttatttgtgagttggtgggatggttagatcttatttgttagttggtgggaggaccggaggagtgtatgtacacacccaccacacaagtttggatcctctagggctaacttggattcatcttcccccgtgggtatcctcattttatttatttttttaaaaaaagagttaccatatcctcattagccatgcttgtaatttgtaggagattatttagagcacttcactatcctaactatgatgaattcattccaaatactgaaaagtaacttgttttcttgtttaagttttgtcctatgcttatgctaacttcaactttctgtggtactagcaagttcatttcattatcatcttgccgtgcactgaaagaagcttacacatgctgcaactgttctttttgtagccaggagaaagcttggaagaggcagtgagaagggaaacgtgggaagagactggtattcaagttggggaagtcatttatcacagttctcaaccgtggcctggtaatgaattgttcttaccatatatctttcgaatgaaaaacacaggaaaggataacactagaagataagaaatatgttttaacctttctaattatcgtatcaaaatacagaagtacttataatgaaagatactaggcaagaactatatcaaattaaagtaataagaagaaataggtagaggacttgggcggtggtggtggtgtacatgcataccaagagacatgtattagggctccctttggcattagagtgtattctcaaaacaaaattatttgtgctttgggatatattatgagctgttatcgtctttttcttgagttgtagagaaaagtcttaatagaatcagtgacaatctccctaacccactctgatagtatccatgttgcttccgatgcttttttcagttgggccgagtactatgccatgccaactgatggtgggattctttgcttacgctaaatcattggagatacatgttgacaagaaagagcttgaaggtttgtcagtatgaaatgttattttttttcctactcttttttgcaactgattggcctggtccatccatataatcctacgtttcagtcggtcttctgttatttttcttatgcaatcttacaagaatatttagatactaactgagtaaaacttatctaattgttaaattggtgatctgtaatacatcgaagatacttttctacaatgaacttcataatagttctgcgcagaccttttagttctcatctctcgaatgccattcttttaccaatgtagatgcccaatggcacagccgtgaggatgtcaagaaagcactaacatttgcagaatacgagaaagctcagagaacaaatgcgctcaaggtcaatcaaatatgcaagggtgttgagaaaaggcagagcatctctgctgacctcaaaatcgaaagtgaggagcctgctccaatgttcgttcctgggccctatgcgattgctcaccacctcatatcatcatgggcttttgaaggagcaccaaaggcacctagctccttctccaacctatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0141100, RefSeq:Os06g0141100