Os06g0142000

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Gene Name

Os06g0142000

Description

Similar to Ribosome biogenesis regulatory protein homolog

Version

NM_001063299.1 GI:115466329 GeneID:4340081

Length

4425 bp

Definition

Oryza sativa Japonica Group Os06g0142000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2188914..2193338

Sequence Coding Region

2188914..2188998,2189318..2189415,2189496..2189762,2189915..2189956,2190080..2190087
,2190239..2190282,2190624..2190704,2190788..2190916,2191026..2191123
,2191197..2191457,2191546..2191590,2191757..2191890,2191974..2192054
,2192136..2192317,2192641..2192755,2192882..2193065,2193153..2193338

Expression

GEO Profiles:Os06g0142000

Genome Context

<gbrowseImage1> name=NC_008399:2188914..2193338 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2188914..2193338 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggaaagctaagaggggcggtggtgatctccctagaagctttcataagaatagtagagccttcaagaatgagtggatctcaggcatagctatagaacaccagttttttacaaagtttttgactactgcaactctggttagagctcttaatgctacgaccaaacaccatgatgacttaaagattcaagtgcgccttgacggcaccagactgtatgatgggtatatggctgaatatgatttggataatgacttttctgttgtcgaagtctatagtgtccgtgatgttcaggttggacctttccaaagtgcacttgaaagtctgccccatggtgaggtattagctgtagggcatgacacctccggcgaaataatggtcgagactgtggagttgaatggcgattcaaaggtatccgaggatgatagagatcttcattgtaaaatctcaaagccttgggaaggtgggccgcttctttctgttgatggggatatggttcacaggcctgaagcatccataggtgagaaatctaacagccatccagaagtacatggagattttctcaaccaggaacagttagatcttgactccatgggttatcctaagttaccatcctccatgttaggagctggcatgatcttggttaattcttttgaagacccttttggcgacatatatggtgaaggtgtctggagaaaattcagcagaagagcttctatcctaaatcgcaatgttgtcgcactggcttcattcaatggtttttttattgaatggagtggatctaagatgattttgacatcagcgagcttggttagagattctggtgatgagaacaagattgatgaaaacttgaggattaaagtgtttcttaacaaccaatgcaaagaagggaagttagagcattgcaatctacattacaacattgctctagtcagtgtcaagtaccgtgctcttcgtccattaaatacgagctttgattgcaagtcttctagagtagtggctgtagggcgttgcttcaattctggcacgttaatggctactagtggtcgtctagttccttggacaggcacacttgactgccagttcctcgcatgttccacatgtaaaattactaagttaaaatatggtcatggtaaagtactttggaatatgaatcgaacggctgggattggaagccctcttgttaatcttgatggcaatgttattggcatgaacttctatgacacaagaattggaactcctttcttattatgggaagagatctgcaagattctagcatcgtttgagacaaaaagtgaatctagtggtgatattggcaatgcctctggtgcgtgtttctggaaaatgccaagagatgtcaaaaataaggttaacaggtggtctgtgcccaagccacgctggtgccgtcctgaagatgctgaatctgatgatgatgataagttagcttttgatgatactggccagcttcaatacagttatattttgggacggaaagtcaagctccttcgtctcacaatccccatatcggttccgattgttgaagctaaatccactgatgagcctggagttgatcctttcgcacaaaggaagcaaaagaagaagcgggtagaaaagcaaggaaaaaacagactagagaacttaaagaaagctgcaaaagttggtgctttgccaagtcatatacaacttgctgcaacgtccttgcccatcacaggaactaaagctgatcttccgaaaaaatctagaaaagaggatcttgagaatgttgctggcatgggatctgcaacagcaagtggtgggaagtttgatgagaagttgcctggcgagaaacctccaaagcatcctggcaaacataaaaagtttatcccagttgctgaaggggagggaatgggcaacctggggaaacagcagaatgacaaaattctgatgtctctacttgccagaaactctgaacagcttgatgtttgcaaggcaagttccaggattcaatggagtatattaaattgtgttttgcccaccatcattggcactgcttgttctgtttga</cdnaseq>

Protein Sequence

<aaseq>MWKAKRGGGDLPRSFHKNSRAFKNEWISGIAIEHQFFTKFLTTA TLVRALNATTKHHDDLKIQVRLDGTRLYDGYMAEYDLDNDFSVVEVYSVRDVQVGPFQ SALESLPHGEVLAVGHDTSGEIMVETVELNGDSKVSEDDRDLHCKISKPWEGGPLLSV DGDMVHRPEASIGEKSNSHPEVHGDFLNQEQLDLDSMGYPKLPSSMLGAGMILVNSFE DPFGDIYGEGVWRKFSRRASILNRNVVALASFNGFFIEWSGSKMILTSASLVRDSGDE NKIDENLRIKVFLNNQCKEGKLEHCNLHYNIALVSVKYRALRPLNTSFDCKSSRVVAV GRCFNSGTLMATSGRLVPWTGTLDCQFLACSTCKITKLKYGHGKVLWNMNRTAGIGSP LVNLDGNVIGMNFYDTRIGTPFLLWEEICKILASFETKSESSGDIGNASGACFWKMPR DVKNKVNRWSVPKPRWCRPEDAESDDDDKLAFDDTGQLQYSYILGRKVKLLRLTIPIS VPIVEAKSTDEPGVDPFAQRKQKKKRVEKQGKNRLENLKKAAKVGALPSHIQLAATSL PITGTKADLPKKSRKEDLENVAGMGSATASGGKFDEKLPGEKPPKHPGKHKKFIPVAE GEGMGNLGKQQNDKILMSLLARNSEQLDVCKASSRIQWSILNCVLPTIIGTACSV</aaseq>

Gene Sequence

<dnaseqindica>1..85#405..502#583..849#1002..1043#1167..1174#1326..1369#1711..1791#1875..2003#2113..2210#2284..2544#2633..2677#2844..2977#3061..3141#3223..3404#3728..3842#3969..4152#4240..4425#atgtggaaagctaagaggggcggtggtgatctccctagaagctttcataagaatagtagagccttcaagaatgagtggatctcaggtctgctagatcttttcctcttttctgctacacccctggcgttttcacagtttatgtgattattcacagctgctttatgttttattttcttcaactaggtgacctccttcggaactctaagcaagatgtttggactggtctcagtgatgggcttaaatcatatttgtctaaaagtgtcgcttctattattttgttcaatggtgattatatacgcttagtcttctcagttttctaacaagtatatattgaaatgccaccagttataaatgattcaacttgcgatcttctgtaggagacaaaatcttattttcatgctcaggcatagctatagaacaccagttttttacaaagtttttgactactgcaactctggttagagctcttaatgctacgaccaaacaccatgatgacttaaaggttggtgctgacagtcatcctttactaatctgtttacttctgatcattgtgtgctcatttctcgctttttcattttttagattcaagtgcgccttgacggcaccagactgtatgatgggtatatggctgaatatgatttggataatgacttttctgttgtcgaagtctatagtgtccgtgatgttcaggttggacctttccaaagtgcacttgaaagtctgccccatggtgaggtattagctgtagggcatgacacctccggcgaaataatggtcgagactgtggagttgaatggcgattcaaaggtatccgaggatgatagagatcttcattgtaaaatctcaaaggtacacttgcatgatgatatgagcatttcatttttatttctgttaggcatggaggcaacagaaatatttgatttcttgtttgtatttaactcttgttctgtacaactttattttgttcaaatgtaacccgtgttgcttgttttatttcttagccttgggaaggtgggccgcttctttctgttgatggggatatggttggcatgaaccttttttttaccaatagaagagccatttttctaccatggggcacaactctcaatcattacttgacattcgtgcaaaagaagactggccttgtacaataaaaaaaaatgaaggttcacaggtatgtctatttaatcctcgcttctctgtcttgttccttgcctatgattctacccacatagtgtttggcaccatttttcgtataagtgcactggtttgatccattttactttttgattagtagtcaactagtcattttttatgatctgcaggcctgaagcatccataggtgagaaatctaacagccatccagaaggtgagcacacaggcactcctcacaagtgcttaacatcatattgttatgcaaattattgagttcgtaatggtacctatttagaagctgtgcaagcgtttacatttgtacatcaattattccggccctttcagtagtactcttgtattgttggatcttattagttaacatatgtacaataggtatgttcatgcacgctgacttctaatgctaattgttgctcaggctgttataatgatataactcatgttacatgctatgtatgcgcagagtttatgtgaatttactttttgtgtatagtattagtatatgtcagtgctgatcacttcaccttgttgcaccagtacatggagattttctcaaccaggaacagttagatcttgactccatgggttatcctaagttaccatcctccatgttaggaggtgagtcagtgcttctaaaatttgctgatcttttacagctctcatgtaccactaacaacttattctacaatgtatttatccagctggcatgatcttggttaattcttttgaagacccttttggcgacatatatggtgaaggtgtctggagaaaattcagcagaagagcttctatcctaaatcgcaatgttgtcgcactggcttcattcaatggtgagtttacaacggtgtgacatttactatttcatctctgtttcgattacaactagctggtaaccagaatcatggcatgcaggagaaaaaaggttttttgcatgcacaggtttttttattgaatggagtggatctaagatgattttgacatcagcgagcttggttagagattctggtgatgagaacaagattgatgaaaacttgagggttggtgttcattgttttgtgtctgatgttcttctaaggtgctgtttaaatctgatcactgtattatttgcagattaaagtgtttcttaacaaccaatgcaaagaagggaagttagagcattgcaatctacattacaacattgctctagtcagtgtcaagtaccgtgctcttcgtccattaaatacgagctttgattgcaagtcttctagagtagtggctgtagggcgttgcttcaattctggcacgttaatggctactagtggtcgtctagttccttggacaggcacacttgactgccagttcctcgcatgttccacatgtaaaattactaaggtaataactctcttttttctattaggtgtaatttgactgtctaaaagagagctttgactgtaaattcctgtcattaatttgcttacagttaaaatatggtcatggtaaagtactttggaatatgaatcgaacggtatcttttgatgaaacctagataatattacaattgtgaaagcttgacattggacagactctgctttgtgtttctgacaaagtatatagttgcattggaatgaattagctagcaatgttttcaatagaaaacagtaaatcacaacttatttatgttaacttgctaggctgggattggaagccctcttgttaatcttgatggcaatgttattggcatgaacttctatgacacaagaattggaactcctttcttattatgggaagagatctgcaagattctagcatcgtttgagacaaaaaggtattagcattgttcatgtcagtattctagcattgttcttttttggagcattttaagaagcttgctgaagcataatctgacagtgaatctagtggtgatattggcaatgcctctggtgcgtgtttctggaaaatgccaagagatgtcaaaaataaggttaacaggttggtattccgatccatgttgctatttattaggttgaagttaagttttggatatataagttatttcgttgaaatgaacaggtggtctgtgcccaagccacgctggtgccgtcctgaagatgctgaatctgatgatgatgataagttagcttttgatgatactggccagcttcaatacagttatattttgggacggaaagtcaagctccttcgtctcacaatccccatatcggttccgattgttgaagctaaatccactgatggttagtaatttgtcttcatgaaccttttgccaacaatcctgttgactgttgtgctgactggtctctctccctgatacagtattgcagctctcatattcatctgcttttgttagtcgactccgtccagcaaattttccagcatttttcatatgcagtgctttacccccatttatttttttatatgcagtcatttcatagtttaggacctaaatctgacaaacattttcttactattaatgattctttttctagatgtgcatgtatcctaaacctggttggtcaacctgatatacccttttaatcgacaatttcatttgttacagagcctggagttgatcctttcgcacaaaggaagcaaaagaagaagcgggtagaaaagcaaggaaaaaacagactagagaacttaaagaaagctgcaaaagttggtgctttgccaaggttgtaatcctttactcacctactgcttacccctccctcctatgaattccttttcgtaccagtaaggaacattgagaattatgcagtatagtcatctaacagctctccaatatattttgtgtgcagtcatatacaacttgctgcaacgtccttgcccatcacaggaactaaagctgatcttccgaaaaaatctagaaaagaggatcttgagaatgttgctggcatgggatctgcaacagcaagtggtgggaagtttgatgagaagttgcctggcgagaaacctccaaagcatcctggcaaacataaaaaggtttttatatcttaatggctttgatttatgagtctgcctttgtaggctgaatttgtgaactatagctgaatcatgttgtttctgcagtttatcccagttgctgaaggggagggaatgggcaacctggggaaacagcagaatgacaaaattctgatgtctctacttgccagaaactctgaacagcttgatgtttgcaaggcaagttccaggattcaatggagtatattaaattgtgttttgcccaccatcattggcactgcttgttctgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0142000, RefSeq:Os06g0142000