Os06g0142100

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0142100| Description = Cyclin-like F-box domain containing protein| Version = NM_001063300.1 GI:115466331 GeneID:4340082| Length = 3021 bp|...")
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Gene Name

Os06g0142100

Description

Cyclin-like F-box domain containing protein

Version

NM_001063300.1 GI:115466331 GeneID:4340082

Length

3021 bp

Definition

Oryza sativa Japonica Group Os06g0142100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2194354..2197374

Sequence Coding Region

2194354..2194423,2195237..2195337,2195827..2196666,2196752..2196898,2196994..2197374

Expression

GEO Profiles:Os06g0142100

Genome Context

<gbrowseImage1> name=NC_008399:2194354..2197374 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2194354..2197374 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatgctgaatctgatgcgcctcatgtccgtcaagcgccgccgccgccaagtccaagttccccatgatggattgattgccttacgggctaaaagaaagtgttcaccctgccaacaagatggcgattctcagggcgctgctgacatagagataccagaccttccagaggacatctggcgtcttatacattccttgatgccaatgcgagctgctgcccgagctgcctgtgtgtctcgttcctttctaagttcctggagatgccatcccaacctcaatttcagtagtgaagcatttgggttgaatagaaatgcatgtggaaaggaagaattggctggacttttctacagcaaagtcgaccacattctcaaaaggcactcaggcatcggcgtgaaaaaacttacgattaaggtatattcagattatagtgggaagggctcttcatatctcaacaattggcttcagattggtgttaaaccagggattgaagaactcataatttcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttggtggcttaagaagtctgacgagattgtatctctgttgtgtgcgtattacggagaacgagttaagctgctttctttcccattctcttgcattggagcagttggaaatcaggtactgcgataggattgtttgcctgaaggtaccttgcctactgcagcggctcatctccctgaaggtgtttgggtgcgacaatctgaaactgatagaaaatgaagctcctaatgtctccatttttgcatttcaaggggacaaaacgcaactgaaacttggagaaactttgcaaatgaagagcctatgcatggttcgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccatgaagtcattcaaagagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattgcccttattggatatttcccagcctatgactatttgtccctggcttcttatattcatgctgcaccttctctggagactttctacctgactgtaatgcagcggtacgtgcagaatgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagcagcatcacagccttaagagtgtgagggtcacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgagagtacaacttcccttgagtgcttgacattggatgcttctcagactggttttaggtgtgatactcctggcagcaaaattggcaaatgccccccactagatagggacattatcatggaaggtcacagaggggtcttggctatcagaagatacatccagcctagggtaccttccacagtgaagctgaatgttttggagccctgcagctgccattgtactgaactttag</cdnaseq>

Protein Sequence

<aaseq>MGMLNLMRLMSVKRRRRQVQVPHDGLIALRAKRKCSPCQQDGDS QGAADIEIPDLPEDIWRLIHSLMPMRAAARAACVSRSFLSSWRCHPNLNFSSEAFGLN RNACGKEELAGLFYSKVDHILKRHSGIGVKKLTIKVYSDYSGKGSSYLNNWLQIGVKP GIEELIISLTQFQAKYNFPCSLLSNGSGDSIQYLHLSNCSFHPTVTLGGLRSLTRLYL CCVRITENELSCFLSHSLALEQLEIRYCDRIVCLKVPCLLQRLISLKVFGCDNLKLIE NEAPNVSIFAFQGDKTQLKLGETLQMKSLCMVRSGYVYHARAELPSIMPNLESLAMKS FKETAFAPKLCSKFLCLRHLSIALIGYFPAYDYLSLASYIHAAPSLETFYLTVMQRYV QNVSIFAHPADLRSIREEQHHSLKSVRVTSFISVKSLVELTCHILESTTSLECLTLDA SQTGFRCDTPGSKIGKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTVKLNVLEPCSCH CTEL</aaseq>

Gene Sequence

<dnaseqindica>1..70#884..984#1474..2313#2399..2545#2641..3021#atggggatgctgaatctgatgcgcctcatgtccgtcaagcgccgccgccgccaagtccaagttccccatggtaaaagaacaccatctccttccttattttttcgattatttgaatctgtatatatctatagtatgtacacaaacaaacagaaccaaaaaacaaaagattttactgttgttaagtggtaccaatttttttttaactaccttcatcccaaaaatataaaaaattagtaatggatgagacacatttttttttccagattaatacgtttttatattttgggacagatagaatagtacaaattttcatacctcagagtatcagatataccatcttattaaaaacttgagcatcataaaaagacatgtttttattgagtgcaaggtaggagatcaaaagaggtggtttatctatgatcacaatggctggtggcctccaccttcttgttccttttgctatttaactagattgacccgacgtacatgggtagagaccatactatttattatgctatgtaaaatatgaaaaaaaaaactatatacatgctgaacttcaggttttccccttaagttgataacaagttggtttcttttacaaaactgttagtattgttgcacaaaaggggacaacagaagaaaacaaagataacggattgccatgtgtgcgatggtgtgcttgcttgagttttctgttttattactcaaatgtatgtaaaccaatgttttcaaaatcgctaatgtggcataatcagatgcttatatggtataatcggccacttatatgacttgagtagtataaggttggcgcatccgttccttgtacacggccttgtaaagcttttttaaaacactgatgtaaaccatgcatcttgtgctgcagatggattgattgccttacgggctaaaagaaagtgttcaccctgccaacaagatggcgattctcagggcgctgctgacatagagataccagaccttccagaggtacaccataaataaaatgttgatgatgaaacatcttactagtagtagtgtagtgcaagtaaattatgacgattactgcttcaattgcacaaattggtccaccaacgctattaaagtttatgaacggagcactttgatgctgtaacctcctacagccctgctgcattggaatcttctttgttttgctgccattgaatagcaacatgctattagacaattaaacatcattccatccattctttctggcacaaatgcaaagaaacaaatatgtgctgagcacttaacacctcatttgggtaaagaccatatttgcctagaagaattcaactatacaattcatagtacaatagtacataatcaggcaggtagcattggaccggttaaggtgttactccataagttatcctttctttcttccatctaattcaaccatttgtcttcacaattagtacaatgtttaacttctctcccatatgcttgtgcaagcaggacatctggcgtcttatacattccttgatgccaatgcgagctgctgcccgagctgcctgtgtgtctcgttcctttctaagttcctggagatgccatcccaacctcaatttcagtagtgaagcatttgggttgaatagaaatgcatgtggaaaggaagaattggctggacttttctacagcaaagtcgaccacattctcaaaaggcactcaggcatcggcgtgaaaaaacttacgattaaggtatattcagattatagtgggaagggctcttcatatctcaacaattggcttcagattggtgttaaaccagggattgaagaactcataatttcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttggtggcttaagaagtctgacgagattgtatctctgttgtgtgcgtattacggagaacgagttaagctgctttctttcccattctcttgcattggagcagttggaaatcaggtactgcgataggattgtttgcctgaaggtaccttgcctactgcagcggctcatctccctgaaggtgtttgggtgcgacaatctgaaactgatagaaaatgaagctcctaatgtctccatttttgcatttcaaggggacaaaacgcaactgaaacttggagaaactttgcaaatgaagagcctatgcatggttcgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccatgaagtcattcaaagaggtatgagaaattttgcctgacacatgaatgagactagattctgtcttatgggttgtagcataattaatttgacctctttatgcagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattgcccttattggatatttcccagcctatgactatttgtccctggcttcttatattcatgctgcaccttctctggagactttctacctgactgtgagttgccattcatatattattactgctatgaatgaaaattagtagttgtgtggtggaaatgtcacttaaaatttctccctttcacatcctaggtaatgcagcggtacgtgcagaatgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagcagcatcacagccttaagagtgtgagggtcacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgagagtacaacttcccttgagtgcttgacattggatgcttctcagactggttttaggtgtgatactcctggcagcaaaattggcaaatgccccccactagatagggacattatcatggaaggtcacagaggggtcttggctatcagaagatacatccagcctagggtaccttccacagtgaagctgaatgttttggagccctgcagctgccattgtactgaactttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0142100, RefSeq:Os06g0142100