Os09g0488800
| Gene Name |
Os09g0488800 |
|---|---|
| Description |
Retrovirus capsid, C-terminal domain containing protein |
| Version |
NM_001070067.1 GI:115479876 GeneID:4347434 |
| Length |
2411 bp |
| Definition |
Oryza sativa Japonica Group Os09g0488800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:19506886..19509296 |
| Sequence Coding Region |
19506886..19508427,19509006..19509296 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:19506886..19509296 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:19506886..19509296 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggccgccgcagccgaggcgttcggcacggcggcggcgacgtcgacgccgccggtgcaggcgacgcggcaggacgtgcaggccgccatcgccaaggcggtcgagctgcgggcgctccacgccgcgctgctgcagcgcggcggcggcggcgtaggcggcggcgccagcgccagccgcagcccggccatcatccgcctcccgccggccgcgtcccccgcgctctccagggcgggggcggcggcggcggcggtggccaccgtcgacgaggactacccggtgtttactccggcttacgatgaggagcaaatggccggactcagccacatttgccaggacaaccggagccggtcggagaactggagcggcatcgcgttgggcggcggcggcagcggcgacgacgacgacgacgcggccttctccgactacgacaacctcaacgccttctcgtcctcgaacagcgagctccgcttcccgtcgtccaccgaccatcaccggcggcacaaggtccacccggcgttcttgcactccgcgccgtcggccgaccgtttcctcgcgtcggcggggagggcgaccatggccggcacggcggagctgctcaaggcgccgtcgacgtgcggcagcgcgttccggccggcgacgatcggccgggaccacggcatcgacgtcggggccctcaagttcctcgccagcagcggcgcgccgctctcggcggcggcggcggcggcgcagccccggccggcgaagcacagaagggcgcagatcctctcgtggctcttcccgagggcgaagaagaaggcgaagccgatgtcgccgagcgccatcgagcgggagaacatgtcgcagctgctcaaggagtgggggttgctgtcgctcgactcgctccggcgagagctcgccgacgcgaacgcgcaccgcgacgccgcgctgcaggaagccgccgagatgaggtcgtccctgggagagctcaccaccaagctcgccggcctcgaggcctactgctcggagctcaagaaggcactgcgactagcgacgagctcaaccagcaacgctcaaccatcatcatcctccatgtcgaggagatcaacgcgatcgatcggagcaagccaggagctcccggggccggtcagccatgaagccatggtggaaggcttcttgcagatcgcctccgaggcgcggctttcggtgaagcaattctgcaaggcattgatccagcaggtcgaagaacctgacaatggtttgatagaaaaactaaacattcttctccaaccttaccagctcatgatcactgacaacaagcattgctccaagctggtgctgtaccatctggaagctctgatgaaccaggcaatgtaccaggacttcgagaactgcacgttccagaagaacggctcgccacggtgcctcgatcccaagcaaggatcccaggagagcttcgcctccttcgtcgcactgcgcaacctgagctggaacgaggtgctcaggaagggcaccaagtactacagcgaggacttcagccggttctgcgaccagaagatgagctgcattgtgtccaccctgaagaattggtcccggccatggccggagcagctgctgcagtgcttcttcgtcgctgccaagtgcgtctggctgctccacctcctggccttctccttcacccccgcgctgacgatcatgcgggtcgaagagagccgcgtattcgatcagatgtacatggaggacatcctacctgacaagcagcagctgcacaatccttgtcaggtaaagatcatggtaatgccggggttctatgtccaatatcgagtgctcaagtgtagagtgctcacaacttga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAAEAFGTAAATSTPPVQATRQDVQAAIAKAVELRALHAAL LQRGGGGVGGGASASRSPAIIRLPPAASPALSRAGAAAAAVATVDEDYPVFTPAYDEE QMAGLSHICQDNRSRSENWSGIALGGGGSGDDDDDAAFSDYDNLNAFSSSNSELRFPS STDHHRRHKVHPAFLHSAPSADRFLASAGRATMAGTAELLKAPSTCGSAFRPATIGRD HGIDVGALKFLASSGAPLSAAAAAAQPRPAKHRRAQILSWLFPRAKKKAKPMSPSAIE RENMSQLLKEWGLLSLDSLRRELADANAHRDAALQEAAEMRSSLGELTTKLAGLEAYC SELKKALRLATSSTSNAQPSSSSMSRRSTRSIGASQELPGPVSHEAMVEGFLQIASEA RLSVKQFCKALIQQVEEPDNGLIEKLNILLQPYQLMITDNKHCSKLVLYHLEALMNQA MYQDFENCTFQKNGSPRCLDPKQGSQESFASFVALRNLSWNEVLRKGTKYYSEDFSRF CDQKMSCIVSTLKNWSRPWPEQLLQCFFVAAKCVWLLHLLAFSFTPALTIMRVEESRV FDQMYMEDILPDKQQLHNPCQVKIMVMPGFYVQYRVLKCRVLTT</aaseq> |
| Gene Sequence |
<dnaseqindica>870..2411#1..291#atggcggccgccgcagccgaggcgttcggcacggcggcggcgacgtcgacgccgccggtgcaggcgacgcggcaggacgtgcaggccgccatcgccaaggcggtcgagctgcgggcgctccacgccgcgctgctgcagcgcggcggcggcggcgtaggcggcggcgccagcgccagccgcagcccggccatcatccgcctcccgccggccgcgtcccccgcgctctccagggcgggggcggcggcggcggcggtggccaccgtcgacgaggactacccggtgtttactccggtgagcgagcttttcttgcgtacagtcaccctgtcactgctatctttgatgctgccatggcgatgtgccttcttggttcatctcttctcgttttcaagggtcattcgttggtgatgaacttgagccattcattagttctccttaacttgcatgctcttcttgctgctagcatgttcttcctcttcttgacagctaatcccagatgctcctactattactctgcaattaataggacatgtaatgcagttaagcaacagtaaaagttgcgttatctcagattcttttgatgtcacattctcacctttttctgaaagaagcttgatgacacatctgtggagtaatctcttgctgtgctttaacctatagcagcaacctgtactttgccttggtaaatggtaaaaattggaaactttcagtagcaactccatgcagattgcagaaatgtgggttgcaatgtgccattctgtttggatttcttcacttttttttttcaatctcactgtccctgaatttgttctgttcttttgcaagatttttttggctaatttttggcttgaatttcttgttaaattggtcaggcttacgatgaggagcaaatggccggactcagccacatttgccaggacaaccggagccggtcggagaactggagcggcatcgcgttgggcggcggcggcagcggcgacgacgacgacgacgcggccttctccgactacgacaacctcaacgccttctcgtcctcgaacagcgagctccgcttcccgtcgtccaccgaccatcaccggcggcacaaggtccacccggcgttcttgcactccgcgccgtcggccgaccgtttcctcgcgtcggcggggagggcgaccatggccggcacggcggagctgctcaaggcgccgtcgacgtgcggcagcgcgttccggccggcgacgatcggccgggaccacggcatcgacgtcggggccctcaagttcctcgccagcagcggcgcgccgctctcggcggcggcggcggcggcgcagccccggccggcgaagcacagaagggcgcagatcctctcgtggctcttcccgagggcgaagaagaaggcgaagccgatgtcgccgagcgccatcgagcgggagaacatgtcgcagctgctcaaggagtgggggttgctgtcgctcgactcgctccggcgagagctcgccgacgcgaacgcgcaccgcgacgccgcgctgcaggaagccgccgagatgaggtcgtccctgggagagctcaccaccaagctcgccggcctcgaggcctactgctcggagctcaagaaggcactgcgactagcgacgagctcaaccagcaacgctcaaccatcatcatcctccatgtcgaggagatcaacgcgatcgatcggagcaagccaggagctcccggggccggtcagccatgaagccatggtggaaggcttcttgcagatcgcctccgaggcgcggctttcggtgaagcaattctgcaaggcattgatccagcaggtcgaagaacctgacaatggtttgatagaaaaactaaacattcttctccaaccttaccagctcatgatcactgacaacaagcattgctccaagctggtgctgtaccatctggaagctctgatgaaccaggcaatgtaccaggacttcgagaactgcacgttccagaagaacggctcgccacggtgcctcgatcccaagcaaggatcccaggagagcttcgcctccttcgtcgcactgcgcaacctgagctggaacgaggtgctcaggaagggcaccaagtactacagcgaggacttcagccggttctgcgaccagaagatgagctgcattgtgtccaccctgaagaattggtcccggccatggccggagcagctgctgcagtgcttcttcgtcgctgccaagtgcgtctggctgctccacctcctggccttctccttcacccccgcgctgacgatcatgcgggtcgaagagagccgcgtattcgatcagatgtacatggaggacatcctacctgacaagcagcagctgcacaatccttgtcaggtaaagatcatggtaatgccggggttctatgtccaatatcgagtgctcaagtgtagagtgctcacaacttga</dnaseqindica> |
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