Os06g0143000

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0143000| Description = Iron-superoxide dismutase (EC 1.15.1.1)| Version = NM_001063309.1 GI:115466349 GeneID:4340091| Length = 4113 bp| De...")
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Gene Name

Os06g0143000

Description

Iron-superoxide dismutase (EC 1.15.1.1)

Version

NM_001063309.1 GI:115466349 GeneID:4340091

Length

4113 bp

Definition

Oryza sativa Japonica Group Os06g0143000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2255887..2259999

Sequence Coding Region

2255917..2255988,2256849..2256932,2257030..2257218,2257399..2257570,2257720..2257793
,2257887..2257913,2257984..2258007,2258109..2258234

Expression

GEO Profiles:Os06g0143000

Genome Context

<gbrowseImage1> name=NC_008399:2255887..2259999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2255887..2259999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctttcgcctccgctctccgcgttctcccctcgccgccggctgcggtgcctcgtcggcttcgctcgagagaacaaaggcagggctgtagatctcgaaggtattcaaaagtcgtggcttactacgctctcactactccgccgtataaacttgatgccctggaaccttatattagcaagaggacagttgaacttcactggggtaagcatcagcaagactatgtggatagcttgaataagcagcttgctaccagcatgttctatgggtacactctggaggaactaataaaagaagcatacaacaacggcaacccattaccagaatataataatgcagcacaggtatggaaccatcacttcttctgggaatcaatgcagccagaaggtggtgggtcaccagggcgaggtgtcctgcagcagatagagaaggattttggctcttttactaattttagggaagagtttatacgctcagcattatcacttttggggtctggctgggtttggcttgtcttgaagagaaaagaacgaaaattttcggtagtccatacacaaaatgccatcagtccacttgcacttggtgatattccactcatcaatctagacttgtgggagcatgcttactacttggattacaaggatgacaggcgaatgtatgttacaaactttatcgaccatcttgtctcttgggatactgtcactctacgcatgatgcgcgctgaggcttttgtgaaccttggtgaaccaaatatcccagttgcatga</cdnaseq>

Protein Sequence

<aaseq>MAAFASALRVLPSPPAAVPRRLRSREQRQGCRSRRYSKVVAYYA LTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKEAYN NGNPLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVLQQIEKDFGSFTNFREEFIRSA LSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGDIPLINLDLWEHAYYLDYKDDRR MYVTNFIDHLVSWDTVTLRMMRAEAFVNLGEPNIPVA</aaseq>

Gene Sequence

<dnaseqindica>31..102#963..1046#1144..1332#1513..1684#1834..1907#2001..2027#2098..2121#2223..2348#agcgcggcagaggaaagaggagaagaaaagatggcggctttcgcctccgctctccgcgttctcccctcgccgccggctgcggtgcctcgtcggcttcgctcggtgagctcctcgtcgcgaaacccatggataccttcttcttctttctgccccttgctcgtgcgctcgctggaagctttctcatttggcgagctgccttgttcttcgatttgtgacttgagatttgataaaagggataggaaggggaagggagacactggcatttcaaagagttagacgtttggaattcgagggcattgcaggttttttccttgcagattttaggatagtgcgaatttgaggactttaaatcgattaataattgattatgagtggcactataatcttttgtaccatattattatcggtctcaaacatgacaccgctaaagatcatgtgtgtctgtgatgttacaaatcaatatactatttgataagttagtgatcctttatggtggatattcagcttttgtgagtaatttttcaagccctagttttttaagaacaggtttgtataggtggtgggtctatgtagtgtcatataatctcattgtagttagacaagatcgtttctctatgttgttggtattcaccacggtaagtcagccacgtctcatttttcttccatcttccactgtgcatatgcagtgtaagatgtttaatgtttctttgtgttaaatttggtgaactgtgccagtttccatgataatccgtgtcatgcttgcgtagtgctcaagcaatgctaaagagagcttaggattgtgtgtatcacgctgacactgggcttagcaaccaatgttctattgtgaagttggaatgacattacaagctttgaagattgtacctcagcttttgtaattctacgggcccttgactatgatgtttagtgctggttgcaatctttacgccttctgtttgttgcagagagaacaaaggcagggctgtagatctcgaaggtattcaaaagtcgtggcttactacgctctcactactccgccgtataaacttgtatgttctcctcacctgttaatattgcctcgacagattacattctgccatttaaaaggaaaagattttaacttatagcttgtcctatggtgtccaggatgccctggaaccttatattagcaagaggacagttgaacttcactggggtaagcatcagcaagactatgtggatagcttgaataagcagcttgctaccagcatgttctatgggtacactctggaggaactaataaaagaagcatacaacaacggcaacccattaccagaatataataatgcagcacaggtaatgttgttattatttggcttttttcccccattagttggatattttatttgtacccatcaaattttcatcctgatagcttcagtgtacatgtttaattgttgcacataactgaaagcctgaaaaaaggatgagcagtaggcttattatggttctaattttcaatcttctgaaatacaggtatggaaccatcacttcttctgggaatcaatgcagccagaaggtggtgggtcaccagggcgaggtgtcctgcagcagatagagaaggattttggctcttttactaattttagggaagagtttatacgctcagcattatcacttttggggtctggctgggtttggcttgtctgtaagttttttattttcattttctttgaagttcagcctgtacaggcactgttggttcaatctgacttcctgaaatgttgtttctacaatctaaatttagtttttaaagtctgatttatacacgtctggtctatcttttgcttgtttcagtgaagagaaaagaacgaaaattttcggtagtccatacacaaaatgccatcagtccacttgcacttggtgatattgtatgttttctcatttccttttgaaatgtttagaataatagcatcccaagtataaacctttgtgatgacattccatgccctcttctcttgcagccactcatcaatctagacttgtgggaggtaaggaaatgacactgcgtttagatattacattatgctaaatattgacatatctacttttgtgtttcagcatgcttactacttggattacaaggtattttctagatcctctttttcttcttatacctaaaattgtaattcaccaagtactaagctatcataaatcactggtgatgcttccttttgatgcttcaggatgacaggcgaatgtatgttacaaactttatcgaccatcttgtctcttgggatactgtcactctacgcatgatgcgcgctgaggcttttgtgaaccttggtgaaccaaatatcccagttgcatgatatgagatgatatggatatgacctagagatatctatgcatgtattctcatcatgaggtaaaatccagcattttgcaacatcatatctggtacatatgcagcttaattatgtagttcatcattcagtatatatacaaaaagaaactagagaatcattcagtttttggtgatgacttattttcaactatgacgcatcttcagcattagcaatgccagaaatcatgctcctaggacattatcttataacacaaaaaagttttctcttgaaaaacagcacgtgaggcaatcaatcaaatatcgggattgagatttaaacacatgctgctgggagtatcagggagcatgtcgcttgatgctgttgcttcggctgggttaagaaacagaatcaagtgccctcaaagaaacagaaatcgacaatacatgatagcatcttatgacgaattagattgaagaccgtagcagacaagtcagtaaaatttggttgcacaatcgaatctgattattagattgtgcactaatgagtatgaagagcttagtgttaattacttcattgtgtcctcctttacagatatggtcactaaagaaaggacctatacaacttgcatgcaggccgctttaagaaaatagctaatttgtaactgcacttccactaatacttatggtcttatgcacttaacttaatcgaccactcactatgaaactcttagtgaggtatttttcttgagcaagaatgaagttctattactcctttgatcctttcaataattcgtccattttacttatatatgtagagtcctagttcttttgcaaggtttcctaggactttgaagttgtcagtgaactggttccctgtgaaacttttagtcttaattagacatccacaacttcacattgatgctatattcttacaaaaaggaaaattattactaaagctttactagacctatcgctttccatgtcctacggtgagctagttgatgcaatgttcttgcatccagtatatgtcagtgcacaaccgcgtgggtccttattccccaaagtggtcctcatgtctttccttgtaaccacagacagcgacaacttttttgtttttagactctacattgttttgcttgatatgtagcaggagtagactatgctaaaatgtttttatcttgttctctccaattttcagcgacgccgaggaatttctagatcacatgatacctgatgctgagattcgcatgcatgagagacacttacaccacctcatgtcctgcacggtgaaatagtggaaatctgcttgaggataaacagctttggttttatcgtcaccttggaattttgatatagcatcaaagcaaccttgacactagagcatgattacagagtatgggccatcgatctaacttcttcttgaagctgcaccacttcttgcaaacgtttatgcttcagaactaggacccatggtcccattatgctttttagattagatcttcatcctaagtttcgacaactcatagctgtagtttttgtctttcttttggcacagaattctgtcattgttaagcctagctttgttccctctattatgtaacctgacctttatgtccccattgctcattccttttgtcgacattgaattatttgatgcgatattttcgcatccattactaagcttttgctcaaagtcacagcctattagccttcacctccaggttattttatcaaatgaatgtaatggcctttggaaataaagaagcatccttggatggactgtttcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0143000, RefSeq:Os06g0143000