Os06g0143700

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0143700| Description = Similar to Sulfate transporter 2| Version = NM_001063313.1 GI:115466357 GeneID:4340095| Length = 6139 bp| Definitio...")
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Gene Name

Os06g0143700

Description

Similar to Sulfate transporter 2

Version

NM_001063313.1 GI:115466357 GeneID:4340095

Length

6139 bp

Definition

Oryza sativa Japonica Group Os06g0143700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2291665..2297803

Sequence Coding Region

2292080..2292217,2292351..2292427,2292767..2293330,2293987..2294113,2294216..2294332
,2294449..2294556,2296576..2296813,2296924..2297131,2297208..2297255
,2297350..2297737

Expression

GEO Profiles:Os06g0143700

Genome Context

<gbrowseImage1> name=NC_008399:2291665..2297803 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2291665..2297803 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgtcaacaacaaggtggacagcctctcctacgacgtcgaggcgccaccggcgcaggcgccgacgaccccggcggtggtctccgcgccgccgacgccgcggggcgaggcgccggcgatgacgacgacggcggcggcggagctgcacaaggtgtcggtgccggagaggaggtcgacggcgaaggcgctgaggcagcggctggcggaggtgttcttccccgacgacccgctccaccagttcaagaaccagtcgtccgcgcggcggctggtgctcgcgctgcagtacttcttccccatcttccattggggctccgactacagcctccgcctcctccgctccgacgtcgtctccggcctcaccattgccagcctcgccatcccgcagggaatcagctacgccaagctcgccaacctgcctccaatcattggactatattcgagcttcgtgccgccgctgatctactcgttgttgggtagctcgcgggatctggctgtagggccggtgtcgatagcgtcgctggtgatggggtcgatgctccggcaggcggtgtcgccggaccaggagcccatcctctacctccagctcgccttcacctccaccttcttcgccggcgtcttccaagcctccctcggcttcctccggctggggttcatcgtggatttcttgtcgaaggcgacgctgacgggattcatgggcggcgcggcgatcatcgtgtcgctgcagcagctcaagggattgctcgggatcatccatttcacgtcgcagatggggttcgtccaggtgatgcactccgtcttcaagcaccacgacgagtgggcgtggcagaccatcctcatgggcgtcgccttcctcgccgtcctcctcaccacacgccacatcagcgccaggaacccaaagcttttctgggtgtcagcagctgctccactgacatcagtgatcatctctaccatcatctcgttcgtcagcaaagctcatggcatcagtgttattggcgatctccccaagggattgaaccctccttcagcgaatatgctgaccttcagtggctcctacgtaggactggccttaaacacaggaattatgactggcatactatctctcactgaagggatagcagtaggcaggacatttgcatccatcaacaactaccaggttgatggaaacaaggagatgatggccattggtgtcatgaacatggctggctcatgtgcctcctgctatgtcaccacaggatcgttctcgaggtcggcggtgaactacagcgcggggtgcaagacggcggtgtcgaacatcgtgatggcgtcggcggtgctggtgacgctgctgttcctgatgccgctgttccactacacccccaacgtgatcctctcggcgatcatcatcaccgccgtgatcggcctcatcgacgtccggggcgccgccaggctgtggaaggtcgacaagctcgacttcctcgcctgcatggccgccttcctcggcgtcctcctcgtctccgtccagatgggcctcgccatcgccgtcggcatctccctcttcaagatcctcctccaggtcacccgcccaaacatggtggtcaagggcgtcgtccccggcacggcgagctaccggagcatggcgcagtacagggaggccatgcgtgtgccgtccttcctcgtcgtcggcgtcgagtccgccatctacttcgccaactccatgtacctcggcgagaggatcatgaggtttctccgggaggaagacgagcgggccgccaagtgcaaccagtgccctgtcagatgcatcatcctcgacatgagtgctgttgcagcgatcgacacgagtggcctcgatgcacttgcagagctgaagaaggtgctggaaaaaagaaacatcgagcttgtgctggccaacccggttggatcggtgaccgagaggctgtacaactcggtggtcggcaagacgttcggctcagaccgcgtgttcttcagcgtcgccgaggccgtcgcggcggcgccgcacaaaacacagccctga</cdnaseq>

Protein Sequence

<aaseq>MVVNNKVDSLSYDVEAPPAQAPTTPAVVSAPPTPRGEAPAMTTT AAAELHKVSVPERRSTAKALRQRLAEVFFPDDPLHQFKNQSSARRLVLALQYFFPIFH WGSDYSLRLLRSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGS SRDLAVGPVSIASLVMGSMLRQAVSPDQEPILYLQLAFTSTFFAGVFQASLGFLRLGF IVDFLSKATLTGFMGGAAIIVSLQQLKGLLGIIHFTSQMGFVQVMHSVFKHHDEWAWQ TILMGVAFLAVLLTTRHISARNPKLFWVSAAAPLTSVIISTIISFVSKAHGISVIGDL PKGLNPPSANMLTFSGSYVGLALNTGIMTGILSLTEGIAVGRTFASINNYQVDGNKEM MAIGVMNMAGSCASCYVTTGSFSRSAVNYSAGCKTAVSNIVMASAVLVTLLFLMPLFH YTPNVILSAIIITAVIGLIDVRGAARLWKVDKLDFLACMAAFLGVLLVSVQMGLAIAV GISLFKILLQVTRPNMVVKGVVPGTASYRSMAQYREAMRVPSFLVVGVESAIYFANSM YLGERIMRFLREEDERAAKCNQCPVRCIILDMSAVAAIDTSGLDALAELKKVLEKRNI ELVLANPVGSVTERLYNSVVGKTFGSDRVFFSVAEAVAAAPHKTQP</aaseq>

Gene Sequence

<dnaseqindica>5587..5724#5377..5453#4474..5037#3691..3817#3472..3588#3248..3355#991..1228#673..880#549..596#67..454#aagcagccaaggcgcctcccttcctaatcctacctcgatcgcctcctccctctcgactcgatcgccatggttgtcaacaacaaggtggacagcctctcctacgacgtcgaggcgccaccggcgcaggcgccgacgaccccggcggtggtctccgcgccgccgacgccgcggggcgaggcgccggcgatgacgacgacggcggcggcggagctgcacaaggtgtcggtgccggagaggaggtcgacggcgaaggcgctgaggcagcggctggcggaggtgttcttccccgacgacccgctccaccagttcaagaaccagtcgtccgcgcggcggctggtgctcgcgctgcagtacttcttccccatcttccattggggctccgactacagcctccgcctcctccgctccgacgtcgtctccggcctcaccattgccagcctcgccatcccgcaggcacgcacgcaacctgatcacacatacacgccattgttttgcctcctgaaattctccattcccaattccaattcgaattccgatttctttgcagggaatcagctacgccaagctcgccaacctgcctccaatcattggactatgtaagtaaaagatgaaccaaaatgaccggccattatgtcaattcgatgtgatgaataacacatatgatgtatgcagattcgagcttcgtgccgccgctgatctactcgttgttgggtagctcgcgggatctggctgtagggccggtgtcgatagcgtcgctggtgatggggtcgatgctccggcaggcggtgtcgccggaccaggagcccatcctctacctccagctcgccttcacctccaccttcttcgccggcgtcttccaagcctccctcggcttcctccggtattcgatcacttcacatccatcatctactgttccattgacgatggatcgatggatcgatcacctcatgcctagctaactgatggagtatatcgtgttcttggttttaggctggggttcatcgtggatttcttgtcgaaggcgacgctgacgggattcatgggcggcgcggcgatcatcgtgtcgctgcagcagctcaagggattgctcgggatcatccatttcacgtcgcagatggggttcgtccaggtgatgcactccgtcttcaagcaccacgacgagtgggcgtggcagaccatcctcatgggcgtcgccttcctcgccgtcctcctcaccacacgccacatcgtaagctaatagctaccacaccttcctagtagcgtatcacctgcagagatgatgcatgctctcttgattgattagttaattattgcctgttcttcgctaatcgcgtggtgattagaaggtaatcagggggttaattgctattactatttatagaaagttccgcagaaatggctaggcgccaaaatagtaagggaaccacaattaatagccacacgtatgaaatgcgtggggatcagggatgcaagcatgtcgacccatgaacctgcgtacaggttatttaaatgttgcgcctaatagaacaatctagatatttagtgattcacaagtaaagtgattttatagttcttaagaaggtattagaagataccatattttttaatgtaaaatttgatacatcttgatatcttcgatactaatagataccaaaatttacactaaaataatcgatacctcttggtatctctcaaggatcgtaaaagctggcctgccttgcctgtataagtaaaaatgtaatgagacctgccgttgtaaattctgagacaatggaagagtacagaacactttcggctaggggcagttatgagcaggactaaatggttattgttagttaattagtcggcaaaattctttataattatttgaccatggttaaagacaggtaacttatctatagctaggaaagatagtatggcaaaaaggaaaggtggtgattaaaaccattacaaagtgagcttcatggaggggcccaaagggtgcttgccactaacaaggaatttgactccactcagttaaactaatggccaatagttaatggaaggtgaagttaagctacctccagcttatagggatctcataatgatgggatattttgatttttcctaaaggaattccattcacataattgattgtcgcgaaattcgaatatcttactttagtagttgggtggttttcttaattaggggatcacataaaagttcctcaattttttcaaactgtttaaacttatttaagctagtatagtactactttagggtaatctaaaaacttctttagacttgcttaataaacagttgctatgccaagaaaaagtcatgtcttatgcctaatcttccaagatatctgaacgttggactaacacatggtgtctaaaaagttagtgttggcgtgtgaccagaagtatttaaggttgttaattgcataattgtgaaaggagtttataataatatttactccccttacacttgcagaaaagcactaattcttttagtaattaattaatcgatcatgtgtacaaaaacatatgtcatgaagcactctaactagtatgatgagcagttctagtttggatgatctcacaaactaaacaaaaacaaagaatgtttatatcttgcattagtcttaatacgattagaccatatacatcaattaaagcaaggcgtgtgtgtggctttagaatatattctaataaagccattttcaattggaacatttctcttttcccttttgggaagaatggatctggtttggccactctgacgtgtcacctgttaagctggttgttcacatgctcatctctctgaatttcggtgtcttttcagtctaaacagaatgatctgataaacacatccattagactgttaatggttttcctctgagaaaagtaagtcatctgctttgtaatgacgctgttcctcacctggaatgattaaaaagtgtcaattaatgcgacaattccacggtcatgggaccatctcagaacaattcttcagaagatgtgaggagatggggcctgccaaattaataggttttaaccagaacttcttttcatttgtgattcaagatctactgaactctttttataaaaattaaaaaaaaatatgtactgaattcattatgtgaaccgctgttgtggttgccaataatttttttaccttctgattcttcagttcgctgtatacaattttctctgactttgatgcgagtatgcagccggtaacaattttcactgtatttttgcagagcgccaggaacccaaagcttttctgggtgtcagcagctgctccactgacatcagtgatcatctctaccatcatctcgttcgtcagcaaagctcatggcatcagtgttgtgagtagcttctctaaaccatttctgaatctttcatggacagcttcacatcgagaacatgaaagaaacgtcattagtcacactaattcatctttttttgggtggtgtttggacagattggcgatctccccaagggattgaaccctccttcagcgaatatgctgaccttcagtggctcctacgtaggactggccttaaacacaggaattatgactggcatactatctctcactgtaaggcacctacataaaaaacacattttatttactatctgaactattttagtatggtgatgtttagtctgaacatgaaaggaaaaatgactgaatttgcaggaagggatagcagtaggcaggacatttgcatccatcaacaactaccaggttgatggaaacaaggagatgatggccattggtgtcatgaacatggctggctcatgtgcctcctgctatgtcaccacaggttggtttgtcagttgcaccatagcttctgaacgtattaagtacttgtcgttttagataaaattagatcaaacctttaaaattctgaccatcagtaatttcttaaatgcatagttcaaaaccaaaacaaacgatatagtatatagatttgcctcgaaaagtaattatcatagtattataaaatgtttatattttataaatttactctaacataaaattagctgtcaaaatttcaaaagtttgaccaaatcttatacgataagtatcttttgaccggaggtactctaacttgttcaagtttgtttaagtttacagaaaattttaacaatatttttaatataaaataaatatgttatcaaaatatattcaacgttacattcaatgaaactaattaattcaatattatagaaaaagattgactaaaaaaaatcaaaacgacttataatatgaacggaatgagggagtaatattcatatttagataatggaaatggattatatctccggcttctgtcatgagatgcacaacaaaaaaaaagacaaagataaaaataaatcaaaatgagaaataaaatgatgtgagtaatattcatagaagctagatgaggatcgcaatggctcaccattggcaaaaaaaactctgaatgaatggacgcaggatcgttctcgaggtcggcggtgaactacagcgcggggtgcaagacggcggtgtcgaacatcgtgatggcgtcggcggtgctggtgacgctgctgttcctgatgccgctgttccactacacccccaacgtgatcctctcggcgatcatcatcaccgccgtgatcggcctcatcgacgtccggggcgccgccaggctgtggaaggtcgacaagctcgacttcctcgcctgcatggccgccttcctcggcgtcctcctcgtctccgtccagatgggcctcgccatcgccgtcggcatctccctcttcaagatcctcctccaggtcacccgcccaaacatggtggtcaagggcgtcgtccccggcacggcgagctaccggagcatggcgcagtacagggaggccatgcgtgtgccgtccttcctcgtcgtcggcgtcgagtccgccatctacttcgccaactccatgtacctcggcgagaggatcatgaggtttctccgggaggaagacgagcgggccgccaagtgcaaccagtgccctgtcagatgcatcatcctcgacatgagtggtaataagctcttgcatgctactactcctgtacagaattcatactcagttaaaaaaatgctgaaaagagtggttaattattcagtaaattaaaactgacatggatcgatgagctaattattcattcagtacaacgttctcagaaagattgtagtacaatcttgatcagtaaaaagattctcagtaaaaagagttgttaattattcagtaaaaactcacatggatcgatgagctaactgttcagtaaaaagagcagctaattattcagtataacattctcagaataatagtactatcttgtgatcagtacaaactgacagagaattcgatgaacttgcagctgttgcagcgatcgacacgagtggcctcgatgcacttgcagagctgaagaaggtgctggaaaaaagaaacatcgaggtaatagaacttctgaaacatctatctaccaatgttcttcttgtcagtttcagtgatttactatcagataatattcagatttgtcagtgacagtgaatagtaacatgagctaatttctgacggatttctgcagcttgtgctggccaacccggttggatcggtgaccgagaggctgtacaactcggtggtcggcaagacgttcggctcagaccgcgtgttcttcagcgtcgccgaggccgtcgcggcggcgccgcacaaaacacagccctgacaagagcagagatgtgctttgctaccagtagatccagcagaagcagaagtactctctgaccagcagaagcacagtagaacaaggtgcttctcggaggaggctaattaaaattaagaatcttaagatagaagcgtagaacaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggtggtaaaaaacaagtctatgggctgttaatttgttcgcgtgttgtgtttaattaggggggattatggtagtgcagatgggaaataactccgggtgctgatctcttctgatcgagttggaagagtttttgaagcatgtaaccagaatgcgtggcgtgtatggtgtagcttgtgatttggtagttgttgcaaagtaatccttaatggaatcgggttttgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0143700, RefSeq:Os06g0143700