Os06g0144000

From RiceWiki
Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0144000| Description = BRCT domain containing protein| Version = NM_001063315.1 GI:115466361 GeneID:4340098| Length = 4539 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0144000

Description

BRCT domain containing protein

Version

NM_001063315.1 GI:115466361 GeneID:4340098

Length

4539 bp

Definition

Oryza sativa Japonica Group Os06g0144000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2328884..2333422

Sequence Coding Region

2329121..2329285,2329397..2329585,2330415..2330526,2331404..2331483,2332031..2332141
,2332589..2332675,2332988..2333287

Expression

GEO Profiles:Os06g0144000

Genome Context

<gbrowseImage1> name=NC_008399:2328884..2333422 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2328884..2333422 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgaatcgagctcagatcctaacaacgggagaggaaagtcatccaagaggaatctcccttcttggatgggttcgaaagacggggaggaaaatccaggcaagaagaagcacatggccacccacgagaaggtgcagaaaggatcggatttctccaaacttttggatggggtggtctttgtactttcagggtttgtgaaccctgaaagaggcacattgcgctcccaagcattggatatgggagccgagtatcgacccgattggacatcagattgcacacttctcgtttgtgcatttgccaatacccccaagtttcgacaagtcgaatcgaacaatggaaccattgtctcgaaggactggatcttagaatctcacagccaaagaaaacttgttgatattgagccttaccttatgcatgttggaaaaccgtggagaaaaaataaagagctagttgaatctgacgaagatcagaagaagccacataaagagcatcagaagcaagttgatcgatctcatatcaagacatctccctctgcaggcatagaggcaaaacattcagatgttactagtaagcaattttctccaacaaaaataaaacaatgggcaaagaatgatttagcacagacaatatcatggttagagagccaagaagagaagccagaaccaaatgagttgaaggcaatagctgctgaaggggttatcacttgtttgcaagatgccatagaatctctcaagcaagggaatgatgtcaagggagtggcggagcagtggagctttgtcccccatgtcatcaatgaactggcggaacttgatggaagaagaaaagagggatcgttatcgaaagaacaactctcccagctagcaatcaaatgcaaaaagatttatcaggctgagtttgcccacatgcatgataatgacaagaagcatcagagcaagcctagatcagatgatgctcagtatgacagtgatgacaccatcgaaatgacggaagaagagattgatctcgcatgcaggcaactccctggggtatgcgggaggcagtag</cdnaseq>

Protein Sequence

<aaseq>MPESSSDPNNGRGKSSKRNLPSWMGSKDGEENPGKKKHMATHEK VQKGSDFSKLLDGVVFVLSGFVNPERGTLRSQALDMGAEYRPDWTSDCTLLVCAFANT PKFRQVESNNGTIVSKDWILESHSQRKLVDIEPYLMHVGKPWRKNKELVESDEDQKKP HKEHQKQVDRSHIKTSPSAGIEAKHSDVTSKQFSPTKIKQWAKNDLAQTISWLESQEE KPEPNELKAIAAEGVITCLQDAIESLKQGNDVKGVAEQWSFVPHVINELAELDGRRKE GSLSKEQLSQLAIKCKKIYQAEFAHMHDNDKKHQSKPRSDDAQYDSDDTIEMTEEEID LACRQLPGVCGRQ</aaseq>

Gene Sequence

<dnaseqindica>238..402#514..702#1532..1643#2521..2600#3148..3258#3706..3792#4105..4404#gtttttgcgacttaaaaccctctccttgttcttcccaacttcgcaagacgcgattcaatggtggacgagattggagcggcaaagaaggggtgaagaggtgaatcgcccctctcttttctgtaagaatcttggtgtccttgatttggttctgtgcgtgttcggagtggattttaaccagagtttcttccgtgttgaattgttctgaacagtgagttcttggtcaggttcgtagtcagtatgcctgaatcgagctcagatcctaacaacgggagaggaaagtcatccaagaggaatctcccttcttggatgggttcgaaagacggggaggaaaatccaggcaagaagaagcacatggccacccacgagaaggtgcagaaaggatcggatttctccaaacttttggtacttattatctaaaccctctggcggtctaatcacaactgaaccgaatatatgttgttcttgatgtatgtatgtatggctgaggcgattccatgtgtttgttttgggcaggatggggtggtctttgtactttcagggtttgtgaaccctgaaagaggcacattgcgctcccaagcattggatatgggagccgagtatcgacccgattggacatcagattgcacacttctcgtttgtgcatttgccaatacccccaagtttcgacaagtcgaatcgaacaatggaaccattgtctcgaaggtggatccttattttagccgttcttgttagctttctttaatatagttatataatttatatcagaaggacactgatatttcacttatcctaaaaactagaattactatgcatgctaccatatatactaatacagtgcacgacagagttgacagaatattacctttattttcattgattctttactgcagcaaaaagttcttcctacttgatgccatgagttctagattgatgcacttttaacttctgaatagttaaccactgctctgcaatatgaccaactgaccaaaattccatttagaaattagaatgccaagaaagaacacaaagtcacatacagatcatgttaacttgcatcttccatcgcaatagttccattgcctccacctggtctttcagtctgaaacataggattgcaaataggaatatagtatattcttttttgtacactgtggcgccttgggtactagcttgtactgttttgtttctgttcaagagaagccatgtgccattaaaagccagtctgttcagcaatgccacgtataaagattgcagatgttcttccttgtctctgagcaagtaatttgtatcgccttgtccatgttatgcctaaaaatgttaaatgtaaatctctcggcaagttggcaacattaaatacatatcaggaaatcatgctattttatacattggcaatttggtaaacttaaaagattgacctagcatatcgacagaaatcgtaatttaccttgtaataccatgcgctggcagccatcaattaagttgaatttaggattgcttagagaatcacaattgctctctttccttgtttcaggactggatcttagaatctcacagccaaagaaaacttgttgatattgagccttaccttatgcatgttggaaaaccgtggagaaaaaataaagagctagttgaatctgacgaaggtgataactgagtgtcccttatgtttgatgtttatttcatttaggtggtccgttttgcttcacgaaaatctttggagtaacatgaaaactttaaatctttggaatttttctttggtctatggagttaatgatcattttattaatttatcacttattattattaggctgtggtgtccttaatatatgtcttatttctaagttcttatgcttatgggtccttttgaaattcagtgatatgtgctaactgcatgcctatattgtgttgtttatgataataattcaataagaaaaaaactactatccttcatgttactaatgttttggccatttccatgacaaatatattctaaaataaagctaagcatccatcatatttcctctccaagttgaaagaatctaggtttaggacatgttgtagctgcaacatttttttctcgaacgtgcaggagagctgcgcatcattatgttaagaagaagggaaagagtggaaaaggacaaattttagtacaaaaaagggcttgccaaagaaatagaaaagtactacgacattctatggccaaatactactaaggcctttggctcctgtcatacaacataacttggcctcatctctaatatcctacatgatgacattggagactcatagtaattcagggatactcatttattagacatagctttataccgagatgagcgggccagcttctttccctcaatgaagcactgactgatgcctataaactaacttgtgaaagttgagtaatagtggaagctttggagtacttgaatattctatttgtcacgcaacttgaatttgaagtagttaacaaatgtataagctatagttttctaactatgttttgatcttctgttgtagatcagaagaagccacataaagagcatcagaagcaagttgatcgatctcatatcaagacatctccctctgcaggcatagaggtatgttgaaaataaactagtgatatagccacaaggagcgcatatgatttgaatttatgcttggtaactattagctggctgcttgaacagttggacttattcacagtaaactgtataattagatattgactagctggtaaatcaaacatatttccagccaaaacctgaatacttcaattatgtgatgtctttagatgtgcttaatgctagggaagtcgtttgttaattttttagaactatcaacttctgttaaaaaaacatatttctgaaaaaaaatctgtcaacacttcgtttcgacaggaagtcatgtccaatatttttgcctacagactcttctctcaccaaacgtccatgtttttgctctgtttttttaccttgttaaggtggcctaaatcagagaaatggttctagatagaataagatgaatgcagcatgtgttcctgggagcatatcaacatgctcttcttttgtaacaatgaataccttcttcttcttctttttcatgtcttctttctccaacagctaataataatttctttatttacaggcaaaacattcagatgttactagtaagcaattttctccaacaaaaataaaacaatgggcaaagaatgatttagcacagacaatatcatggttagagagccaagaagagaaggtgagcattttatagggttaaaaagtttggtgaaagttgagttacatttttactgctaagttcaggttatatgttccctgaagtaattcaacaagcactgacatatgccctcaggccgtcatgagatcatctgcacttctaatcaatgtccaatgattttctagagagagagaaaacatgtatctgtttggcatttctttgttgttttaggtggtgtgaatggaaattactccagattaagactgttaaggtggactcataaaaatcaaatgtgtattgtgtgtgatgacaaaacgacagcaaataatcttgctatcagttgacaaatgctagtttgtagagcatatctggtagttttttttagtagtttctctgcctttcttagccctctttacagccagagttattcttgattttctatctgactttctttcttcttttctgaagccagaaccaaatgagttgaaggcaatagctgctgaaggggttatcacttgtttgcaagatgccatagaatctctcaagcaagggaatgtaagaatgcaatatccttccttatttaaagggaactgtttgctttatctattactaataaacaaaaactctgatatatccaagtgatctgtggactgagccgctaactttcaataatctaaaatgattgaattccttgttaggagatgccaaaatcttaatctgagtcaaattgtcattataatctagttattcttccattgtgatccttaagagaactcaattcagataatcaacaccaatgtaccaaacataatgttcctttcacacttgttgttactatcagttgaccatggtcaaccttgtatttaggatgtcaagggagtggcggagcagtggagctttgtcccccatgtcatcaatgaactggcggaacttgatggaagaagaaaagagggatcgttatcgaaagaacaactctcccagctagcaatcaaatgcaaaaagatttatcaggctgagtttgcccacatgcatgataatgacaagaagcatcagagcaagcctagatcagatgatgctcagtatgacagtgatgacaccatcgaaatgacggaagaagagattgatctcgcatgcaggcaactccctggggtatgcgggaggcagtagttttaggtccgttcttcagaagatgcagtaagaatactgaatatccatctttcccaatggtgtatgtgtctgggatctggatagctgcatgtgtaaactgaacaaaatatggttaatctagatcaaaattgcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0144000, RefSeq:Os06g0144000