BGIOSGA024940

From RiceWiki
Revision as of 16:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024940

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024940, complete gene.

LocusTag

OJ1513_F02.115

Ensembl Transcript ID

BGIOSGA024940-TA

Ensembl Protein ID

BGIOSGA024940-PA

Length

3110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:790388..793497

Sequence Coding Region

793396..793497,790612..790724),complement(790388..790526

Genome Context

<gbrowseImage1> name=IndicaChromosome07:790388..793497 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:790388..793497 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGCGTGGATGCTCAGCCGCGCCGTGTCCCAGAGGCTTCTCCGCCACCGCTCCCGATCCTTCTGCAGCAGCTTGTCTTCCTCCTCCTCGGGAAAGGTCAAAAGGATCGAACGATTTGATGAATTTGAGGAGATGGTGCAAAGGGAAATTGTTGAGGATGTGGAGAAGGTGGAGAGAGCGAAGACTGAAGATAGAGATTGTATCAACCGGCTGTTGACTTCTTGTGGGATGCCCAAAGGGGAATTTCGAGATAAGCTAATGTGGGGCTGTAATGTTGCTGCCATATTTGTTGCATCCGGTGCAGTTGGGTCATTGATTGCTAAAATTAAAATAGATGGGAGTGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MSAAWMLSRAVSQRLLRHRSRSFCSSLSSSSSGKVKRIERFDEFEEMVQREIVEDVEKVERAKTEDRDCINRLLTSCGMPKGEFRDKLMWGCNVAAIFVASGAVGSLIAKIKIDGSV</aaseq>

Gene Sequence

<dnaseqindica>1..102#2774..2886#2972..3110#ATGTCGGCGGCGTGGATGCTCAGCCGCGCCGTGTCCCAGAGGCTTCTCCGCCACCGCTCCCGATCCTTCTGCAGCAGCTTGTCTTCCTCCTCCTCGGGAAAGGTATCTGTTACCATCATCCTCCTCCCTTTTCTGTTTATGTTTCTGGTGACCGGCGCTTCCAAGAGTATCAAATTATTCCCCTTTCCTCTCCACTACTAGCCCCCTCCCTTTTTTTCTCTCTTCTTTTTGTAATATATACCTAGTACTCGTACTAGTTAGTTTGACAACGGAGTATATATACTACAACTACAACTAAGCCGACCAATTTACCTGTCACTTTTGATTGTTGAGTGAGGATGTGCTAGCTGTTAAAGACGCGCGCCAATCTAAACCAATCTCTTCCTGTGCCTCTGCCTTGCCTTGCTCATTGCCTAAATTATTCAACACTAGTAATTTGCCTGTGCTACTGCTAACGCTACGATAGCATTCAGTAATACAAATTAAACAACCAAAAGAATACAATATATGCTTTTTCAAACAAGCACAAAATAGAAGGATTAATATTAAACACGAGTTATTATTCATGATTCATCAACCATAGCTCCAGGTTCATTTGAAAAAAAAAAACTGCTCCCGGTTGTCCCTAACAAGGACACTATAGAATGTGTTTTATAAATAGCGAAGAACTGAAGTCAAGCGATAGCAATTGCCTCTTAAAATAATCATTTATATAGTATATCCTACAGTACCCTTCGATACTGAAAAATGCCCGAACTCATTAGCATATCAAGGATCAAATATTCTATTCCTCCTAAAAATTCATTTATAGAACTCATTAGTAGGTTTCAAAAAAAAAAGAGAGAACTCATTAGCAGGCAAGGGAACTGAAGAACTGAAGCCAACACACTGAAGACCATCACAATAATCTGATCCAACTTTACTTTTGCAAAAAAACTATGGCAATTATCTTCCTTCATCAACATCCTGCAAATATCCTGGTCAATTTCTTGCCAATGTAAAGAACAGATCAATATCAACCCTTACTAAAGTCATATGCCTTTCAGTATGTCTGCTTGATACAGCAATAGCTCAAAACCAATATTTTCTGCAATTGGCAAATGTAGTTGCTCATGTCATTCCTTTCCAACTTGGCATTTCTCAAAAAAAAAAACACCATACACAGCACATCCGTTGAAATATAAAATTACCTAGCCATTGTCTATTTTCTGCATATGGTGAACAAGCTCCTTTGCGGTGTTTGAGAAATTCTTTAGCCCCTGCAACAACAAACAACGCAACAACAGTAGAAATAAACTGATGGAATGACAAATTCAATAGTACAGACAATACACAAATATTCAGAATTTTGGAGCCCTGTCATTGGTATATATACCACAACATGGACATCCGCTGAGGTGATCTGCATCAGCTTGTTTCAATCAACCTTGCCAGGCTTCTCGATGTACACCGGTCAGCCTTCACGATCAGTAGCATGGTAGCTCTGAGGGTAGTACTCGATCATGTCTTTGAGTTCATCGAACTTAAACTTCTGACCACAACAACCCAATAGTGAATCAAGAACAAACCAAAAATTAATTAGACGTTGTAAGTTGTAACCTATCATCTAAAATGGTCTCTAAATCTCTAACACCTCCCAGATCATGTTAGCTCCAAACTCTTTCCTTTCCATCTCAGCATCTTTGCCCACACTTGCATTATCTTGTTAGGATCGTACTTCCTTGCCTCCAGAAGCATGCATTGCAGTGGGATCAGACAAGACGGAGTTACAATTAGCAGCGACAAGGAAGCAATTGATGGGAAATCGATGTGTTTTTTAGGCAAACCTTAGCATCGGATGGCCACATACAAGAGAAAAAGGAAAAAGATGGCCACATACAAGTCCATCTATATAACCCCTTAAAATGGGTTCTTTTTTTCATGGTGGTTTTGCCTATGGGGAAGCTTTGAGCGGTATTGGCAAATTAAGACGACACTTTGGTGCCTCATTAATTCTCACTCCTTATTTTGGCAAAGGAGGACGACACTGTGTTGACATGGTGGCATTGTTCCGGTAGATTTTAGTGTCTGTTCAAATGTATATCCCACATAAGTAAAACCACAAAGTTCACTTTAGGGGGTTATATCGAAGGTATTGCAAATTCGAGGGTGTAGAGACCTGTTTTAAAGTTTGAAGTGCTAAATGGACTTCTATTCAAAGTTTAGGGAGGATATGTTATAGGAATGATGTGATTTTTGCTTACTTGTTCATGCCGAGTTGCCAACACAAATCGAAGTTAGGAAACTACGTTTATGAAGTACATGTTAAGAATGCAAACATAATACCCATACATGCATCAGTCTCAAATACGTACACCTAAAAAAACAACTACACAGTTAAAAGAAATGTGGGTGTGATTCACGTTAGATCAATCTGCTCTTTTCTTTGTAATAAAAGCATGTGCAGAGAATGCAATCATTTTGAAGAGTTACTAACAGAAAAATATATCTTGCATTGGTAAAGGCTACTCTTATAACTCACTAGATTGCAAAGCGCTATGCAGCACTAGCCCTAACTCTGCTTCTAACTTCTAAGCCCTGCAGTATGCTGCTGGTTCTTTTTATTCCCTAATATACTAGGAAGATATTTTTTATTCCCTAATATACTAGGAAGACATGCTGGAAACAGCTGTTGATGTTGAGTCTATGAATGCTTCTCTCTAACACTAGGAATTCACAACTTCTTGATCAATCTTGTTGTAATTTGATGTTCAAGCTACTGAATGATAATCAGGTCAAAAGGATCGAACGATTTGATGAATTTGAGGAGATGGTGCAAAGGGAAATTGTTGAGGATGTGGAGAAGGTGGAGAGAGCGAAGACTGAAGATAGAGATTGTATCAACCGGTATGTTAGCTTTTGAGTTTAAGGCTTATTATTGTTTTCCACCCTAGATTCACCTTCATATATGTACTGGCATGCATATACACAGGCTGTTGACTTCTTGTGGGATGCCCAAAGGGGAATTTCGAGATAAGCTAATGTGGGGCTGTAATGTTGCTGCCATATTTGTTGCATCCGGTGCAGTTGGGTCATTGATTGCTAAAATTAAAATAGATGGGAGTGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024940